| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345759
Identifier: 29345759
GI number: 29345759
Start: 419336
End: 421744
Strand: Reverse
Name: 29345759
Synonym: BT_0349
Alternate gene names: NA
Gene position: 421744-419336 (Counterclockwise)
Preceding gene: 29345760
Following gene: 29345758
Centisome position: 6.74
GC content: 46.49
Gene sequence:
>2409_bases ATGAAAACCACCTCGTTCATACTTGCCCTTATTATATCCATCTCCATCGGAAAAGCCCAGACGAACCATCAGGTCTCTTA CTTTTCCCTTCAAGATGTGAAGTTATTAAGCAGTCCTTTTCTGCAAGCTCAACAGACTGATTTACATTATATCTTAGCTC TCGACCCGGACAGATTATCAGCTCCTTTCCTTCGCGAAGCCGGACTGACACCCAAAGCCCCAAGCTATACCAACTGGGAG AATACAGGACTGGACGGTCACATCGGCGGACATTACCTTTCCGCACTTTCCATGATGTATGCCGCCACCGGAGATACGGC GATATACCACCGTCTCAACTATATGCTCAACGAACTACACCGTGCACAGCAAGCTGTCGGCACAGGATTTATCGGAGGAA CACCCGGTAGCCTCCAACTTTGGAAAGAAATCAAAGCAGGTGACATTCGTGCCGGAGGCTTCAGCTTAAACGGCAAATGG GTACCCCTCTATAATATACACAAAACGTATGCCGGACTGCGGGACGCTTACCTGTATGCTCACAGCGATCTGGCACGTCA GATGCTGATTGATCTTACCGACTGGATGATTGATATTACTTCCGGTCTTAGCGACAACCAAATGCAGGATATGCTCCGCA GTGAACACGGCGGCTTAAATGAAACGTTTGCGGATGTAGCGGAAATAACAGGCGATAAGAAATACCTGAAACTGGCACGC CGTTTCTCTCATAAAGTCATTCTCGACCCGCTTATCAAAAACGAAGACAGGTTAAACGGAATGCATGCCAACACACAAAT TCCTAAAGTAATCGGATACAAACGGGTAGCCGAAGTTTCAAAGAATGACAAAGACTGGAATCATGCAGCAGAATGGGATC ATGCAGCCCGTTTTTTCTGGAATACCGTAGTCAATCACCGTTCCGTGTGTATCGGCGGGAACAGCGTACGCGAACATTTT CATCCATCGGACAACTTTACGTCTATGCTGAATGACGTTCAGGGACCGGAGACTTGCAATACTTACAACATGCTCCGGCT GACCAAAATGCTTTATCAGAACTCCGGAGACGTTGACAACTCCAACAAACCGGACCCACGTTATGTAGATTATTATGAAC GTGCACTCTACAATCATATCCTGTCATCACAAGAACCGGATAAAGGCGGATTCGTCTACTTTACTCCGATGCGTCCCGGA CATTATCGGGTATACTCGCAACCGGAAACATCGATGTGGTGCTGTGTCGGTTCAGGCTTGGAAAATCATACCAAGTATGG TGAATTTATTTATGCGCATCAACAAGATACGCTTTACGTCAATCTTTTTATTCCTTCACAACTGAACTGGAAAGAACAAG GCGTTACATTAACGCAGGAAACTCTCTTCCCCGATGATGAAAAAGTTACCTTACGAATAGACAAAGCCGCTAAGAAGAAC CTGACATTAATGATTCGTATACCGGAATGGGCAGGAAACTCAAAAGGGTATGAAATCACCATCAACGGTAAGAAACACCT ATCTGACATACAGACGGGAGCCAGTACGTACCTCCCAATCCGGCGTAAGTGGAAAAAAGGAGATATGATCACCTTCCATC TGCCTATGAAGGTCAGCCTGGAGCAGATTCCCGACAAGAAAGATTACTATGCTTTCTTATACGGTCCCATCGTTCTTGCA ACTTCTACAGGAACAGAAAACCTTGACGGAATCTATGCAGACGACAGCCGCGGCGGTCACATTGCCCACGGTCGGCAAAC ACCTTTGCAGGAGATCCCGATGCTGATCGGGAATCCCGATTCTATCCGCCATTCTCTTCACAAACTGAGCGGAAGCAAAC TAGCTTTTAGTTATGATGGAAACGTTTATCCGACACAAAAGAGTAAATCACTGGAGCTTATTCCGTTTTTCCGCCTGCAT AATTCCCGTTATGCCGTTTACTTCCGCCAAGCCAGTGAAGAACAGTTCAAAACGATTCAGGAAGAAATGGCTACAGCCGA ACGGAAAGCGACCGAACTGGCGAACCGGACAGTTGACCTGATCTTCCCCGGTGAACAGCAACCGGAATCTGATCATAGCA TTCAATATGAAGCTTCCGAAACCGGAACCCACAAAGACCGTCATTTCCGCCGGGCTAAAGGTTGGTTCAGCTATAACCTG AAAATAAAAGAAGAAGCAAGCCAGCTTATGATCACCGTACGGCAAGAAGACCGTAACAAAGCAGTGATCCTGCTGAATAA CGAAAAACTGACCGTTCATCCCACTGTGAGCAAAGCCGACAAAGACGGTTTTATCAGACTCTGTTATCTCCTGCCCCGTA AATTAAAAGTAGGAAGCTGCGAGATTCTTTTTAAGCCGGACGGAACAGAATGGACCTCTGCCGTTTATGAAGTACGCTTA CTGAAGTAA
Upstream 100 bases:
>100_bases CTTCACGGAGACCTTTCTCCCCCTTTCCCTGAATTTAGTATTAACATAAATATCCTCATTCCCTCTCCTTTTTGGAGGGG GTCAGGGGGAAGCTATTATC
Downstream 100 bases:
>100_bases CCGTAAGAACAAGAGAATGATCATCGTAAAAATCAAACTTCTATATAATCATTTAAACAAATTCCATTTATGAAAGCAAA ACTATTAGTCAGCACGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 802; Mature: 802
Protein sequence:
>802_residues MKTTSFILALIISISIGKAQTNHQVSYFSLQDVKLLSSPFLQAQQTDLHYILALDPDRLSAPFLREAGLTPKAPSYTNWE NTGLDGHIGGHYLSALSMMYAATGDTAIYHRLNYMLNELHRAQQAVGTGFIGGTPGSLQLWKEIKAGDIRAGGFSLNGKW VPLYNIHKTYAGLRDAYLYAHSDLARQMLIDLTDWMIDITSGLSDNQMQDMLRSEHGGLNETFADVAEITGDKKYLKLAR RFSHKVILDPLIKNEDRLNGMHANTQIPKVIGYKRVAEVSKNDKDWNHAAEWDHAARFFWNTVVNHRSVCIGGNSVREHF HPSDNFTSMLNDVQGPETCNTYNMLRLTKMLYQNSGDVDNSNKPDPRYVDYYERALYNHILSSQEPDKGGFVYFTPMRPG HYRVYSQPETSMWCCVGSGLENHTKYGEFIYAHQQDTLYVNLFIPSQLNWKEQGVTLTQETLFPDDEKVTLRIDKAAKKN LTLMIRIPEWAGNSKGYEITINGKKHLSDIQTGASTYLPIRRKWKKGDMITFHLPMKVSLEQIPDKKDYYAFLYGPIVLA TSTGTENLDGIYADDSRGGHIAHGRQTPLQEIPMLIGNPDSIRHSLHKLSGSKLAFSYDGNVYPTQKSKSLELIPFFRLH NSRYAVYFRQASEEQFKTIQEEMATAERKATELANRTVDLIFPGEQQPESDHSIQYEASETGTHKDRHFRRAKGWFSYNL KIKEEASQLMITVRQEDRNKAVILLNNEKLTVHPTVSKADKDGFIRLCYLLPRKLKVGSCEILFKPDGTEWTSAVYEVRL LK
Sequences:
>Translated_802_residues MKTTSFILALIISISIGKAQTNHQVSYFSLQDVKLLSSPFLQAQQTDLHYILALDPDRLSAPFLREAGLTPKAPSYTNWE NTGLDGHIGGHYLSALSMMYAATGDTAIYHRLNYMLNELHRAQQAVGTGFIGGTPGSLQLWKEIKAGDIRAGGFSLNGKW VPLYNIHKTYAGLRDAYLYAHSDLARQMLIDLTDWMIDITSGLSDNQMQDMLRSEHGGLNETFADVAEITGDKKYLKLAR RFSHKVILDPLIKNEDRLNGMHANTQIPKVIGYKRVAEVSKNDKDWNHAAEWDHAARFFWNTVVNHRSVCIGGNSVREHF HPSDNFTSMLNDVQGPETCNTYNMLRLTKMLYQNSGDVDNSNKPDPRYVDYYERALYNHILSSQEPDKGGFVYFTPMRPG HYRVYSQPETSMWCCVGSGLENHTKYGEFIYAHQQDTLYVNLFIPSQLNWKEQGVTLTQETLFPDDEKVTLRIDKAAKKN LTLMIRIPEWAGNSKGYEITINGKKHLSDIQTGASTYLPIRRKWKKGDMITFHLPMKVSLEQIPDKKDYYAFLYGPIVLA TSTGTENLDGIYADDSRGGHIAHGRQTPLQEIPMLIGNPDSIRHSLHKLSGSKLAFSYDGNVYPTQKSKSLELIPFFRLH NSRYAVYFRQASEEQFKTIQEEMATAERKATELANRTVDLIFPGEQQPESDHSIQYEASETGTHKDRHFRRAKGWFSYNL KIKEEASQLMITVRQEDRNKAVILLNNEKLTVHPTVSKADKDGFIRLCYLLPRKLKVGSCEILFKPDGTEWTSAVYEVRL LK >Mature_802_residues MKTTSFILALIISISIGKAQTNHQVSYFSLQDVKLLSSPFLQAQQTDLHYILALDPDRLSAPFLREAGLTPKAPSYTNWE NTGLDGHIGGHYLSALSMMYAATGDTAIYHRLNYMLNELHRAQQAVGTGFIGGTPGSLQLWKEIKAGDIRAGGFSLNGKW VPLYNIHKTYAGLRDAYLYAHSDLARQMLIDLTDWMIDITSGLSDNQMQDMLRSEHGGLNETFADVAEITGDKKYLKLAR RFSHKVILDPLIKNEDRLNGMHANTQIPKVIGYKRVAEVSKNDKDWNHAAEWDHAARFFWNTVVNHRSVCIGGNSVREHF HPSDNFTSMLNDVQGPETCNTYNMLRLTKMLYQNSGDVDNSNKPDPRYVDYYERALYNHILSSQEPDKGGFVYFTPMRPG HYRVYSQPETSMWCCVGSGLENHTKYGEFIYAHQQDTLYVNLFIPSQLNWKEQGVTLTQETLFPDDEKVTLRIDKAAKKN LTLMIRIPEWAGNSKGYEITINGKKHLSDIQTGASTYLPIRRKWKKGDMITFHLPMKVSLEQIPDKKDYYAFLYGPIVLA TSTGTENLDGIYADDSRGGHIAHGRQTPLQEIPMLIGNPDSIRHSLHKLSGSKLAFSYDGNVYPTQKSKSLELIPFFRLH NSRYAVYFRQASEEQFKTIQEEMATAERKATELANRTVDLIFPGEQQPESDHSIQYEASETGTHKDRHFRRAKGWFSYNL KIKEEASQLMITVRQEDRNKAVILLNNEKLTVHPTVSKADKDGFIRLCYLLPRKLKVGSCEILFKPDGTEWTSAVYEVRL LK
Specific function: Unknown
COG id: COG3533
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91340; Mature: 91340
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTSFILALIISISIGKAQTNHQVSYFSLQDVKLLSSPFLQAQQTDLHYILALDPDRLS CCHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHCCCCCCCCCCEEEEEEECCCCCC APFLREAGLTPKAPSYTNWENTGLDGHIGGHYLSALSMMYAATGDTAIYHRLNYMLNELH CCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RAQQAVGTGFIGGTPGSLQLWKEIKAGDIRAGGFSLNGKWVPLYNIHKTYAGLRDAYLYA HHHHHHCCCCCCCCCCHHHHHHHHCCCCEEECCEECCCEEEEEEEHHHHHHHHHHHHEEH HSDLARQMLIDLTDWMIDITSGLSDNQMQDMLRSEHGGLNETFADVAEITGDKKYLKLAR HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHH RFSHKVILDPLIKNEDRLNGMHANTQIPKVIGYKRVAEVSKNDKDWNHAAEWDHAARFFW HHCCCEEECHHHCCCHHCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH NTVVNHRSVCIGGNSVREHFHPSDNFTSMLNDVQGPETCNTYNMLRLTKMLYQNSGDVDN HHHHCCCEEEECCCHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCC SNKPDPRYVDYYERALYNHILSSQEPDKGGFVYFTPMRPGHYRVYSQPETSMWCCVGSGL CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEECCCCCCEEEEECCCC ENHTKYGEFIYAHQQDTLYVNLFIPSQLNWKEQGVTLTQETLFPDDEKVTLRIDKAAKKN CCCCCCCCEEEEECCCEEEEEEEECCCCCCHHCCCEEEHHHCCCCCCEEEEEEECCCCCC LTLMIRIPEWAGNSKGYEITINGKKHLSDIQTGASTYLPIRRKWKKGDMITFHLPMKVSL CEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCHHHCCCCCCEEEEEECCEEEH EQIPDKKDYYAFLYGPIVLATSTGTENLDGIYADDSRGGHIAHGRQTPLQEIPMLIGNPD HHCCCCCCEEEEEEEEEEEEECCCCCCCCCEEECCCCCCEECCCCCCCHHHCCHHCCCHH SIRHSLHKLSGSKLAFSYDGNVYPTQKSKSLELIPFFRLHNSRYAVYFRQASEEQFKTIQ HHHHHHHHCCCCEEEEEECCCEECCCCCCCEEEEEEEEECCCEEEEEEECCCHHHHHHHH EEMATAERKATELANRTVDLIFPGEQQPESDHSIQYEASETGTHKDRHFRRAKGWFSYNL HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCEEEEEE KIKEEASQLMITVRQEDRNKAVILLNNEKLTVHPTVSKADKDGFIRLCYLLPRKLKVGSC EECCCCCEEEEEEEECCCCCEEEEECCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCE EILFKPDGTEWTSAVYEVRLLK EEEECCCCCHHHHEEEEEEECC >Mature Secondary Structure MKTTSFILALIISISIGKAQTNHQVSYFSLQDVKLLSSPFLQAQQTDLHYILALDPDRLS CCHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHCCCCCCCCCCEEEEEEECCCCCC APFLREAGLTPKAPSYTNWENTGLDGHIGGHYLSALSMMYAATGDTAIYHRLNYMLNELH CCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH RAQQAVGTGFIGGTPGSLQLWKEIKAGDIRAGGFSLNGKWVPLYNIHKTYAGLRDAYLYA HHHHHHCCCCCCCCCCHHHHHHHHCCCCEEECCEECCCEEEEEEEHHHHHHHHHHHHEEH HSDLARQMLIDLTDWMIDITSGLSDNQMQDMLRSEHGGLNETFADVAEITGDKKYLKLAR HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHH RFSHKVILDPLIKNEDRLNGMHANTQIPKVIGYKRVAEVSKNDKDWNHAAEWDHAARFFW HHCCCEEECHHHCCCHHCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH NTVVNHRSVCIGGNSVREHFHPSDNFTSMLNDVQGPETCNTYNMLRLTKMLYQNSGDVDN HHHHCCCEEEECCCHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCC SNKPDPRYVDYYERALYNHILSSQEPDKGGFVYFTPMRPGHYRVYSQPETSMWCCVGSGL CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEECCCCCCEEEEECCCC ENHTKYGEFIYAHQQDTLYVNLFIPSQLNWKEQGVTLTQETLFPDDEKVTLRIDKAAKKN CCCCCCCCEEEEECCCEEEEEEEECCCCCCHHCCCEEEHHHCCCCCCEEEEEEECCCCCC LTLMIRIPEWAGNSKGYEITINGKKHLSDIQTGASTYLPIRRKWKKGDMITFHLPMKVSL CEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCHHHCCCCCCEEEEEECCEEEH EQIPDKKDYYAFLYGPIVLATSTGTENLDGIYADDSRGGHIAHGRQTPLQEIPMLIGNPD HHCCCCCCEEEEEEEEEEEEECCCCCCCCCEEECCCCCCEECCCCCCCHHHCCHHCCCHH SIRHSLHKLSGSKLAFSYDGNVYPTQKSKSLELIPFFRLHNSRYAVYFRQASEEQFKTIQ HHHHHHHHCCCCEEEEEECCCEECCCCCCCEEEEEEEEECCCEEEEEEECCCHHHHHHHH EEMATAERKATELANRTVDLIFPGEQQPESDHSIQYEASETGTHKDRHFRRAKGWFSYNL HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCEEEEEE KIKEEASQLMITVRQEDRNKAVILLNNEKLTVHPTVSKADKDGFIRLCYLLPRKLKVGSC EECCCCCEEEEEEEECCCCCEEEEECCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCE EILFKPDGTEWTSAVYEVRLLK EEEECCCCCHHHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA