Click here to switch to the map view.

The map label for this gene is nrfH [H]

Identifier: 29346828

GI number: 29346828

Start: 1751850

End: 1752446

Strand: Reverse

Name: nrfH [H]

Synonym: BT_1418

Alternate gene names: 29346828

Gene position: 1752446-1751850 (Counterclockwise)

Preceding gene: 29346829

Following gene: 29346827

Centisome position: 27.99

GC content: 44.22

Gene sequence:

>597_bases
ATGATGAAGTTACCATTTATAAACCGAATTTTTCCTTCGTACAGATCGAAGATAATAGCCATTATCATTGGCGGTATTAT
TGTAGGCGGAGGAGCTTTATTTATGTACATGCTTCGGGCACATACGTATCTGGGCGATGATCCGGCAGCGTGTGTGAATT
GTCACATCATGTCTCCTTATTATGCCACATGGTTTCACAGTTCACATGCACGGGATGCCACCTGTAACGATTGTCATGTT
CCTCACGAGAACATTGTAAAGAAATGGACATTCAAAGGAATGGATGGTATGAAGCACGTCGCAGCTTTCCTTACCAAAAG
TGAGCCACAAGTGATACAGGCCCACGAGGCCAGTTCGCAGGTGATTATGAACAATTGTATTCGTTGCCATACACAACTGA
ATACGGAGTTTGTAAAAACAGGAAAGATAGATTATATGATGTCTATGGTAGGAGAAGGAAAGGCTTGCTGGGACTGTCAT
CGGGATGTACCTCATGGTGGTAAGAATTCGTTGTCCGCTACTCCGGCAGCTATCGTCCCTCTTCCCGAATCGCCTGTACC
GGAATGGCTCCGGAAGATGGTTAATAATAAGGAATAA

Upstream 100 bases:

>100_bases
TTATTAATCAGTGTTCGTATAATTTTCTTTAAAAGGTGTAATAGTTATTACACCTTTTGTGTTTCCAAAGCTTTACTTTT
GTGAAAAATACTTTTTCACT

Downstream 100 bases:

>100_bases
GCATATACATAACTACGTAATAAAATAATAAAACCGATATACAATGGAAAAGAAATTAAAATCATGGCAAGGATGGCTGT
TGTCCGGAGGTTCAATGGTC

Product: quinol oxidase

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MMKLPFINRIFPSYRSKIIAIIIGGIIVGGGALFMYMLRAHTYLGDDPAACVNCHIMSPYYATWFHSSHARDATCNDCHV
PHENIVKKWTFKGMDGMKHVAAFLTKSEPQVIQAHEASSQVIMNNCIRCHTQLNTEFVKTGKIDYMMSMVGEGKACWDCH
RDVPHGGKNSLSATPAAIVPLPESPVPEWLRKMVNNKE

Sequences:

>Translated_198_residues
MMKLPFINRIFPSYRSKIIAIIIGGIIVGGGALFMYMLRAHTYLGDDPAACVNCHIMSPYYATWFHSSHARDATCNDCHV
PHENIVKKWTFKGMDGMKHVAAFLTKSEPQVIQAHEASSQVIMNNCIRCHTQLNTEFVKTGKIDYMMSMVGEGKACWDCH
RDVPHGGKNSLSATPAAIVPLPESPVPEWLRKMVNNKE
>Mature_198_residues
MMKLPFINRIFPSYRSKIIAIIIGGIIVGGGALFMYMLRAHTYLGDDPAACVNCHIMSPYYATWFHSSHARDATCNDCHV
PHENIVKKWTFKGMDGMKHVAAFLTKSEPQVIQAHEASSQVIMNNCIRCHTQLNTEFVKTGKIDYMMSMVGEGKACWDCH
RDVPHGGKNSLSATPAAIVPLPESPVPEWLRKMVNNKE

Specific function: Subunit of the nitrite reductase complex that mediates electron transfer from quinol to the catalytic subunit [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017571
- InterPro:   IPR011031
- InterPro:   IPR005126 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 22164; Mature: 22164

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
10.1 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
10.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKLPFINRIFPSYRSKIIAIIIGGIIVGGGALFMYMLRAHTYLGDDPAACVNCHIMSPY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCH
YATWFHSSHARDATCNDCHVPHENIVKKWTFKGMDGMKHVAAFLTKSEPQVIQAHEASSQ
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEHHCCHHH
VIMNNCIRCHTQLNTEFVKTGKIDYMMSMVGEGKACWDCHRDVPHGGKNSLSATPAAIVP
HHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCEEEEE
LPESPVPEWLRKMVNNKE
CCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MMKLPFINRIFPSYRSKIIAIIIGGIIVGGGALFMYMLRAHTYLGDDPAACVNCHIMSPY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCH
YATWFHSSHARDATCNDCHVPHENIVKKWTFKGMDGMKHVAAFLTKSEPQVIQAHEASSQ
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEHHCCHHH
VIMNNCIRCHTQLNTEFVKTGKIDYMMSMVGEGKACWDCHRDVPHGGKNSLSATPAAIVP
HHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCEEEEE
LPESPVPEWLRKMVNNKE
CCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10672190; 14500908 [H]