Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345691

Identifier: 29345691

GI number: 29345691

Start: 326008

End: 326649

Strand: Reverse

Name: 29345691

Synonym: BT_0281

Alternate gene names: NA

Gene position: 326649-326008 (Counterclockwise)

Preceding gene: 29345699

Following gene: 29345676

Centisome position: 5.22

GC content: 39.25

Gene sequence:

>642_bases
ATGGCAGTACAATTTGAATTATATAAGACTCCGATGCCAAAGGAGAAAAAGAACAAGACGCGTTATCATGCCCGTCCGGT
AAGTTTTGAGACCGTCAATACCGAGAAACTGGCTTATCGCATCCATGATCGCTCCACATTAAGAGTATCGGACATTATTT
CAACCTTGGAAGAACTGAAAAATGAAGTAGCTCAGTGCCTCCTGGAAGGTAAAAAGGTGCATGTCGATGGATTAGGATTC
TTTCAGGTCACTCTTTCCTGCGAAGAAGAAATACGTAACCCGAAAGACAAACGTGTGCACCGGGTAAAATTGAAAGCTAT
AAAGTTTAAAGCTGATAAAGAATTGAAAGGGGAATTGTGTCACATGAAATTCCAGCGTTCTAAAATCAGACCGCACTCCG
CCAATTTATCAGAAGTAGAAATAGACATGAAACTAACTGAATATTTTGCTGAAAATCAGATTATCACCCGGAAAGATTTT
CAATATCTCTGCGGAATGACACAAATCACTGCATATCGCCATATCAAGAGGTTAATGGCAGAAAAGAAATTGCAAAATAA
AGGGACGATCTATCAACCGATATATACTCCGGTTCCGGGTAATTACAGGGTATCGGTGGATTTAAAATATAAAGAACAAT
GA

Upstream 100 bases:

>100_bases
GATAAAATAACATCATTATTGTGATAAGATCTTATCATAGTAATGATAAGTATAAAATATCAGCACTAAAAACAAGAAAT
CATTTAAAGATAAAGCAGAA

Downstream 100 bases:

>100_bases
AAGAGCCATGAAACAGGAAGCCCTTCACCCGCTCTTCCCCATTTGGGGAGTGTAATTTAAACTCTGTCTGGTTTCTATTT
CTTTTAAATCACAACAAATA

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MAVQFELYKTPMPKEKKNKTRYHARPVSFETVNTEKLAYRIHDRSTLRVSDIISTLEELKNEVAQCLLEGKKVHVDGLGF
FQVTLSCEEEIRNPKDKRVHRVKLKAIKFKADKELKGELCHMKFQRSKIRPHSANLSEVEIDMKLTEYFAENQIITRKDF
QYLCGMTQITAYRHIKRLMAEKKLQNKGTIYQPIYTPVPGNYRVSVDLKYKEQ

Sequences:

>Translated_213_residues
MAVQFELYKTPMPKEKKNKTRYHARPVSFETVNTEKLAYRIHDRSTLRVSDIISTLEELKNEVAQCLLEGKKVHVDGLGF
FQVTLSCEEEIRNPKDKRVHRVKLKAIKFKADKELKGELCHMKFQRSKIRPHSANLSEVEIDMKLTEYFAENQIITRKDF
QYLCGMTQITAYRHIKRLMAEKKLQNKGTIYQPIYTPVPGNYRVSVDLKYKEQ
>Mature_212_residues
AVQFELYKTPMPKEKKNKTRYHARPVSFETVNTEKLAYRIHDRSTLRVSDIISTLEELKNEVAQCLLEGKKVHVDGLGFF
QVTLSCEEEIRNPKDKRVHRVKLKAIKFKADKELKGELCHMKFQRSKIRPHSANLSEVEIDMKLTEYFAENQIITRKDFQ
YLCGMTQITAYRHIKRLMAEKKLQNKGTIYQPIYTPVPGNYRVSVDLKYKEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25084; Mature: 24952

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVQFELYKTPMPKEKKNKTRYHARPVSFETVNTEKLAYRIHDRSTLRVSDIISTLEELK
CCEEEEEECCCCCCCCCCCCCEEECCCEEEECCHHHEEEEECCCCEEEHHHHHHHHHHHH
NEVAQCLLEGKKVHVDGLGFFQVTLSCEEEIRNPKDKRVHRVKLKAIKFKADKELKGELC
HHHHHHHHCCCEEEECCCEEEEEEEECHHHHCCCHHHHHHHEEEEEEEECCCCCHHHHHH
HMKFQRSKIRPHSANLSEVEIDMKLTEYFAENQIITRKDFQYLCGMTQITAYRHIKRLMA
HHHHHHHCCCCCCCCCCEEEEHHHHHHHHHCCCEECHHHHHHHHCHHHHHHHHHHHHHHH
EKKLQNKGTIYQPIYTPVPGNYRVSVDLKYKEQ
HHHHHCCCCEECCEECCCCCCEEEEEEEEECCC
>Mature Secondary Structure 
AVQFELYKTPMPKEKKNKTRYHARPVSFETVNTEKLAYRIHDRSTLRVSDIISTLEELK
CEEEEEECCCCCCCCCCCCCEEECCCEEEECCHHHEEEEECCCCEEEHHHHHHHHHHHH
NEVAQCLLEGKKVHVDGLGFFQVTLSCEEEIRNPKDKRVHRVKLKAIKFKADKELKGELC
HHHHHHHHCCCEEEECCCEEEEEEEECHHHHCCCHHHHHHHEEEEEEEECCCCCHHHHHH
HMKFQRSKIRPHSANLSEVEIDMKLTEYFAENQIITRKDFQYLCGMTQITAYRHIKRLMA
HHHHHHHCCCCCCCCCCEEEEHHHHHHHHHCCCEECHHHHHHHHCHHHHHHHHHHHHHHH
EKKLQNKGTIYQPIYTPVPGNYRVSVDLKYKEQ
HHHHHCCCCEECCEECCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA