| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346829
Identifier: 29346829
GI number: 29346829
Start: 1752603
End: 1753097
Strand: Reverse
Name: 29346829
Synonym: BT_1419
Alternate gene names: NA
Gene position: 1753097-1752603 (Counterclockwise)
Preceding gene: 29346830
Following gene: 29346828
Centisome position: 28.0
GC content: 44.85
Gene sequence:
>495_bases ATGAAAACAAAACTTTACCTCCCGATCATCAGCCTTCTGGCAATGTCTGTATTTGCATTTATTTCTTGTGACGATTCGGA TAGCGATACCACCAAACCGGTGATTGAACTAAGTGAACCGGAAGAAGGGCAAGAACTGAAAATTGGCGACGAGCACGGAG TACATTTTGAAATGGATCTGTCGGACGACGTCATGTTAAAGTCATATATGATTGAAATACATAGTAATTTCGACCACCAT TCGCATGGAAAGAGCAGGGCTGCTGCTACGGGCGAAGCCACTGTCGATTTCAGTTTCAACAGGTCTTATGATATCTCCGG AAAGAAAACGGCGCATATCCATCACCACGATATTGTAATTCCGGCCAATGCTACTCCGGGCGATTATCATCTGATGGTTT ATTGCACGGATGCCGCAGGAAACGAAACCTACATTGCGCGCAATATTGTACTGAGCACTACCGCCGAAAGGGACGATCAT CATCACGATGAATAA
Upstream 100 bases:
>100_bases GATATTACAATCATCTTAGTTTTTACAGGAAAGTAGAAATTCCGGAACCGGGACGAAACTTCCAATTATTAATCAAAATT CCATTTAAAAAATTACTGTA
Downstream 100 bases:
>100_bases ATAAAATAGCCAGCCTGCCATGCAAAACGGGGGCGGGATGGAGTATCTTTTTTCTCTTATTAATCAGTGTTCGTATAATT TTCTTTAAAAGGTGTAATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKTKLYLPIISLLAMSVFAFISCDDSDSDTTKPVIELSEPEEGQELKIGDEHGVHFEMDLSDDVMLKSYMIEIHSNFDHH SHGKSRAAATGEATVDFSFNRSYDISGKKTAHIHHHDIVIPANATPGDYHLMVYCTDAAGNETYIARNIVLSTTAERDDH HHDE
Sequences:
>Translated_164_residues MKTKLYLPIISLLAMSVFAFISCDDSDSDTTKPVIELSEPEEGQELKIGDEHGVHFEMDLSDDVMLKSYMIEIHSNFDHH SHGKSRAAATGEATVDFSFNRSYDISGKKTAHIHHHDIVIPANATPGDYHLMVYCTDAAGNETYIARNIVLSTTAERDDH HHDE >Mature_164_residues MKTKLYLPIISLLAMSVFAFISCDDSDSDTTKPVIELSEPEEGQELKIGDEHGVHFEMDLSDDVMLKSYMIEIHSNFDHH SHGKSRAAATGEATVDFSFNRSYDISGKKTAHIHHHDIVIPANATPGDYHLMVYCTDAAGNETYIARNIVLSTTAERDDH HHDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18328; Mature: 18328
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKLYLPIISLLAMSVFAFISCDDSDSDTTKPVIELSEPEEGQELKIGDEHGVHFEMDL CCEEEHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEECCCCCCCEEEECCCCCEEEEECC SDDVMLKSYMIEIHSNFDHHSHGKSRAAATGEATVDFSFNRSYDISGKKTAHIHHHDIVI CCCHHEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCEEEEEEECEEEE PANATPGDYHLMVYCTDAAGNETYIARNIVLSTTAERDDHHHDE ECCCCCCCEEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCC >Mature Secondary Structure MKTKLYLPIISLLAMSVFAFISCDDSDSDTTKPVIELSEPEEGQELKIGDEHGVHFEMDL CCEEEHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEECCCCCCCEEEECCCCCEEEEECC SDDVMLKSYMIEIHSNFDHHSHGKSRAAATGEATVDFSFNRSYDISGKKTAHIHHHDIVI CCCHHEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCEEEEEEECEEEE PANATPGDYHLMVYCTDAAGNETYIARNIVLSTTAERDDHHHDE ECCCCCCCEEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA