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The map label for this gene is xylB [H]

Identifier: 29345760

GI number: 29345760

Start: 421849

End: 423444

Strand: Reverse

Name: xylB [H]

Synonym: BT_0350

Alternate gene names: 29345760

Gene position: 423444-421849 (Counterclockwise)

Preceding gene: 29345761

Following gene: 29345759

Centisome position: 6.76

GC content: 47.43

Gene sequence:

>1596_bases
ATGAAATTAGATGCAAAATCAACCATCGAGACAGGTAAAGCTATCCTTGGCATAGAACTCGGTTCTACACGAATAAAAGC
TGTTCTGATTGACCAGGAAAACAAACCTATCGCTCAAGGCAGCCACACATGGGAAAATCAACTGGTCAACGGACTTTGGA
CTTACAGCATTGATGCCATCTGGTCCGGACTGCAAGATTGCTACGCCGACCTCCGCTCCAACGTGAAGAAATTATACGAC
ACAGAGATCGAAACACTGGCAGCCATCGGTGTCAGCGCCATGATGCATGGTTACATGCCTTTCAATGAAAAAGAAGAAAT
CCTCGTGCCTTTCCGCACTTGGAGAAATACCAATACAGGCCGTGCTGCGGCAGAATTATCCGAATTATTTGTCTATAACA
TCCCTTTGAGATGGAGCATTTCTCATTTGTACCAGGCTATTCTGGACAACGAAGCGCACGTCAAAGACATCAAGTTCCTG
ACAACTCTTGCAGGTTATGTACATTGGCAGATAACAGGCGAAAAGGTGTTGGGCATTGGTGACGCATCGGGTATGCTCCC
CATAGATCCGACTACCAACAACTATTCCGCCGAAATGGTGGCCAAATTCAACAATCTGATTGCTTCGAAAGAATACAGTT
GGAAACTGGAAGACATTCTGCCCAAAGTATTGTCGGCTGGTGAAAATGCCGGTGTCCTCACACCGGAAGGCTGTAAAAAA
CTCGATGCATCCGGTCATCTGAAGGCAGGAATACCGGTCTGCCCACCGGAAGGAGACGCAGGCACCGGCATGGTAGCAAC
CAACGCCGTCAAGCAACGCACCGGCAACGTATCGGCAGGTACTTCTTCTTTCTCTATGATCGTATTGGAAAAAGAATTGT
CGAAGCCATACGAAATGATCGACATGGTCACCACTCCCGACGGAAGCCTCGTAGCCATGGTACATTGCAACAACTGTACT
TCGGATCTTAACGCATGGGTCAACCTGTTCAAAGAATACCAGGAACTTCTGGGTATACCTGTAGATATGGATGAACTCTA
TGGCAAACTTTATAACATTGCCCTTACCGGTGATACCGATTGCGGTGGTCTCCTCTCCTACAACTACATTTCAGGCGAAC
CTGTTACGGGACTTGCCGAGGGAAGACCTTTGTTCGTACGTTCGGCCAATGACAAGTTCAACCTTGCAAACTTTATGCGG
GCTCATTTGTACGCCTCAGTCGGAGTTCTCAAGATTGGCAACGACATCTTGTTCAACGAAGAAAAGATCAAAGTCGACAG
AATCACAGGTCACGGAGGATTGTTCAGAACCAAAGGAGTCGGTCAAAGAGTACTTGCAGCAGCCATCAACTCGCCCATAT
CTGTTATGGAAACAGCCGGTGAAGGCGGTGCATGGGGAATTGCCCTGCTGGGTTCTTACCTGGTAAACAATAAAAAGGGT
CAATCTCTTGCCGATTTCCTGGATGAAAGTGTATTTGTCAGCGATGCTGGTGTCGAGGTATCACCCACACCCGAAGATGT
AGCCGGCTTCAACACATACATCGAAAGCTACAAGGCAGGTTTGCCTATAGAAGAAGCAGCCGTCAAATTCAAATAA

Upstream 100 bases:

>100_bases
TTTAATTCAACCCGAATTAAAGACACTTCCGCCTTTTGAAAGCAGACTCAGTTTTTGTTCTCCACACTTATTGTTATACC
TTAAAATATCGGTTTCCAAC

Downstream 100 bases:

>100_bases
GCGGCTTCACGGAGACCTTTCTCCCCCTTTCCCTGAATTTAGTATTAACATAAATATCCTCATTCCCTCTCCTTTTTGGA
GGGGGTCAGGGGGAAGCTAT

Product: xylulose kinase

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MKLDAKSTIETGKAILGIELGSTRIKAVLIDQENKPIAQGSHTWENQLVNGLWTYSIDAIWSGLQDCYADLRSNVKKLYD
TEIETLAAIGVSAMMHGYMPFNEKEEILVPFRTWRNTNTGRAAAELSELFVYNIPLRWSISHLYQAILDNEAHVKDIKFL
TTLAGYVHWQITGEKVLGIGDASGMLPIDPTTNNYSAEMVAKFNNLIASKEYSWKLEDILPKVLSAGENAGVLTPEGCKK
LDASGHLKAGIPVCPPEGDAGTGMVATNAVKQRTGNVSAGTSSFSMIVLEKELSKPYEMIDMVTTPDGSLVAMVHCNNCT
SDLNAWVNLFKEYQELLGIPVDMDELYGKLYNIALTGDTDCGGLLSYNYISGEPVTGLAEGRPLFVRSANDKFNLANFMR
AHLYASVGVLKIGNDILFNEEKIKVDRITGHGGLFRTKGVGQRVLAAAINSPISVMETAGEGGAWGIALLGSYLVNNKKG
QSLADFLDESVFVSDAGVEVSPTPEDVAGFNTYIESYKAGLPIEEAAVKFK

Sequences:

>Translated_531_residues
MKLDAKSTIETGKAILGIELGSTRIKAVLIDQENKPIAQGSHTWENQLVNGLWTYSIDAIWSGLQDCYADLRSNVKKLYD
TEIETLAAIGVSAMMHGYMPFNEKEEILVPFRTWRNTNTGRAAAELSELFVYNIPLRWSISHLYQAILDNEAHVKDIKFL
TTLAGYVHWQITGEKVLGIGDASGMLPIDPTTNNYSAEMVAKFNNLIASKEYSWKLEDILPKVLSAGENAGVLTPEGCKK
LDASGHLKAGIPVCPPEGDAGTGMVATNAVKQRTGNVSAGTSSFSMIVLEKELSKPYEMIDMVTTPDGSLVAMVHCNNCT
SDLNAWVNLFKEYQELLGIPVDMDELYGKLYNIALTGDTDCGGLLSYNYISGEPVTGLAEGRPLFVRSANDKFNLANFMR
AHLYASVGVLKIGNDILFNEEKIKVDRITGHGGLFRTKGVGQRVLAAAINSPISVMETAGEGGAWGIALLGSYLVNNKKG
QSLADFLDESVFVSDAGVEVSPTPEDVAGFNTYIESYKAGLPIEEAAVKFK
>Mature_531_residues
MKLDAKSTIETGKAILGIELGSTRIKAVLIDQENKPIAQGSHTWENQLVNGLWTYSIDAIWSGLQDCYADLRSNVKKLYD
TEIETLAAIGVSAMMHGYMPFNEKEEILVPFRTWRNTNTGRAAAELSELFVYNIPLRWSISHLYQAILDNEAHVKDIKFL
TTLAGYVHWQITGEKVLGIGDASGMLPIDPTTNNYSAEMVAKFNNLIASKEYSWKLEDILPKVLSAGENAGVLTPEGCKK
LDASGHLKAGIPVCPPEGDAGTGMVATNAVKQRTGNVSAGTSSFSMIVLEKELSKPYEMIDMVTTPDGSLVAMVHCNNCT
SDLNAWVNLFKEYQELLGIPVDMDELYGKLYNIALTGDTDCGGLLSYNYISGEPVTGLAEGRPLFVRSANDKFNLANFMR
AHLYASVGVLKIGNDILFNEEKIKVDRITGHGGLFRTKGVGQRVLAAAINSPISVMETAGEGGAWGIALLGSYLVNNKKG
QSLADFLDESVFVSDAGVEVSPTPEDVAGFNTYIESYKAGLPIEEAAVKFK

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 57689; Mature: 57689

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS01047 HMA_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDAKSTIETGKAILGIELGSTRIKAVLIDQENKPIAQGSHTWENQLVNGLWTYSIDAI
CCCCCCHHHHCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHEEEHHHH
WSGLQDCYADLRSNVKKLYDTEIETLAAIGVSAMMHGYMPFNEKEEILVPFRTWRNTNTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHCCCCCCC
RAAAELSELFVYNIPLRWSISHLYQAILDNEAHVKDIKFLTTLAGYVHWQITGEKVLGIG
HHHHHHHHHEEEECCCEECHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEECCEEEEEC
DASGMLPIDPTTNNYSAEMVAKFNNLIASKEYSWKLEDILPKVLSAGENAGVLTPEGCKK
CCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCHHHHH
LDASGHLKAGIPVCPPEGDAGTGMVATNAVKQRTGNVSAGTSSFSMIVLEKELSKPYEMI
CCCCCCEECCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCCCCCEEEEEEEHHHCCCHHHH
DMVTTPDGSLVAMVHCNNCTSDLNAWVNLFKEYQELLGIPVDMDELYGKLYNIALTGDTD
EEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEEEECCCC
CGGLLSYNYISGEPVTGLAEGRPLFVRSANDKFNLANFMRAHLYASVGVLKIGNDILFNE
CCCCEEECEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCEEECC
EKIKVDRITGHGGLFRTKGVGQRVLAAAINSPISVMETAGEGGAWGIALLGSYLVNNKKG
CEEEEEEEECCCCCEECCCCHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCC
QSLADFLDESVFVSDAGVEVSPTPEDVAGFNTYIESYKAGLPIEEAAVKFK
CHHHHHHCCCEEEECCCEECCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCC
>Mature Secondary Structure
MKLDAKSTIETGKAILGIELGSTRIKAVLIDQENKPIAQGSHTWENQLVNGLWTYSIDAI
CCCCCCHHHHCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHEEEHHHH
WSGLQDCYADLRSNVKKLYDTEIETLAAIGVSAMMHGYMPFNEKEEILVPFRTWRNTNTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHCCCCCCC
RAAAELSELFVYNIPLRWSISHLYQAILDNEAHVKDIKFLTTLAGYVHWQITGEKVLGIG
HHHHHHHHHEEEECCCEECHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEECCEEEEEC
DASGMLPIDPTTNNYSAEMVAKFNNLIASKEYSWKLEDILPKVLSAGENAGVLTPEGCKK
CCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCHHHHH
LDASGHLKAGIPVCPPEGDAGTGMVATNAVKQRTGNVSAGTSSFSMIVLEKELSKPYEMI
CCCCCCEECCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCCCCCEEEEEEEHHHCCCHHHH
DMVTTPDGSLVAMVHCNNCTSDLNAWVNLFKEYQELLGIPVDMDELYGKLYNIALTGDTD
EEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEEEECCCC
CGGLLSYNYISGEPVTGLAEGRPLFVRSANDKFNLANFMRAHLYASVGVLKIGNDILFNE
CCCCEEECEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCEEECC
EKIKVDRITGHGGLFRTKGVGQRVLAAAINSPISVMETAGEGGAWGIALLGSYLVNNKKG
CEEEEEEEECCCCCEECCCCHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCC
QSLADFLDESVFVSDAGVEVSPTPEDVAGFNTYIESYKAGLPIEEAAVKFK
CHHHHHHCCCEEEECCCEECCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]