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The map label for this gene is asdII [H]

Identifier: 29345758

GI number: 29345758

Start: 417722

End: 419266

Strand: Reverse

Name: asdII [H]

Synonym: BT_0348

Alternate gene names: 29345758

Gene position: 419266-417722 (Counterclockwise)

Preceding gene: 29345759

Following gene: 29345757

Centisome position: 6.7

GC content: 44.53

Gene sequence:

>1545_bases
ATGAAAGCAAAACTATTAGTCAGCACGGCCTTTCTGGCAGCCTCGGTATCTCTTTCTGCACAAAAGAGTGCTACCATCAC
TGTACATGCCGACCAAGGCAAAGAAATTATCCCGAAGGAAATCTACGGTCAATTTGCCGAACACCTGGGTTCATGTATCT
ACGGTGGTCTTTGGGTAGGCGAAAATTCGGATATTCCTAATATCAAAGGATACCGCACGGACGTATTTAATGCATTAAAA
GACTTGTCTGTTCCTGTTCTCCGCTGGCCGGGCGGCTGCTTTGCAGACGAATATCACTGGATGGACGGTATCGGTCCCAA
AGAAAACCGCCCGAAGATGGTGAACAACAACTGGGGAGGAACGATTGAAGACAACAGTTTCGGAACACACGAATTTCTGA
ACCTTTGCGAAATGCTGGGCTGCGAACCATATATAAGTGGAAACGTAGGCAGCGGCACGGTAGAAGAACTCGCCAAATGG
GTGGAGTACATGACTTCCGACGGTGATTCTCCAATGGCAAATCTGCGTCGCAAGAATGGCCGAGACAAGGCATGGAAAGT
AAAATATCTCGGTGTAGGAAATGAAAGCTGGGGATGCGGCGGCAGCATGCGTCCTGAATATTATGCCGATCTGTATCGCC
GTTATTCTACTTATTGCCGTAACTATGACGGTAATCATCTGTTTAAGATAGCCAGTGGTGCCAGTGATTACGACTATAAC
TGGACGGATGTACTGATGAATCGTGTCGGTCACCGGATGCAAGGTCTATCCTTACACTACTATACAGTTACAGGATGGAG
CGGCAGCAAAGGTGCGGCAACCAAATTCAACAAAGATGATTTTTACTGGACGATGGGCAAATGTCTTGAAGTGGAAGATG
TCATCAAAAAACATTGCGCCATCATGGACAAATATGATAAAGACAAGAAGATTGCCCTTTTGCTTGACGAATGGGGCACT
TGGTGGGACGAAGAACCAGGAACGGTCAGAGGTCATCTGTATCAGCAAAACACATTGCGTGATGCCTTCGTTGCTTCTTT
AAGCCTCGATGTATTCCACAAATATACCGACCGTCTGAAAATGGCGAACATTGCTCAGATAGTCAACGTTCTGCAATCTA
TGATCCTGACTAAAGACAAAGATATGGTACTTACTCCTACTTATTATGTATTTAAGATGTACAAAGTGCATCAGGATGCA
ACCTATCTTCCACTCGACCTGACTTGCGAGAAAATGAACGTACGCGATAACCGTACAGTTCCCATGGTCAGCGCAACAGC
TTCTAAGAACAAGAACGGAGTGATCCATATTTCTCTCTCCAACGTAGATGCAGACAACGCACAGGAAATCACAGTCAATC
TTCCGGACGTAAATGCCAAAAAGGCGATTGGAGAAATCCTGACTTCTGCTAATCTGACTGATTACAACTCTTTCGAAAAA
CCTAATATTGTAAAACCGGCTTCCTTCAAAGAGGTAAAAATCAATAAAGGAATTATGAAGGTAAAACTACCGGCTAAGTC
AATTGTTACTTTAGAGTTACAGTAA

Upstream 100 bases:

>100_bases
TGCCGTTTATGAAGTACGCTTACTGAAGTAACCGTAAGAACAAGAGAATGATCATCGTAAAAATCAAACTTCTATATAAT
CATTTAAACAAATTCCATTT

Downstream 100 bases:

>100_bases
TCTAATAGTAAATACTTACTGTATTGTAAACAAGAAGGCTGTTAAAAAGCCTACAAAAAAGATAGCTCTTTTGGATGGTT
AATTACACATAAAGAGCTAT

Product: alpha-L-arabinofuranosidase

Products: NA

Alternate protein names: Arabinosidase 2 [H]

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MKAKLLVSTAFLAASVSLSAQKSATITVHADQGKEIIPKEIYGQFAEHLGSCIYGGLWVGENSDIPNIKGYRTDVFNALK
DLSVPVLRWPGGCFADEYHWMDGIGPKENRPKMVNNNWGGTIEDNSFGTHEFLNLCEMLGCEPYISGNVGSGTVEELAKW
VEYMTSDGDSPMANLRRKNGRDKAWKVKYLGVGNESWGCGGSMRPEYYADLYRRYSTYCRNYDGNHLFKIASGASDYDYN
WTDVLMNRVGHRMQGLSLHYYTVTGWSGSKGAATKFNKDDFYWTMGKCLEVEDVIKKHCAIMDKYDKDKKIALLLDEWGT
WWDEEPGTVRGHLYQQNTLRDAFVASLSLDVFHKYTDRLKMANIAQIVNVLQSMILTKDKDMVLTPTYYVFKMYKVHQDA
TYLPLDLTCEKMNVRDNRTVPMVSATASKNKNGVIHISLSNVDADNAQEITVNLPDVNAKKAIGEILTSANLTDYNSFEK
PNIVKPASFKEVKINKGIMKVKLPAKSIVTLELQ

Sequences:

>Translated_514_residues
MKAKLLVSTAFLAASVSLSAQKSATITVHADQGKEIIPKEIYGQFAEHLGSCIYGGLWVGENSDIPNIKGYRTDVFNALK
DLSVPVLRWPGGCFADEYHWMDGIGPKENRPKMVNNNWGGTIEDNSFGTHEFLNLCEMLGCEPYISGNVGSGTVEELAKW
VEYMTSDGDSPMANLRRKNGRDKAWKVKYLGVGNESWGCGGSMRPEYYADLYRRYSTYCRNYDGNHLFKIASGASDYDYN
WTDVLMNRVGHRMQGLSLHYYTVTGWSGSKGAATKFNKDDFYWTMGKCLEVEDVIKKHCAIMDKYDKDKKIALLLDEWGT
WWDEEPGTVRGHLYQQNTLRDAFVASLSLDVFHKYTDRLKMANIAQIVNVLQSMILTKDKDMVLTPTYYVFKMYKVHQDA
TYLPLDLTCEKMNVRDNRTVPMVSATASKNKNGVIHISLSNVDADNAQEITVNLPDVNAKKAIGEILTSANLTDYNSFEK
PNIVKPASFKEVKINKGIMKVKLPAKSIVTLELQ
>Mature_514_residues
MKAKLLVSTAFLAASVSLSAQKSATITVHADQGKEIIPKEIYGQFAEHLGSCIYGGLWVGENSDIPNIKGYRTDVFNALK
DLSVPVLRWPGGCFADEYHWMDGIGPKENRPKMVNNNWGGTIEDNSFGTHEFLNLCEMLGCEPYISGNVGSGTVEELAKW
VEYMTSDGDSPMANLRRKNGRDKAWKVKYLGVGNESWGCGGSMRPEYYADLYRRYSTYCRNYDGNHLFKIASGASDYDYN
WTDVLMNRVGHRMQGLSLHYYTVTGWSGSKGAATKFNKDDFYWTMGKCLEVEDVIKKHCAIMDKYDKDKKIALLLDEWGT
WWDEEPGTVRGHLYQQNTLRDAFVASLSLDVFHKYTDRLKMANIAQIVNVLQSMILTKDKDMVLTPTYYVFKMYKVHQDA
TYLPLDLTCEKMNVRDNRTVPMVSATASKNKNGVIHISLSNVDADNAQEITVNLPDVNAKKAIGEILTSANLTDYNSFEK
PNIVKPASFKEVKINKGIMKVKLPAKSIVTLELQ

Specific function: Unknown

COG id: COG3534

COG function: function code G; Alpha-L-arabinofuranosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010720
- InterPro:   IPR013780
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF06964 Alpha-L-AF_C [H]

EC number: =3.2.1.55 [H]

Molecular weight: Translated: 57907; Mature: 57907

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAKLLVSTAFLAASVSLSAQKSATITVHADQGKEIIPKEIYGQFAEHLGSCIYGGLWVG
CCCEEEEHHHHHHHHEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEC
ENSDIPNIKGYRTDVFNALKDLSVPVLRWPGGCFADEYHWMDGIGPKENRPKMVNNNWGG
CCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TIEDNSFGTHEFLNLCEMLGCEPYISGNVGSGTVEELAKWVEYMTSDGDSPMANLRRKNG
EECCCCCCHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCC
RDKAWKVKYLGVGNESWGCGGSMRPEYYADLYRRYSTYCRNYDGNHLFKIASGASDYDYN
CCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC
WTDVLMNRVGHRMQGLSLHYYTVTGWSGSKGAATKFNKDDFYWTMGKCLEVEDVIKKHCA
HHHHHHHHHCHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHH
IMDKYDKDKKIALLLDEWGTWWDEEPGTVRGHLYQQNTLRDAFVASLSLDVFHKYTDRLK
HHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
MANIAQIVNVLQSMILTKDKDMVLTPTYYVFKMYKVHQDATYLPLDLTCEKMNVRDNRTV
HHHHHHHHHHHHHHHHCCCCCEEECCHHHEEEEEEECCCCEEEEEEEEEEECCCCCCCCC
PMVSATASKNKNGVIHISLSNVDADNAQEITVNLPDVNAKKAIGEILTSANLTDYNSFEK
EEEEECCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCC
PNIVKPASFKEVKINKGIMKVKLPAKSIVTLELQ
CCCCCCCCCCEEEECCCEEEEEECCCEEEEEEEC
>Mature Secondary Structure
MKAKLLVSTAFLAASVSLSAQKSATITVHADQGKEIIPKEIYGQFAEHLGSCIYGGLWVG
CCCEEEEHHHHHHHHEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEC
ENSDIPNIKGYRTDVFNALKDLSVPVLRWPGGCFADEYHWMDGIGPKENRPKMVNNNWGG
CCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TIEDNSFGTHEFLNLCEMLGCEPYISGNVGSGTVEELAKWVEYMTSDGDSPMANLRRKNG
EECCCCCCHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCC
RDKAWKVKYLGVGNESWGCGGSMRPEYYADLYRRYSTYCRNYDGNHLFKIASGASDYDYN
CCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC
WTDVLMNRVGHRMQGLSLHYYTVTGWSGSKGAATKFNKDDFYWTMGKCLEVEDVIKKHCA
HHHHHHHHHCHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHH
IMDKYDKDKKIALLLDEWGTWWDEEPGTVRGHLYQQNTLRDAFVASLSLDVFHKYTDRLK
HHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
MANIAQIVNVLQSMILTKDKDMVLTPTYYVFKMYKVHQDATYLPLDLTCEKMNVRDNRTV
HHHHHHHHHHHHHHHHCCCCCEEECCHHHEEEEEEECCCCEEEEEEEEEEECCCCCCCCC
PMVSATASKNKNGVIHISLSNVDADNAQEITVNLPDVNAKKAIGEILTSANLTDYNSFEK
EEEEECCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCC
PNIVKPASFKEVKINKGIMKVKLPAKSIVTLELQ
CCCCCCCCCCEEEECCCEEEEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA