| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346905
Identifier: 29346905
GI number: 29346905
Start: 1843983
End: 1844588
Strand: Reverse
Name: 29346905
Synonym: BT_1495
Alternate gene names: NA
Gene position: 1844588-1843983 (Counterclockwise)
Preceding gene: 29346906
Following gene: 29346894
Centisome position: 29.46
GC content: 44.39
Gene sequence:
>606_bases ATGCAGTGGTCTGTCTGGAAGATGGAGGAATCTTTGGATACACTGTTTAGTCTTCTGCCCGATGTCCGAAGAGTTTCTTG TGAGCAGGAAATGCAGCGTTTTACTTCGGACCGAAGGAAACTGGAATGGTTGTCTGTCCGTGTGCTGCTATATTCCATGT TGCAGGAAGATAAAGAGATAGGATATTCATCGGAAGGAAAGCCGCATTTGACAGACAATTCTTCTTTTATCAGTATTTCG CATACAAAGGGGTATGTAGCTGTGATACTTAGTTCCGTAGCTCCTGTAGGCATTGATATTGAGCAATATGGACAGCGTGT GAAAAGAGTATACGATCGTTTTATCCGTTCCGACGAGCGAGTAGAACCTTATCAGGGAGATGAGACTTGGAGTATGCTGT TGCATTGGTCGGCAAAGGAGACAATCTTCAAATCAATGGAAAATGCTGACGCTGATCTTCGGAAACTTTGTTTATCACAT TTCATTCCTCAGAGCGAAGGGGTATTCCAGGTGCGGGAGTATGCAACGGAACGGCAGCAATTGTTCACCGTCGGTTATCG TATTTGTCCGGACTTTGTTTTGACGTGGACTGTCACTATTTCATGA
Upstream 100 bases:
>100_bases GATGAGTAGATAAGACCTGTTCGGGCGGAGAAACTATAATCGGAGAAGAAATTATAAACCAAAAACGATGGGATTATTTC TGCAACATAAAACGGTTGAT
Downstream 100 bases:
>100_bases AGCATCTTTGCATATTGATAAACGGTGAATAATGAGTGGAATGGTCCACCATTATTCACCGCTTATCTTTGGTTACTTAT CTTTCTTGTTCAGTCTGTAA
Product: siderophore (surfactin) biosynthesis regulatory protein
Products: NA
Alternate protein names: 4-Phosphopantetheinyl Transferase; 4-Phosphopantetheinyl Transferase Superfamily Protein; Phosphopantetheinyl Transferase
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MQWSVWKMEESLDTLFSLLPDVRRVSCEQEMQRFTSDRRKLEWLSVRVLLYSMLQEDKEIGYSSEGKPHLTDNSSFISIS HTKGYVAVILSSVAPVGIDIEQYGQRVKRVYDRFIRSDERVEPYQGDETWSMLLHWSAKETIFKSMENADADLRKLCLSH FIPQSEGVFQVREYATERQQLFTVGYRICPDFVLTWTVTIS
Sequences:
>Translated_201_residues MQWSVWKMEESLDTLFSLLPDVRRVSCEQEMQRFTSDRRKLEWLSVRVLLYSMLQEDKEIGYSSEGKPHLTDNSSFISIS HTKGYVAVILSSVAPVGIDIEQYGQRVKRVYDRFIRSDERVEPYQGDETWSMLLHWSAKETIFKSMENADADLRKLCLSH FIPQSEGVFQVREYATERQQLFTVGYRICPDFVLTWTVTIS >Mature_201_residues MQWSVWKMEESLDTLFSLLPDVRRVSCEQEMQRFTSDRRKLEWLSVRVLLYSMLQEDKEIGYSSEGKPHLTDNSSFISIS HTKGYVAVILSSVAPVGIDIEQYGQRVKRVYDRFIRSDERVEPYQGDETWSMLLHWSAKETIFKSMENADADLRKLCLSH FIPQSEGVFQVREYATERQQLFTVGYRICPDFVLTWTVTIS
Specific function: Unknown
COG id: COG2091
COG function: function code H; Phosphopantetheinyl transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23581; Mature: 23581
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQWSVWKMEESLDTLFSLLPDVRRVSCEQEMQRFTSDRRKLEWLSVRVLLYSMLQEDKEI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GYSSEGKPHLTDNSSFISISHTKGYVAVILSSVAPVGIDIEQYGQRVKRVYDRFIRSDER CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC VEPYQGDETWSMLLHWSAKETIFKSMENADADLRKLCLSHFIPQSEGVFQVREYATERQQ CCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LFTVGYRICPDFVLTWTVTIS HHHHHHHHCCCEEEEEEEEEC >Mature Secondary Structure MQWSVWKMEESLDTLFSLLPDVRRVSCEQEMQRFTSDRRKLEWLSVRVLLYSMLQEDKEI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GYSSEGKPHLTDNSSFISISHTKGYVAVILSSVAPVGIDIEQYGQRVKRVYDRFIRSDER CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC VEPYQGDETWSMLLHWSAKETIFKSMENADADLRKLCLSHFIPQSEGVFQVREYATERQQ CCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LFTVGYRICPDFVLTWTVTIS HHHHHHHHCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA