| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345908
Identifier: 29345908
GI number: 29345908
Start: 616088
End: 616972
Strand: Reverse
Name: 29345908
Synonym: BT_0498
Alternate gene names: NA
Gene position: 616972-616088 (Counterclockwise)
Preceding gene: 29345920
Following gene: 29345907
Centisome position: 9.86
GC content: 42.49
Gene sequence:
>885_bases ATGAAAATATTAAACTTATGGATGGTTGCTCTAATGGCACTATCATTCTCATTCACTTTTGTATCTTGCAGTGACGATAA CGACGATACCGACAATACAGAGCAAGCAAAAGCCATTGCCGGCACTTACAAAGGTTATTCTATTGGCGAAAGCAGAATGT TCTCTGATTATCTGATGGGCGACGATGCCAGCGCAACAATTACCGCCAATACAGATGGTACCGTCAATCTGGTTTATAAA TCAGGATCCGGAGATTTTATCCTGAATAACCTGACAGTTTCTTCCAAATCATTTAAAGGCGAAGGTGAAGTTGCCCTAGC TATGGAAGGAAGTGAACCTGCCAACTACGAATATACACTGGAAGGTAGTGTCAGCGATGCTAAAGTACTAACCCTGAAAG CCAATGTTCCTGTGCCAATGGGTGGCATCGATATCAATTTCATTCAGGCAGAAACTCCGATTGCTTATTACGTAGCCGCT ACTTATAAGTATAATACTAATCTTGCTATCAGCGTTATGGGAAGTTCATATGGTTCTACCGAAGATTGTAAAGCAGTCAT TAAACGTGCATCCGAAACGACAGTAGATATCACCCTAAACGGTTTTGGCAATTTGACCGGAGGCGGTAATATGAATTTGG GAGACTTCACGATTAGCGGAGTAAACGTTGAAAAAGCAGATGACGGCTACACACTCAGTTTAGGCGCATTTGAATCTGCA GCCGAATCCGCAAGCGGTACTACTCCAATTACAGGTGAAAGTCTGGAAGGTACAGTTACAGCAAATGGTAAAGCTAATAT TACGGTAGCCTTCAAACCAGGAGCCATGCCTATGGCAATCACCGCAGTATTCACCGGAAACGTCAAAAAAACTAGTGCAC AATAA
Upstream 100 bases:
>100_bases GCCCATTTTTTTTCATTTCTTTTAGGTATTGTCCCTGCTTATATATCCCCCTAACTTTGCAAACGAAAAATAAATTAATC ATTATCTATCAAAATTAAGT
Downstream 100 bases:
>100_bases ATAACTAATAGAAAAAATGAGAAGAAGCAGTAACGCTATTTTCAAAAATATAATGATACTGGGAGCGGCTATGTCGCTCT CAGCTTGTAATGGAATGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MKILNLWMVALMALSFSFTFVSCSDDNDDTDNTEQAKAIAGTYKGYSIGESRMFSDYLMGDDASATITANTDGTVNLVYK SGSGDFILNNLTVSSKSFKGEGEVALAMEGSEPANYEYTLEGSVSDAKVLTLKANVPVPMGGIDINFIQAETPIAYYVAA TYKYNTNLAISVMGSSYGSTEDCKAVIKRASETTVDITLNGFGNLTGGGNMNLGDFTISGVNVEKADDGYTLSLGAFESA AESASGTTPITGESLEGTVTANGKANITVAFKPGAMPMAITAVFTGNVKKTSAQ
Sequences:
>Translated_294_residues MKILNLWMVALMALSFSFTFVSCSDDNDDTDNTEQAKAIAGTYKGYSIGESRMFSDYLMGDDASATITANTDGTVNLVYK SGSGDFILNNLTVSSKSFKGEGEVALAMEGSEPANYEYTLEGSVSDAKVLTLKANVPVPMGGIDINFIQAETPIAYYVAA TYKYNTNLAISVMGSSYGSTEDCKAVIKRASETTVDITLNGFGNLTGGGNMNLGDFTISGVNVEKADDGYTLSLGAFESA AESASGTTPITGESLEGTVTANGKANITVAFKPGAMPMAITAVFTGNVKKTSAQ >Mature_294_residues MKILNLWMVALMALSFSFTFVSCSDDNDDTDNTEQAKAIAGTYKGYSIGESRMFSDYLMGDDASATITANTDGTVNLVYK SGSGDFILNNLTVSSKSFKGEGEVALAMEGSEPANYEYTLEGSVSDAKVLTLKANVPVPMGGIDINFIQAETPIAYYVAA TYKYNTNLAISVMGSSYGSTEDCKAVIKRASETTVDITLNGFGNLTGGGNMNLGDFTISGVNVEKADDGYTLSLGAFESA AESASGTTPITGESLEGTVTANGKANITVAFKPGAMPMAITAVFTGNVKKTSAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30711; Mature: 30711
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILNLWMVALMALSFSFTFVSCSDDNDDTDNTEQAKAIAGTYKGYSIGESRMFSDYLMG CCHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCHHHHHEEECCCCCCCCCCHHHHHHHCC DDASATITANTDGTVNLVYKSGSGDFILNNLTVSSKSFKGEGEVALAMEGSEPANYEYTL CCCCEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEE EGSVSDAKVLTLKANVPVPMGGIDINFIQAETPIAYYVAATYKYNTNLAISVMGSSYGST ECCCCCEEEEEEECCCCCCCCCEEEEEEEECCCEEEEEEEEEEECCCEEEEEECCCCCCH EDCKAVIKRASETTVDITLNGFGNLTGGGNMNLGDFTISGVNVEKADDGYTLSLGAFESA HHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECEEEEECCCCEEEEECCCHHH AESASGTTPITGESLEGTVTANGKANITVAFKPGAMPMAITAVFTGNVKKTSAQ HHHCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCEEEEEEEECCEEECCCC >Mature Secondary Structure MKILNLWMVALMALSFSFTFVSCSDDNDDTDNTEQAKAIAGTYKGYSIGESRMFSDYLMG CCHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCHHHHHEEECCCCCCCCCCHHHHHHHCC DDASATITANTDGTVNLVYKSGSGDFILNNLTVSSKSFKGEGEVALAMEGSEPANYEYTL CCCCEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEE EGSVSDAKVLTLKANVPVPMGGIDINFIQAETPIAYYVAATYKYNTNLAISVMGSSYGST ECCCCCEEEEEEECCCCCCCCCEEEEEEEECCCEEEEEEEEEEECCCEEEEEECCCCCCH EDCKAVIKRASETTVDITLNGFGNLTGGGNMNLGDFTISGVNVEKADDGYTLSLGAFESA HHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECEEEEECCCCEEEEECCCHHH AESASGTTPITGESLEGTVTANGKANITVAFKPGAMPMAITAVFTGNVKKTSAQ HHHCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCEEEEEEEECCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA