Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345699

Identifier: 29345699

GI number: 29345699

Start: 334208

End: 336898

Strand: Reverse

Name: 29345699

Synonym: BT_0289

Alternate gene names: NA

Gene position: 336898-334208 (Counterclockwise)

Preceding gene: 29345713

Following gene: 29345691

Centisome position: 5.38

GC content: 38.13

Gene sequence:

>2691_bases
ATGAATAAAACGACTTTTATACTACTAATAACATTAATTATATCATACATAAATACTGCTTATATTCAAGCACAGACTCA
ACGTGTCACAGTACAGGGGAGTATTCTGGAAAAAGACACACAGTTCCCTGTTGAGCAAGCTACCATACAACTGTTATCCT
TGCCCGACAGTAATTATGTAAAAGGCATTTCCAGCTTGGAACAGGGAAAATTTTCACTCACAACTCTCCCGGGACGTTTT
TTGCTAAAAATTTCTTTCATAGGCCTCGCTACCGAATATAAGCCCCTGCAAATAAACACAACCCAGACTATTGTTCAACT
AGGCAAAATAGAGTTGAAACCTGATGCTGTACTTCTTAACGAAACCGTCATTGTAGCCCAAGCCCCGCCTGTTGTCGTCA
CAGGTGATACAACCGCATATAATACTTCCGCTTACCGCGTCAGTGAAGGTGCTGCATTGGAAGAACTAGTCAAAAAGCTA
CCCGGAGCCGAAATAAACGAAGAAGGGAAATTAATCATTAATGGTCAGGAAGTCAAAAAAATCATGATGAACGGAGAAGA
ATTCTTCCTTAACGACCCCAATACGGTTTTAAAAGAACTGCCAGCCGATATGATAGATCAACTAAAAACTTACCAAAAGA
AATCAGACATGGCACGTATTACCGGAGTAGATGACGGTAAAGAAGAAATGGTACTCGACTTACGCGTAAAACCAAGTATG
AGAAAAGGATGGAATGGTAACTTTGAAGCAGGATATGGAAATGACGACCATTATAGGGCAAAAGGAATGGCCAATCGTTT
CAAAAACAAAATGAACTTATCAATCAATGGTACCGCCAACGACAATGGAATTAATTCCAATCAAAGAATAGGTGCCAACT
ATTCTCAGAATACTCAGAAACTCAAATATGGAGGTAGTATTGAAGTCCGGGAAAATAAACGCGATTCATGGAGCAAGCGT
CATACAGAATCTTTTTTGTCAGACAACACTTCTCAGTTTTCCCTGCAGAACAACCAATCCGATGGAAAGACAAGTGCTAT
TTCCGCTAATTTTCGTTTCGAATGGAAATTAGACAGCCTCACCACTATTATGTATCGACCGACATTTAATTTTTCCAAAG
GAAACTCCAATTCAGGCAACTTCTCAGAAACGCTCAACAACGAGTCAACTCCTATCAACCGGAAAGAAGCCACAAACCAC
CAAACGAATGACAGATTCTCCACCAATGGCTCTTTGCAGTTGAACCGCAAATTAAACAGCAAAGGAAGAAACATCGCCTT
ACGTCTTTATTACGATCTGGATGACGGCAATTCCGATCGGTATAGTCTTTCGAATACTTATTACTTGAAGTATGGTGATA
GTATAAAAACTTTGAACCAATGGATTGAAAAACTTGACAAAAACAATAAATATCAAGTTCAGATAACATATATGGAACCT
GTATTTACCAATCGGTTTATCGAAATTAATTATAGCTATCAACACCGTTCCTCACTCTCTGAAAAATATGCCTATGACTG
GGATAAACAAGAAGATACATACAGTCAATATCCTGACACAGCGCACAGTGATTGCTACAAAAATAAATATTCCACCCACC
AAACCGGCATATTTTTCCGTACTATCCGCACCAACTATTTTTATAATATAGGTATAGAAGTTGAGGCACAAAAAACGACA
AATAAAAGCTATATGCGGGACACGACCTTTGAGTATTTATCCAGAAATGCAATAAACTACTCCCCCACCATAAACTTTAA
GTATACCTTCTCTAAACAAACAACCTTAAAAATAAACTATCGTGGGAGAACGGCACAACCCGGTATGACCGACTTATATA
GAAAAAAAGATATTTCTGATCCTTTAAACATACGGCTAGCTAACCCCGAACTTAAACCATCATTCAATAACAACATATCA
GCTACATTTAATACTTACTTTACTGAAACATCCCGTAGTTTGAATGCTAACCTCTCCTATAATAATACAATGAATAGTAC
AACACGTATTGTCACATATGACGAAAATACCGGAGGACAGACTACCCAACCGACTAATGTGAACGGGAACTGGCGAATAA
ACGGTTCGCTTACCTTCAGTACTCCATTATCCAACAAAAAATTCACAGTAAATACACACACCAATACAAATTACGGCAAC
TCTGTCGGTTTCACTGTGCTCAACAAAGAGTCAGATGCAGTTAAAAGTAATACGACTAACCTCTTTTTATCAGAACGCTT
AAAAGGGAGCTACCGTAGCGATCTGATTGACTTTGAGTTATCTGCAGAAGTCAGATATCGAAAATCAGAACATTCTATCA
AAAAAGAGAACCGACGGGAAACATTTGATTATACATTCGGAACTGAAGCAAACTTAAACTTACCTTGGGATATAAAAATC
TCATCCAATATCAATTGTAGATTAAAAAGAGGATATGGCGGTAAAAATGATACTAACCGCACCCTATGGAACGCACAAAT
ATCGAAAAGCTTCCTCAAGAAGAAAAAGGCAACCGTCCGATTTCACCTATATGATATACTTCGTGAGAATGAAAGTTCGG
AACGTTCCATTTCCGAGAATTCTATCACCGACAGAGAATCCAGTACTTCTAACGTATATTTTATGGCATATATTGCGTAT
CGGTTCAATACCTTCGGACAAAAAAGAAAACGACAATCGGTACAAAACTAA

Upstream 100 bases:

>100_bases
TGAACTTTATTTATCATTTTATGAACTCTTTTTACAGAAAAAATCAAGATATTTGCAAGAAATACCATAAACACTAAAAC
ACCTCATAACGGGAGACCTT

Downstream 100 bases:

>100_bases
AATTATAAAAGAGAAGGAAATGATGTATCCACAACTACATCATTTCCTTTTTGTTCTTTAAACACGCTGAGTAACATTGA
AAAAAGTCATATTGCAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 896; Mature: 896

Protein sequence:

>896_residues
MNKTTFILLITLIISYINTAYIQAQTQRVTVQGSILEKDTQFPVEQATIQLLSLPDSNYVKGISSLEQGKFSLTTLPGRF
LLKISFIGLATEYKPLQINTTQTIVQLGKIELKPDAVLLNETVIVAQAPPVVVTGDTTAYNTSAYRVSEGAALEELVKKL
PGAEINEEGKLIINGQEVKKIMMNGEEFFLNDPNTVLKELPADMIDQLKTYQKKSDMARITGVDDGKEEMVLDLRVKPSM
RKGWNGNFEAGYGNDDHYRAKGMANRFKNKMNLSINGTANDNGINSNQRIGANYSQNTQKLKYGGSIEVRENKRDSWSKR
HTESFLSDNTSQFSLQNNQSDGKTSAISANFRFEWKLDSLTTIMYRPTFNFSKGNSNSGNFSETLNNESTPINRKEATNH
QTNDRFSTNGSLQLNRKLNSKGRNIALRLYYDLDDGNSDRYSLSNTYYLKYGDSIKTLNQWIEKLDKNNKYQVQITYMEP
VFTNRFIEINYSYQHRSSLSEKYAYDWDKQEDTYSQYPDTAHSDCYKNKYSTHQTGIFFRTIRTNYFYNIGIEVEAQKTT
NKSYMRDTTFEYLSRNAINYSPTINFKYTFSKQTTLKINYRGRTAQPGMTDLYRKKDISDPLNIRLANPELKPSFNNNIS
ATFNTYFTETSRSLNANLSYNNTMNSTTRIVTYDENTGGQTTQPTNVNGNWRINGSLTFSTPLSNKKFTVNTHTNTNYGN
SVGFTVLNKESDAVKSNTTNLFLSERLKGSYRSDLIDFELSAEVRYRKSEHSIKKENRRETFDYTFGTEANLNLPWDIKI
SSNINCRLKRGYGGKNDTNRTLWNAQISKSFLKKKKATVRFHLYDILRENESSERSISENSITDRESSTSNVYFMAYIAY
RFNTFGQKRKRQSVQN

Sequences:

>Translated_896_residues
MNKTTFILLITLIISYINTAYIQAQTQRVTVQGSILEKDTQFPVEQATIQLLSLPDSNYVKGISSLEQGKFSLTTLPGRF
LLKISFIGLATEYKPLQINTTQTIVQLGKIELKPDAVLLNETVIVAQAPPVVVTGDTTAYNTSAYRVSEGAALEELVKKL
PGAEINEEGKLIINGQEVKKIMMNGEEFFLNDPNTVLKELPADMIDQLKTYQKKSDMARITGVDDGKEEMVLDLRVKPSM
RKGWNGNFEAGYGNDDHYRAKGMANRFKNKMNLSINGTANDNGINSNQRIGANYSQNTQKLKYGGSIEVRENKRDSWSKR
HTESFLSDNTSQFSLQNNQSDGKTSAISANFRFEWKLDSLTTIMYRPTFNFSKGNSNSGNFSETLNNESTPINRKEATNH
QTNDRFSTNGSLQLNRKLNSKGRNIALRLYYDLDDGNSDRYSLSNTYYLKYGDSIKTLNQWIEKLDKNNKYQVQITYMEP
VFTNRFIEINYSYQHRSSLSEKYAYDWDKQEDTYSQYPDTAHSDCYKNKYSTHQTGIFFRTIRTNYFYNIGIEVEAQKTT
NKSYMRDTTFEYLSRNAINYSPTINFKYTFSKQTTLKINYRGRTAQPGMTDLYRKKDISDPLNIRLANPELKPSFNNNIS
ATFNTYFTETSRSLNANLSYNNTMNSTTRIVTYDENTGGQTTQPTNVNGNWRINGSLTFSTPLSNKKFTVNTHTNTNYGN
SVGFTVLNKESDAVKSNTTNLFLSERLKGSYRSDLIDFELSAEVRYRKSEHSIKKENRRETFDYTFGTEANLNLPWDIKI
SSNINCRLKRGYGGKNDTNRTLWNAQISKSFLKKKKATVRFHLYDILRENESSERSISENSITDRESSTSNVYFMAYIAY
RFNTFGQKRKRQSVQN
>Mature_896_residues
MNKTTFILLITLIISYINTAYIQAQTQRVTVQGSILEKDTQFPVEQATIQLLSLPDSNYVKGISSLEQGKFSLTTLPGRF
LLKISFIGLATEYKPLQINTTQTIVQLGKIELKPDAVLLNETVIVAQAPPVVVTGDTTAYNTSAYRVSEGAALEELVKKL
PGAEINEEGKLIINGQEVKKIMMNGEEFFLNDPNTVLKELPADMIDQLKTYQKKSDMARITGVDDGKEEMVLDLRVKPSM
RKGWNGNFEAGYGNDDHYRAKGMANRFKNKMNLSINGTANDNGINSNQRIGANYSQNTQKLKYGGSIEVRENKRDSWSKR
HTESFLSDNTSQFSLQNNQSDGKTSAISANFRFEWKLDSLTTIMYRPTFNFSKGNSNSGNFSETLNNESTPINRKEATNH
QTNDRFSTNGSLQLNRKLNSKGRNIALRLYYDLDDGNSDRYSLSNTYYLKYGDSIKTLNQWIEKLDKNNKYQVQITYMEP
VFTNRFIEINYSYQHRSSLSEKYAYDWDKQEDTYSQYPDTAHSDCYKNKYSTHQTGIFFRTIRTNYFYNIGIEVEAQKTT
NKSYMRDTTFEYLSRNAINYSPTINFKYTFSKQTTLKINYRGRTAQPGMTDLYRKKDISDPLNIRLANPELKPSFNNNIS
ATFNTYFTETSRSLNANLSYNNTMNSTTRIVTYDENTGGQTTQPTNVNGNWRINGSLTFSTPLSNKKFTVNTHTNTNYGN
SVGFTVLNKESDAVKSNTTNLFLSERLKGSYRSDLIDFELSAEVRYRKSEHSIKKENRRETFDYTFGTEANLNLPWDIKI
SSNINCRLKRGYGGKNDTNRTLWNAQISKSFLKKKKATVRFHLYDILRENESSERSISENSITDRESSTSNVYFMAYIAY
RFNTFGQKRKRQSVQN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 102714; Mature: 102714

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTTFILLITLIISYINTAYIQAQTQRVTVQGSILEKDTQFPVEQATIQLLSLPDSNYV
CCCCHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEEECCCCCCCHHHEEEEEEECCCCHHH
KGISSLEQGKFSLTTLPGRFLLKISFIGLATEYKPLQINTTQTIVQLGKIELKPDAVLLN
HHHHHHHCCCEEEEECCCEEEEEEEEEEEECCCCCEEECHHHHHHHHCCEEECCCEEEEE
ETVIVAQAPPVVVTGDTTAYNTSAYRVSEGAALEELVKKLPGAEINEEGKLIINGQEVKK
CEEEEEECCCEEEECCCCEECCCEEEECCCCHHHHHHHHCCCCCCCCCCCEEECHHHHHH
IMMNGEEFFLNDPNTVLKELPADMIDQLKTYQKKSDMARITGVDDGKEEMVLDLRVKPSM
HHHCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCH
RKGWNGNFEAGYGNDDHYRAKGMANRFKNKMNLSINGTANDNGINSNQRIGANYSQNTQK
HCCCCCCCCCCCCCCCCEEHHHHHHHCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCCE
LKYGGSIEVRENKRDSWSKRHTESFLSDNTSQFSLQNNQSDGKTSAISANFRFEWKLDSL
EECCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECEEEEEEECCE
TTIMYRPTFNFSKGNSNSGNFSETLNNESTPINRKEATNHQTNDRFSTNGSLQLNRKLNS
EEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEEECCC
KGRNIALRLYYDLDDGNSDRYSLSNTYYLKYGDSIKTLNQWIEKLDKNNKYQVQITYMEP
CCCEEEEEEEEEECCCCCCCEEECEEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEEECC
VFTNRFIEINYSYQHRSSLSEKYAYDWDKQEDTYSQYPDTAHSDCYKNKYSTHQTGIFFR
CCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCCCCEEEE
TIRTNYFYNIGIEVEAQKTTNKSYMRDTTFEYLSRNAINYSPTINFKYTFSKQTTLKINY
EEECCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEEE
RGRTAQPGMTDLYRKKDISDPLNIRLANPELKPSFNNNISATFNTYFTETSRSLNANLSY
CCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEEECCCCEECEEEE
NNTMNSTTRIVTYDENTGGQTTQPTNVNGNWRINGSLTFSTPLSNKKFTVNTHTNTNYGN
CCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCC
SVGFTVLNKESDAVKSNTTNLFLSERLKGSYRSDLIDFELSAEVRYRKSEHSIKKENRRE
CEEEEEECCCCCCHHCCCCEEEEEHHHCCCHHCCEEEEEECCEEEECCHHHHHHHHCCCC
TFDYTFGTEANLNLPWDIKISSNINCRLKRGYGGKNDTNRTLWNAQISKSFLKKKKATVR
EEEEECCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHCCEEE
FHLYDILRENESSERSISENSITDRESSTSNVYFMAYIAYRFNTFGQKRKRQSVQN
EEEEHHHHCCCCCHHCCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKTTFILLITLIISYINTAYIQAQTQRVTVQGSILEKDTQFPVEQATIQLLSLPDSNYV
CCCCHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEEECCCCCCCHHHEEEEEEECCCCHHH
KGISSLEQGKFSLTTLPGRFLLKISFIGLATEYKPLQINTTQTIVQLGKIELKPDAVLLN
HHHHHHHCCCEEEEECCCEEEEEEEEEEEECCCCCEEECHHHHHHHHCCEEECCCEEEEE
ETVIVAQAPPVVVTGDTTAYNTSAYRVSEGAALEELVKKLPGAEINEEGKLIINGQEVKK
CEEEEEECCCEEEECCCCEECCCEEEECCCCHHHHHHHHCCCCCCCCCCCEEECHHHHHH
IMMNGEEFFLNDPNTVLKELPADMIDQLKTYQKKSDMARITGVDDGKEEMVLDLRVKPSM
HHHCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCH
RKGWNGNFEAGYGNDDHYRAKGMANRFKNKMNLSINGTANDNGINSNQRIGANYSQNTQK
HCCCCCCCCCCCCCCCCEEHHHHHHHCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCCE
LKYGGSIEVRENKRDSWSKRHTESFLSDNTSQFSLQNNQSDGKTSAISANFRFEWKLDSL
EECCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECEEEEEEECCE
TTIMYRPTFNFSKGNSNSGNFSETLNNESTPINRKEATNHQTNDRFSTNGSLQLNRKLNS
EEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEEECCC
KGRNIALRLYYDLDDGNSDRYSLSNTYYLKYGDSIKTLNQWIEKLDKNNKYQVQITYMEP
CCCEEEEEEEEEECCCCCCCEEECEEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEEECC
VFTNRFIEINYSYQHRSSLSEKYAYDWDKQEDTYSQYPDTAHSDCYKNKYSTHQTGIFFR
CCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCCCCEEEE
TIRTNYFYNIGIEVEAQKTTNKSYMRDTTFEYLSRNAINYSPTINFKYTFSKQTTLKINY
EEECCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEEE
RGRTAQPGMTDLYRKKDISDPLNIRLANPELKPSFNNNISATFNTYFTETSRSLNANLSY
CCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEEECCCCEECEEEE
NNTMNSTTRIVTYDENTGGQTTQPTNVNGNWRINGSLTFSTPLSNKKFTVNTHTNTNYGN
CCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCC
SVGFTVLNKESDAVKSNTTNLFLSERLKGSYRSDLIDFELSAEVRYRKSEHSIKKENRRE
CEEEEEECCCCCCHHCCCCEEEEEHHHCCCHHCCEEEEEECCEEEECCHHHHHHHHCCCC
TFDYTFGTEANLNLPWDIKISSNINCRLKRGYGGKNDTNRTLWNAQISKSFLKKKKATVR
EEEEECCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHCCEEE
FHLYDILRENESSERSISENSITDRESSTSNVYFMAYIAYRFNTFGQKRKRQSVQN
EEEEHHHHCCCCCHHCCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA