| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347063
Identifier: 29347063
GI number: 29347063
Start: 2043502
End: 2044599
Strand: Reverse
Name: 29347063
Synonym: BT_1653
Alternate gene names: NA
Gene position: 2044599-2043502 (Counterclockwise)
Preceding gene: 29347064
Following gene: 29347062
Centisome position: 32.66
GC content: 36.43
Gene sequence:
>1098_bases ATGTCAGAACAATCAGTAGAAAGGAAACTGGAAGATATGGAGATTGATTTATTGGATATATTTCGTAAAATTGTAGCAAT TCGTAAGAAAATTTATAAAGCAGCTACCATTGGTTTGTTAATTGGTATTATTGTAGGGGTGAGTATCCCTAAAAGATATA CGGTCACTGTAACTCTTTCTCCGGAAATGGGGAATGATAAAGGAAACAGTGGGTTGACTGGCTTAGCTGCCTCTTTTTTA GGTGGGAGTGCTAGTATGGGAGGGGGTGTTGATGCATTAAATGCTTCCCTGTCATCAGATATTGTATCTTCTACTCCTTT TTTGTTGGAGTTATTGAATATGCAGGTTATGGTAGATAAAGGAGAAACAAAAACACTATCTGGTTATTTAATGACAGAAT CTTCCCCTTGGTGGAGTTATATCATAGGTTTACCCAGTATGTTTATTAGTGGAGTGAAATCTTTATTTACTGATGAAGAA GAACTATTTGGTGAAAGACAACAGGGTGGGGTGGTTATCTTAACTGAGAAAGAGAAAGATCAGATTGATGCGCTAAAAAA GAATATAACGGCTATTATTGATAAGAAAACGGCTATCACCAATGTTAGCGTTACTTTGCAGAATCCTAAAATAGCTGCGG TTATAGCAGACTCTGTCGTTCATCGTTTACAAGAACATATCATAGGCTATCGTACTTCAAAAGCAAAAGAAGATTGTGTT TATCTGGAGAAGTTGTTTGAAGAGAGGAAGCAGGAATATTATGCTACTCAAAAAGATTATGCCGAATATGTGGATACACA TGATAATTTAATTCTTCAGAGTGTACGTGCTGAGCAGGAACGTTTGCAGAATGACATGAGTTTGGCATATCAAGTATATA GTCAGGTAGCCAATCAGCTGCAGGTTGCCAGGGCTAAAGTACAAGAGGAAAAACCTGTGTTTGCAGTGGTGGAACCGGCT GTTGTTCCATTGAAAGCTTCAGGATTAGGTTTGAAAGTTTATGTTTTACTATTTGTATTTTTATTTGTTTTTGGTACTAT AAGCTGGATATTGATGGGGAGGAATATATTTAACTGTTTGAGGAAAAATAAAATTTGA
Upstream 100 bases:
>100_bases AGAAGGCTAATATTGGTAATATTTTGGGTTATGCTACTACGTTTAGTACATTGGGAATGATGGTTGCTTCTATTGCCAAT TTGATAAAAAAATAAGATTT
Downstream 100 bases:
>100_bases GTTTTCTCATGAAGTTATTTTAATATACAATAGAATAAAAATGTCGTCTTCTCTTATAAATAAAGCCACAAAGGGCGTTT TTTGGAGTGCAATTGAACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MSEQSVERKLEDMEIDLLDIFRKIVAIRKKIYKAATIGLLIGIIVGVSIPKRYTVTVTLSPEMGNDKGNSGLTGLAASFL GGSASMGGGVDALNASLSSDIVSSTPFLLELLNMQVMVDKGETKTLSGYLMTESSPWWSYIIGLPSMFISGVKSLFTDEE ELFGERQQGGVVILTEKEKDQIDALKKNITAIIDKKTAITNVSVTLQNPKIAAVIADSVVHRLQEHIIGYRTSKAKEDCV YLEKLFEERKQEYYATQKDYAEYVDTHDNLILQSVRAEQERLQNDMSLAYQVYSQVANQLQVARAKVQEEKPVFAVVEPA VVPLKASGLGLKVYVLLFVFLFVFGTISWILMGRNIFNCLRKNKI
Sequences:
>Translated_365_residues MSEQSVERKLEDMEIDLLDIFRKIVAIRKKIYKAATIGLLIGIIVGVSIPKRYTVTVTLSPEMGNDKGNSGLTGLAASFL GGSASMGGGVDALNASLSSDIVSSTPFLLELLNMQVMVDKGETKTLSGYLMTESSPWWSYIIGLPSMFISGVKSLFTDEE ELFGERQQGGVVILTEKEKDQIDALKKNITAIIDKKTAITNVSVTLQNPKIAAVIADSVVHRLQEHIIGYRTSKAKEDCV YLEKLFEERKQEYYATQKDYAEYVDTHDNLILQSVRAEQERLQNDMSLAYQVYSQVANQLQVARAKVQEEKPVFAVVEPA VVPLKASGLGLKVYVLLFVFLFVFGTISWILMGRNIFNCLRKNKI >Mature_364_residues SEQSVERKLEDMEIDLLDIFRKIVAIRKKIYKAATIGLLIGIIVGVSIPKRYTVTVTLSPEMGNDKGNSGLTGLAASFLG GSASMGGGVDALNASLSSDIVSSTPFLLELLNMQVMVDKGETKTLSGYLMTESSPWWSYIIGLPSMFISGVKSLFTDEEE LFGERQQGGVVILTEKEKDQIDALKKNITAIIDKKTAITNVSVTLQNPKIAAVIADSVVHRLQEHIIGYRTSKAKEDCVY LEKLFEERKQEYYATQKDYAEYVDTHDNLILQSVRAEQERLQNDMSLAYQVYSQVANQLQVARAKVQEEKPVFAVVEPAV VPLKASGLGLKVYVLLFVFLFVFGTISWILMGRNIFNCLRKNKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40581; Mature: 40449
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQSVERKLEDMEIDLLDIFRKIVAIRKKIYKAATIGLLIGIIVGVSIPKRYTVTVTLS CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC PEMGNDKGNSGLTGLAASFLGGSASMGGGVDALNASLSSDIVSSTPFLLELLNMQVMVDK CCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEC GETKTLSGYLMTESSPWWSYIIGLPSMFISGVKSLFTDEEELFGERQQGGVVILTEKEKD CCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECCCHH QIDALKKNITAIIDKKTAITNVSVTLQNPKIAAVIADSVVHRLQEHIIGYRTSKAKEDCV HHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH YLEKLFEERKQEYYATQKDYAEYVDTHDNLILQSVRAEQERLQNDMSLAYQVYSQVANQL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVARAKVQEEKPVFAVVEPAVVPLKASGLGLKVYVLLFVFLFVFGTISWILMGRNIFNCL HHHHHHHHHCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKNKI HHCCC >Mature Secondary Structure SEQSVERKLEDMEIDLLDIFRKIVAIRKKIYKAATIGLLIGIIVGVSIPKRYTVTVTLS CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC PEMGNDKGNSGLTGLAASFLGGSASMGGGVDALNASLSSDIVSSTPFLLELLNMQVMVDK CCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEC GETKTLSGYLMTESSPWWSYIIGLPSMFISGVKSLFTDEEELFGERQQGGVVILTEKEKD CCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECCCHH QIDALKKNITAIIDKKTAITNVSVTLQNPKIAAVIADSVVHRLQEHIIGYRTSKAKEDCV HHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH YLEKLFEERKQEYYATQKDYAEYVDTHDNLILQSVRAEQERLQNDMSLAYQVYSQVANQL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVARAKVQEEKPVFAVVEPAVVPLKASGLGLKVYVLLFVFLFVFGTISWILMGRNIFNCL HHHHHHHHHCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKNKI HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA