Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346894

Identifier: 29346894

GI number: 29346894

Start: 1828912

End: 1830483

Strand: Reverse

Name: 29346894

Synonym: BT_1484

Alternate gene names: NA

Gene position: 1830483-1828912 (Counterclockwise)

Preceding gene: 29346905

Following gene: 29346891

Centisome position: 29.24

GC content: 46.63

Gene sequence:

>1572_bases
ATGAACGCACCTGTTAAAACGCTCCGTAAGCTCCCGATAGGGATACAAAGTTTCGAATTTCTTCGCTCGGAAGGATATCT
TTATGTCGATAAAACAGAACTGGTCTATCGTCTCGTAACGAAAGGGAAGCCTTATTTCCTCAGTCGTCCCCGGCGTTTCG
GGAAGAGCCTGTTGCTTTCCACGCTTGAAGCTTATTTCAAGGGGAAGAAAGAACTTTTCGAAGGACTCGCTATCGAGAAA
TTGGAGCAGAACTGGTTCGAATACCCGGTGTTGCACCTAAGCTTGAATGCTGAGAAATATGACAGTAGGGAACGATTGGA
AAGAATGCTTGAACTGCAACTGGAAAGTTGGGAAGAGATGTATGGAGTAGATAAAGGCACAATGACCTACTCCGGACGCT
TCATTACCATTATCCGACGTGCATACGAACAGACCGGACGCCGTGTGGTCGTACTCGTAGACGAATATGACAAACCCATG
CTTCAGACATTCGATAAACCTGATTTGCAAGAAGACTTCCGTAAAACGCTGACCGCTTTCTATACTGTACTCAAAGATGC
TGACCCTTATCTTCAGTTTGTCTTTATCACCGGAGTAACGAAGTTTGCGCAGATGGGCATTTTCAGCACGCTTAACCAGT
TGAATGATATCAGCTTTGACCTTGAGTACAACACCCTTTGCGGCATGACACGTGCGGAAATCGAAACCGTTTTTGTGCCT
GAATTGCAAGAACTGGCTCTCCAGACTGAAACCAATTATGGCGAAGCCGTAGAGCAACTCACCCGCCAGTATGACGGTTA
CCGCTTCACTCCTGAGAAAGGATTTACTCCCATGTTCAATCCTTTCAGTGTGCTCAATGCCCTTGCCAAGTCGCGTTTCG
GTGACTATTGGTTTGCCAGCGGAACGCCTACTTTTTTGGTAGAGATCCTAAAGAAGACAAATTTCGACCTTCGCGAATTG
GACGGTATTGAAGTCTCTTCCGCCTCCTTGAGTGACGACAGGGCGAATATCTCCAATCCCGTTCCGATGATTTATCAAAG
CGGATACCTGACTATAAAGTCGTTCGACCAACGCTTTCGTACATATACACTAGGGTTTCCTAACGAAGAGGTGAAATATG
GTTTCCTCAATTTTGTCGCCCCTTTCTATACTCCTGTCGCATCCACCGATACCACCTTTTATATCGGGAAATTTGTGCAT
GAACTGGAAACGGGCGAAACGGAAGCTTTCCTCACTCGTCTGTCCTGTTTCTTCGCCGATTTTCCTTACGAACTGAACGA
GAAAACGGAACGTCATTATCAAGTTGTATTCTATCTCGTCTTCAAACTCATGGGGCAATTCACGCAAGCGGAAGTCCGTA
CCGCTATCGGTCGTGCCGACGCAGTAGTAAAGACTGCGGACTACATCTATGTGTTCGAATTTAAACTCACCGGCACCGCC
GAAGAAGCTCTGAAGCAGATTGATGAAAAAGGTTACCTTTTGCCCTACACTGTGGATGGCAGACGACTGGTGAAAGTCGG
TGTGTCCTTTGATGCCGGGAAACGGAATCTGGGAGATTGGCTGATTGTTTGA

Upstream 100 bases:

>100_bases
TGTGTGAATAGGGCTAAATAATCTCTTCCCTTCGGGTGGAATCTGCATCGAATTTGTTATCTTTGCCCGTAGCATTGGTT
ATTTTTTAATAAAAGCTGAT

Downstream 100 bases:

>100_bases
CTGCACTGTGAATAAAGAAAAACCAAGCTGTTTATTTCTCTTTCGCCAGCGTGAAGACAAATTCCAGTCCGCCGCCTTGA
TTATTCTTGGCAGAAATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MNAPVKTLRKLPIGIQSFEFLRSEGYLYVDKTELVYRLVTKGKPYFLSRPRRFGKSLLLSTLEAYFKGKKELFEGLAIEK
LEQNWFEYPVLHLSLNAEKYDSRERLERMLELQLESWEEMYGVDKGTMTYSGRFITIIRRAYEQTGRRVVVLVDEYDKPM
LQTFDKPDLQEDFRKTLTAFYTVLKDADPYLQFVFITGVTKFAQMGIFSTLNQLNDISFDLEYNTLCGMTRAEIETVFVP
ELQELALQTETNYGEAVEQLTRQYDGYRFTPEKGFTPMFNPFSVLNALAKSRFGDYWFASGTPTFLVEILKKTNFDLREL
DGIEVSSASLSDDRANISNPVPMIYQSGYLTIKSFDQRFRTYTLGFPNEEVKYGFLNFVAPFYTPVASTDTTFYIGKFVH
ELETGETEAFLTRLSCFFADFPYELNEKTERHYQVVFYLVFKLMGQFTQAEVRTAIGRADAVVKTADYIYVFEFKLTGTA
EEALKQIDEKGYLLPYTVDGRRLVKVGVSFDAGKRNLGDWLIV

Sequences:

>Translated_523_residues
MNAPVKTLRKLPIGIQSFEFLRSEGYLYVDKTELVYRLVTKGKPYFLSRPRRFGKSLLLSTLEAYFKGKKELFEGLAIEK
LEQNWFEYPVLHLSLNAEKYDSRERLERMLELQLESWEEMYGVDKGTMTYSGRFITIIRRAYEQTGRRVVVLVDEYDKPM
LQTFDKPDLQEDFRKTLTAFYTVLKDADPYLQFVFITGVTKFAQMGIFSTLNQLNDISFDLEYNTLCGMTRAEIETVFVP
ELQELALQTETNYGEAVEQLTRQYDGYRFTPEKGFTPMFNPFSVLNALAKSRFGDYWFASGTPTFLVEILKKTNFDLREL
DGIEVSSASLSDDRANISNPVPMIYQSGYLTIKSFDQRFRTYTLGFPNEEVKYGFLNFVAPFYTPVASTDTTFYIGKFVH
ELETGETEAFLTRLSCFFADFPYELNEKTERHYQVVFYLVFKLMGQFTQAEVRTAIGRADAVVKTADYIYVFEFKLTGTA
EEALKQIDEKGYLLPYTVDGRRLVKVGVSFDAGKRNLGDWLIV
>Mature_523_residues
MNAPVKTLRKLPIGIQSFEFLRSEGYLYVDKTELVYRLVTKGKPYFLSRPRRFGKSLLLSTLEAYFKGKKELFEGLAIEK
LEQNWFEYPVLHLSLNAEKYDSRERLERMLELQLESWEEMYGVDKGTMTYSGRFITIIRRAYEQTGRRVVVLVDEYDKPM
LQTFDKPDLQEDFRKTLTAFYTVLKDADPYLQFVFITGVTKFAQMGIFSTLNQLNDISFDLEYNTLCGMTRAEIETVFVP
ELQELALQTETNYGEAVEQLTRQYDGYRFTPEKGFTPMFNPFSVLNALAKSRFGDYWFASGTPTFLVEILKKTNFDLREL
DGIEVSSASLSDDRANISNPVPMIYQSGYLTIKSFDQRFRTYTLGFPNEEVKYGFLNFVAPFYTPVASTDTTFYIGKFVH
ELETGETEAFLTRLSCFFADFPYELNEKTERHYQVVFYLVFKLMGQFTQAEVRTAIGRADAVVKTADYIYVFEFKLTGTA
EEALKQIDEKGYLLPYTVDGRRLVKVGVSFDAGKRNLGDWLIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018631
- InterPro:   IPR012547 [H]

Pfam domain/function: PF09820 AAA-ATPase_like; PF08011 DUF1703 [H]

EC number: NA

Molecular weight: Translated: 60636; Mature: 60636

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPVKTLRKLPIGIQSFEFLRSEGYLYVDKTELVYRLVTKGKPYFLSRPRRFGKSLLLS
CCCCHHHHHHCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
TLEAYFKGKKELFEGLAIEKLEQNWFEYPVLHLSLNAEKYDSRERLERMLELQLESWEEM
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHCCCHHHHHHHHHHHHHHHHHH
YGVDKGTMTYSGRFITIIRRAYEQTGRRVVVLVDEYDKPMLQTFDKPDLQEDFRKTLTAF
HCCCCCCEEECCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHH
YTVLKDADPYLQFVFITGVTKFAQMGIFSTLNQLNDISFDLEYNTLCGMTRAEIETVFVP
HHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHCCCHHHHHHEEECC
ELQELALQTETNYGEAVEQLTRQYDGYRFTPEKGFTPMFNPFSVLNALAKSRFGDYWFAS
CHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEECC
GTPTFLVEILKKTNFDLRELDGIEVSSASLSDDRANISNPVPMIYQSGYLTIKSFDQRFR
CCHHHHHHHHHHCCCCHHHCCCCEECCCCCCCCCCCCCCCCCEEEECCEEEEHHHHHHHH
TYTLGFPNEEVKYGFLNFVAPFYTPVASTDTTFYIGKFVHELETGETEAFLTRLSCFFAD
EEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
FPYELNEKTERHYQVVFYLVFKLMGQFTQAEVRTAIGRADAVVKTADYIYVFEFKLTGTA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEEEEECCCH
EEALKQIDEKGYLLPYTVDGRRLVKVGVSFDAGKRNLGDWLIV
HHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCCCEEEC
>Mature Secondary Structure
MNAPVKTLRKLPIGIQSFEFLRSEGYLYVDKTELVYRLVTKGKPYFLSRPRRFGKSLLLS
CCCCHHHHHHCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
TLEAYFKGKKELFEGLAIEKLEQNWFEYPVLHLSLNAEKYDSRERLERMLELQLESWEEM
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHCCCHHHHHHHHHHHHHHHHHH
YGVDKGTMTYSGRFITIIRRAYEQTGRRVVVLVDEYDKPMLQTFDKPDLQEDFRKTLTAF
HCCCCCCEEECCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHH
YTVLKDADPYLQFVFITGVTKFAQMGIFSTLNQLNDISFDLEYNTLCGMTRAEIETVFVP
HHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHCCCHHHHHHEEECC
ELQELALQTETNYGEAVEQLTRQYDGYRFTPEKGFTPMFNPFSVLNALAKSRFGDYWFAS
CHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEECC
GTPTFLVEILKKTNFDLRELDGIEVSSASLSDDRANISNPVPMIYQSGYLTIKSFDQRFR
CCHHHHHHHHHHCCCCHHHCCCCEECCCCCCCCCCCCCCCCCEEEECCEEEEHHHHHHHH
TYTLGFPNEEVKYGFLNFVAPFYTPVASTDTTFYIGKFVHELETGETEAFLTRLSCFFAD
EEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
FPYELNEKTERHYQVVFYLVFKLMGQFTQAEVRTAIGRADAVVKTADYIYVFEFKLTGTA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEEEEECCCH
EEALKQIDEKGYLLPYTVDGRRLVKVGVSFDAGKRNLGDWLIV
HHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2388847 [H]