| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is cmo [H]
Identifier: 29345920
GI number: 29345920
Start: 633782
End: 634882
Strand: Reverse
Name: cmo [H]
Synonym: BT_0510
Alternate gene names: 29345920
Gene position: 634882-633782 (Counterclockwise)
Preceding gene: 29345921
Following gene: 29345908
Centisome position: 10.14
GC content: 48.32
Gene sequence:
>1101_bases ATGAAACGTATCATCCCCCTTACTCCCCGCCGATGGCTGGCTTTAGAAATATTTCGCCGGATGAAACACGAAAGAGTGGA AGAACATCCGCTCAGACAGCTTTTTTGGGAATGCACCTTACGATGTAATGTACGTTGCCGCCATTGTGGCAGTGACTGCA AGTCCTCTCCCGCTACTCCGGATATGCCTCTGCAGGATTTTCTAAAAGTACTGGACAGCATAGCAACACATACCAATCCG CACGATGTATTCGTCATTATCTCCGGTGGAGAGCCAACCGTACGTGAAGATTTGGAAACTTGCGGCAAAGAAATATCCCG ACGGGGATACCCGTGGGGCATGGTATGCAACGGCCTGTGTCTCACACGCGAACGGCTTCACAACCTGATCCGCAGCGGTA TGCGTAGTATATCCATCAGCCTTGACGGACTGAAGGATGTACACAACTGGATGCGACGACATCCCGAAAGTTTCGATTGT GCCGTAAATGCCATACGGGAAATCACAGCTATCCCTGAACTGACATTCGACGTCATTACCTGTGTCACCCGCCGTAGCCT GCCACAGTTGCCGGCTATGAAAGAGTTACTTATCAGTCTCGGAGTCAAACGATGGAGAGTATCTACCATCTTTCCGGTAG GACGAGCCGCCGAAGAACCGGAATTCCGTATGAACGGAGAAGAACTGAAACAAGTACTCGACTTCATCCGTGACACCCGA AAGGAAGGAATTATCCGTGCGAGTTACGGCTGCGAAGGTTTCCTGGGTAACTATGAAGGTGAAGTACGGAATACTCCTTT CTTCTGTAGTGCCGGAATATCAGTCGGCTCCGTTTTGATTGACGGTTCTATCAGTGCCTGTAGCAGCATCCGCTCCAACT ACCATCAAGGAAATATCTATCAGGATGATTTTTGGGAAATATGGCAAACGAAATTCCAGCCTTATCGCGACCGTTCATGG ATGAAAAAAGACGAGTGCGCCCGATGCAAATACTTCCGTTATTGTCAAGGCAATGGTATGCATTTGAGAGATAATGAAGG AAAACTACTGGTATGTCATCTGAACAGGTTGACAGGAAACTCTGCAAATGTTCCGGAATAA
Upstream 100 bases:
>100_bases GCGAAAAGAATGGTGCATACCAAACAAAAAAGATTAGAATACAAGACCTTGGAAAAGAGGGAAAAGTCACTTTACTTAAA GAGGAGAAAAAAGAAGAAGA
Downstream 100 bases:
>100_bases AAGATTCAGACCCACTATATATTGCTAGTAACCCGCCCAAGAATACCCATTTCAGGTGATTGCAGGAAATCGTCAAAGCC CCTATCTTTGCAATATCAGA
Product: putative heme biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MKRIIPLTPRRWLALEIFRRMKHERVEEHPLRQLFWECTLRCNVRCRHCGSDCKSSPATPDMPLQDFLKVLDSIATHTNP HDVFVIISGGEPTVREDLETCGKEISRRGYPWGMVCNGLCLTRERLHNLIRSGMRSISISLDGLKDVHNWMRRHPESFDC AVNAIREITAIPELTFDVITCVTRRSLPQLPAMKELLISLGVKRWRVSTIFPVGRAAEEPEFRMNGEELKQVLDFIRDTR KEGIIRASYGCEGFLGNYEGEVRNTPFFCSAGISVGSVLIDGSISACSSIRSNYHQGNIYQDDFWEIWQTKFQPYRDRSW MKKDECARCKYFRYCQGNGMHLRDNEGKLLVCHLNRLTGNSANVPE
Sequences:
>Translated_366_residues MKRIIPLTPRRWLALEIFRRMKHERVEEHPLRQLFWECTLRCNVRCRHCGSDCKSSPATPDMPLQDFLKVLDSIATHTNP HDVFVIISGGEPTVREDLETCGKEISRRGYPWGMVCNGLCLTRERLHNLIRSGMRSISISLDGLKDVHNWMRRHPESFDC AVNAIREITAIPELTFDVITCVTRRSLPQLPAMKELLISLGVKRWRVSTIFPVGRAAEEPEFRMNGEELKQVLDFIRDTR KEGIIRASYGCEGFLGNYEGEVRNTPFFCSAGISVGSVLIDGSISACSSIRSNYHQGNIYQDDFWEIWQTKFQPYRDRSW MKKDECARCKYFRYCQGNGMHLRDNEGKLLVCHLNRLTGNSANVPE >Mature_366_residues MKRIIPLTPRRWLALEIFRRMKHERVEEHPLRQLFWECTLRCNVRCRHCGSDCKSSPATPDMPLQDFLKVLDSIATHTNP HDVFVIISGGEPTVREDLETCGKEISRRGYPWGMVCNGLCLTRERLHNLIRSGMRSISISLDGLKDVHNWMRRHPESFDC AVNAIREITAIPELTFDVITCVTRRSLPQLPAMKELLISLGVKRWRVSTIFPVGRAAEEPEFRMNGEELKQVLDFIRDTR KEGIIRASYGCEGFLGNYEGEVRNTPFFCSAGISVGSVLIDGSISACSSIRSNYHQGNIYQDDFWEIWQTKFQPYRDRSW MKKDECARCKYFRYCQGNGMHLRDNEGKLLVCHLNRLTGNSANVPE
Specific function: Involved in the biosynthesis of a molybdopterin-based tungsten cofactor [H]
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moaA/nifB/pqqE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006638 - InterPro: IPR000385 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 42218; Mature: 42218
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIIPLTPRRWLALEIFRRMKHERVEEHPLRQLFWECTLRCNVRCRHCGSDCKSSPATP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC DMPLQDFLKVLDSIATHTNPHDVFVIISGGEPTVREDLETCGKEISRRGYPWGMVCNGLC CCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHCCHH LTRERLHNLIRSGMRSISISLDGLKDVHNWMRRHPESFDCAVNAIREITAIPELTFDVIT HHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHH CVTRRSLPQLPAMKELLISLGVKRWRVSTIFPVGRAAEEPEFRMNGEELKQVLDFIRDTR HHHHHCCCCCHHHHHHHHHHCHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH KEGIIRASYGCEGFLGNYEGEVRNTPFFCSAGISVGSVLIDGSISACSSIRSNYHQGNIY HCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCHHHHHHHHHCCCCCCCC QDDFWEIWQTKFQPYRDRSWMKKDECARCKYFRYCQGNGMHLRDNEGKLLVCHLNRLTGN CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEECCCCCEEECCCCCEEEEEECCCCCC SANVPE CCCCCC >Mature Secondary Structure MKRIIPLTPRRWLALEIFRRMKHERVEEHPLRQLFWECTLRCNVRCRHCGSDCKSSPATP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC DMPLQDFLKVLDSIATHTNPHDVFVIISGGEPTVREDLETCGKEISRRGYPWGMVCNGLC CCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHCCHH LTRERLHNLIRSGMRSISISLDGLKDVHNWMRRHPESFDCAVNAIREITAIPELTFDVIT HHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHH CVTRRSLPQLPAMKELLISLGVKRWRVSTIFPVGRAAEEPEFRMNGEELKQVLDFIRDTR HHHHHCCCCCHHHHHHHHHHCHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH KEGIIRASYGCEGFLGNYEGEVRNTPFFCSAGISVGSVLIDGSISACSSIRSNYHQGNIY HCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCHHHHHHHHHCCCCCCCC QDDFWEIWQTKFQPYRDRSWMKKDECARCKYFRYCQGNGMHLRDNEGKLLVCHLNRLTGN CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEECCCCCEEECCCCCEEEEEECCCCCC SANVPE CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7642512 [H]