Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345907

Identifier: 29345907

GI number: 29345907

Start: 615409

End: 616071

Strand: Reverse

Name: 29345907

Synonym: BT_0497

Alternate gene names: NA

Gene position: 616071-615409 (Counterclockwise)

Preceding gene: 29345908

Following gene: 29345906

Centisome position: 9.84

GC content: 39.97

Gene sequence:

>663_bases
ATGAGAAGAAGCAGTAACGCTATTTTCAAAAATATAATGATACTGGGAGCGGCTATGTCGCTCTCAGCTTGTAATGGAAT
GTTTGAAGGGATTTATGACGATCCCATTGAAGCGGAAATGGAGATTAAAGAAAGTAGCTTTTCACAAATCAATGCTACCG
AGTACACTAACTGGGTCTATATCGACCTATCCGAACGTAAAGCAACGACTGTTGAAATCGGAGAGGAACATAAGAGCGAG
ATACCAGCAAAATGGGACCTTGCCATCCACCGCTACGACATCAAAACCAATGAAGGTGCAGCCTTTCAGACAACTTATAC
AAGTATTGATGACCTGAAGGCCAGTGGAAAACTTCCCGCCGAAGAAAATTTTGTAAAAGACGAATGGACGACAGATAAAA
TAGCAATCGATATGTCCGGTATGATGGAAGGAAACATTAAATATACAGAAGACTATCGTAATGATATTTTATCCGGCTGG
TTAAACGTAGACACTTCAAGTATGCCTCCTATTTACACCATGTCCAATCAAGTCTATCTGATACAGTTGAAGGATAATAC
CTATGCGGCCATTCGTTTTACCAACTATACCAATGCCAGAGGCATAAAAGGCTATATCGACTTCGATTTCCTATATCCAC
TTGATTTCGAAGAAAACAACTAA

Upstream 100 bases:

>100_bases
ACGGTAGCCTTCAAACCAGGAGCCATGCCTATGGCAATCACCGCAGTATTCACCGGAAACGTCAAAAAAACTAGTGCACA
ATAAATAACTAATAGAAAAA

Downstream 100 bases:

>100_bases
GAAACCAATTACAAAGAATGAAACCTACATTTATAGCATCAATCTTGATATTCTCCTTTATAGTAACCTGTTCCACATTC
GCACAACAATCAACCGAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRRSSNAIFKNIMILGAAMSLSACNGMFEGIYDDPIEAEMEIKESSFSQINATEYTNWVYIDLSERKATTVEIGEEHKSE
IPAKWDLAIHRYDIKTNEGAAFQTTYTSIDDLKASGKLPAEENFVKDEWTTDKIAIDMSGMMEGNIKYTEDYRNDILSGW
LNVDTSSMPPIYTMSNQVYLIQLKDNTYAAIRFTNYTNARGIKGYIDFDFLYPLDFEENN

Sequences:

>Translated_220_residues
MRRSSNAIFKNIMILGAAMSLSACNGMFEGIYDDPIEAEMEIKESSFSQINATEYTNWVYIDLSERKATTVEIGEEHKSE
IPAKWDLAIHRYDIKTNEGAAFQTTYTSIDDLKASGKLPAEENFVKDEWTTDKIAIDMSGMMEGNIKYTEDYRNDILSGW
LNVDTSSMPPIYTMSNQVYLIQLKDNTYAAIRFTNYTNARGIKGYIDFDFLYPLDFEENN
>Mature_220_residues
MRRSSNAIFKNIMILGAAMSLSACNGMFEGIYDDPIEAEMEIKESSFSQINATEYTNWVYIDLSERKATTVEIGEEHKSE
IPAKWDLAIHRYDIKTNEGAAFQTTYTSIDDLKASGKLPAEENFVKDEWTTDKIAIDMSGMMEGNIKYTEDYRNDILSGW
LNVDTSSMPPIYTMSNQVYLIQLKDNTYAAIRFTNYTNARGIKGYIDFDFLYPLDFEENN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25178; Mature: 25178

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSSNAIFKNIMILGAAMSLSACNGMFEGIYDDPIEAEMEIKESSFSQINATEYTNWVY
CCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEE
IDLSERKATTVEIGEEHKSEIPAKWDLAIHRYDIKTNEGAAFQTTYTSIDDLKASGKLPA
EEECCCCEEEEEECCHHHHCCCEEEEEEEEEEEEECCCCCEEEEEECCHHHHHCCCCCCC
EENFVKDEWTTDKIAIDMSGMMEGNIKYTEDYRNDILSGWLNVDTSSMPPIYTMSNQVYL
CCCCCCCCCCCCEEEEEECCCEECCEEECHHHHHHHHHHEECCCCCCCCCEEEECCEEEE
IQLKDNTYAAIRFTNYTNARGIKGYIDFDFLYPLDFEENN
EEECCCCEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCC
>Mature Secondary Structure
MRRSSNAIFKNIMILGAAMSLSACNGMFEGIYDDPIEAEMEIKESSFSQINATEYTNWVY
CCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEE
IDLSERKATTVEIGEEHKSEIPAKWDLAIHRYDIKTNEGAAFQTTYTSIDDLKASGKLPA
EEECCCCEEEEEECCHHHHCCCEEEEEEEEEEEEECCCCCEEEEEECCHHHHHCCCCCCC
EENFVKDEWTTDKIAIDMSGMMEGNIKYTEDYRNDILSGWLNVDTSSMPPIYTMSNQVYL
CCCCCCCCCCCCEEEEEECCCEECCEEECHHHHHHHHHHEECCCCCCCCCEEEECCEEEE
IQLKDNTYAAIRFTNYTNARGIKGYIDFDFLYPLDFEENN
EEECCCCEEEEEEECCCCCCCEEEEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA