| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345699
Identifier: 29345699
GI number: 29345699
Start: 334208
End: 336898
Strand: Reverse
Name: 29345699
Synonym: BT_0289
Alternate gene names: NA
Gene position: 336898-334208 (Counterclockwise)
Preceding gene: 29345713
Following gene: 29345691
Centisome position: 5.38
GC content: 38.13
Gene sequence:
>2691_bases ATGAATAAAACGACTTTTATACTACTAATAACATTAATTATATCATACATAAATACTGCTTATATTCAAGCACAGACTCA ACGTGTCACAGTACAGGGGAGTATTCTGGAAAAAGACACACAGTTCCCTGTTGAGCAAGCTACCATACAACTGTTATCCT TGCCCGACAGTAATTATGTAAAAGGCATTTCCAGCTTGGAACAGGGAAAATTTTCACTCACAACTCTCCCGGGACGTTTT TTGCTAAAAATTTCTTTCATAGGCCTCGCTACCGAATATAAGCCCCTGCAAATAAACACAACCCAGACTATTGTTCAACT AGGCAAAATAGAGTTGAAACCTGATGCTGTACTTCTTAACGAAACCGTCATTGTAGCCCAAGCCCCGCCTGTTGTCGTCA CAGGTGATACAACCGCATATAATACTTCCGCTTACCGCGTCAGTGAAGGTGCTGCATTGGAAGAACTAGTCAAAAAGCTA CCCGGAGCCGAAATAAACGAAGAAGGGAAATTAATCATTAATGGTCAGGAAGTCAAAAAAATCATGATGAACGGAGAAGA ATTCTTCCTTAACGACCCCAATACGGTTTTAAAAGAACTGCCAGCCGATATGATAGATCAACTAAAAACTTACCAAAAGA AATCAGACATGGCACGTATTACCGGAGTAGATGACGGTAAAGAAGAAATGGTACTCGACTTACGCGTAAAACCAAGTATG AGAAAAGGATGGAATGGTAACTTTGAAGCAGGATATGGAAATGACGACCATTATAGGGCAAAAGGAATGGCCAATCGTTT CAAAAACAAAATGAACTTATCAATCAATGGTACCGCCAACGACAATGGAATTAATTCCAATCAAAGAATAGGTGCCAACT ATTCTCAGAATACTCAGAAACTCAAATATGGAGGTAGTATTGAAGTCCGGGAAAATAAACGCGATTCATGGAGCAAGCGT CATACAGAATCTTTTTTGTCAGACAACACTTCTCAGTTTTCCCTGCAGAACAACCAATCCGATGGAAAGACAAGTGCTAT TTCCGCTAATTTTCGTTTCGAATGGAAATTAGACAGCCTCACCACTATTATGTATCGACCGACATTTAATTTTTCCAAAG GAAACTCCAATTCAGGCAACTTCTCAGAAACGCTCAACAACGAGTCAACTCCTATCAACCGGAAAGAAGCCACAAACCAC CAAACGAATGACAGATTCTCCACCAATGGCTCTTTGCAGTTGAACCGCAAATTAAACAGCAAAGGAAGAAACATCGCCTT ACGTCTTTATTACGATCTGGATGACGGCAATTCCGATCGGTATAGTCTTTCGAATACTTATTACTTGAAGTATGGTGATA GTATAAAAACTTTGAACCAATGGATTGAAAAACTTGACAAAAACAATAAATATCAAGTTCAGATAACATATATGGAACCT GTATTTACCAATCGGTTTATCGAAATTAATTATAGCTATCAACACCGTTCCTCACTCTCTGAAAAATATGCCTATGACTG GGATAAACAAGAAGATACATACAGTCAATATCCTGACACAGCGCACAGTGATTGCTACAAAAATAAATATTCCACCCACC AAACCGGCATATTTTTCCGTACTATCCGCACCAACTATTTTTATAATATAGGTATAGAAGTTGAGGCACAAAAAACGACA AATAAAAGCTATATGCGGGACACGACCTTTGAGTATTTATCCAGAAATGCAATAAACTACTCCCCCACCATAAACTTTAA GTATACCTTCTCTAAACAAACAACCTTAAAAATAAACTATCGTGGGAGAACGGCACAACCCGGTATGACCGACTTATATA GAAAAAAAGATATTTCTGATCCTTTAAACATACGGCTAGCTAACCCCGAACTTAAACCATCATTCAATAACAACATATCA GCTACATTTAATACTTACTTTACTGAAACATCCCGTAGTTTGAATGCTAACCTCTCCTATAATAATACAATGAATAGTAC AACACGTATTGTCACATATGACGAAAATACCGGAGGACAGACTACCCAACCGACTAATGTGAACGGGAACTGGCGAATAA ACGGTTCGCTTACCTTCAGTACTCCATTATCCAACAAAAAATTCACAGTAAATACACACACCAATACAAATTACGGCAAC TCTGTCGGTTTCACTGTGCTCAACAAAGAGTCAGATGCAGTTAAAAGTAATACGACTAACCTCTTTTTATCAGAACGCTT AAAAGGGAGCTACCGTAGCGATCTGATTGACTTTGAGTTATCTGCAGAAGTCAGATATCGAAAATCAGAACATTCTATCA AAAAAGAGAACCGACGGGAAACATTTGATTATACATTCGGAACTGAAGCAAACTTAAACTTACCTTGGGATATAAAAATC TCATCCAATATCAATTGTAGATTAAAAAGAGGATATGGCGGTAAAAATGATACTAACCGCACCCTATGGAACGCACAAAT ATCGAAAAGCTTCCTCAAGAAGAAAAAGGCAACCGTCCGATTTCACCTATATGATATACTTCGTGAGAATGAAAGTTCGG AACGTTCCATTTCCGAGAATTCTATCACCGACAGAGAATCCAGTACTTCTAACGTATATTTTATGGCATATATTGCGTAT CGGTTCAATACCTTCGGACAAAAAAGAAAACGACAATCGGTACAAAACTAA
Upstream 100 bases:
>100_bases TGAACTTTATTTATCATTTTATGAACTCTTTTTACAGAAAAAATCAAGATATTTGCAAGAAATACCATAAACACTAAAAC ACCTCATAACGGGAGACCTT
Downstream 100 bases:
>100_bases AATTATAAAAGAGAAGGAAATGATGTATCCACAACTACATCATTTCCTTTTTGTTCTTTAAACACGCTGAGTAACATTGA AAAAAGTCATATTGCAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 896; Mature: 896
Protein sequence:
>896_residues MNKTTFILLITLIISYINTAYIQAQTQRVTVQGSILEKDTQFPVEQATIQLLSLPDSNYVKGISSLEQGKFSLTTLPGRF LLKISFIGLATEYKPLQINTTQTIVQLGKIELKPDAVLLNETVIVAQAPPVVVTGDTTAYNTSAYRVSEGAALEELVKKL PGAEINEEGKLIINGQEVKKIMMNGEEFFLNDPNTVLKELPADMIDQLKTYQKKSDMARITGVDDGKEEMVLDLRVKPSM RKGWNGNFEAGYGNDDHYRAKGMANRFKNKMNLSINGTANDNGINSNQRIGANYSQNTQKLKYGGSIEVRENKRDSWSKR HTESFLSDNTSQFSLQNNQSDGKTSAISANFRFEWKLDSLTTIMYRPTFNFSKGNSNSGNFSETLNNESTPINRKEATNH QTNDRFSTNGSLQLNRKLNSKGRNIALRLYYDLDDGNSDRYSLSNTYYLKYGDSIKTLNQWIEKLDKNNKYQVQITYMEP VFTNRFIEINYSYQHRSSLSEKYAYDWDKQEDTYSQYPDTAHSDCYKNKYSTHQTGIFFRTIRTNYFYNIGIEVEAQKTT NKSYMRDTTFEYLSRNAINYSPTINFKYTFSKQTTLKINYRGRTAQPGMTDLYRKKDISDPLNIRLANPELKPSFNNNIS ATFNTYFTETSRSLNANLSYNNTMNSTTRIVTYDENTGGQTTQPTNVNGNWRINGSLTFSTPLSNKKFTVNTHTNTNYGN SVGFTVLNKESDAVKSNTTNLFLSERLKGSYRSDLIDFELSAEVRYRKSEHSIKKENRRETFDYTFGTEANLNLPWDIKI SSNINCRLKRGYGGKNDTNRTLWNAQISKSFLKKKKATVRFHLYDILRENESSERSISENSITDRESSTSNVYFMAYIAY RFNTFGQKRKRQSVQN
Sequences:
>Translated_896_residues MNKTTFILLITLIISYINTAYIQAQTQRVTVQGSILEKDTQFPVEQATIQLLSLPDSNYVKGISSLEQGKFSLTTLPGRF LLKISFIGLATEYKPLQINTTQTIVQLGKIELKPDAVLLNETVIVAQAPPVVVTGDTTAYNTSAYRVSEGAALEELVKKL PGAEINEEGKLIINGQEVKKIMMNGEEFFLNDPNTVLKELPADMIDQLKTYQKKSDMARITGVDDGKEEMVLDLRVKPSM RKGWNGNFEAGYGNDDHYRAKGMANRFKNKMNLSINGTANDNGINSNQRIGANYSQNTQKLKYGGSIEVRENKRDSWSKR HTESFLSDNTSQFSLQNNQSDGKTSAISANFRFEWKLDSLTTIMYRPTFNFSKGNSNSGNFSETLNNESTPINRKEATNH QTNDRFSTNGSLQLNRKLNSKGRNIALRLYYDLDDGNSDRYSLSNTYYLKYGDSIKTLNQWIEKLDKNNKYQVQITYMEP VFTNRFIEINYSYQHRSSLSEKYAYDWDKQEDTYSQYPDTAHSDCYKNKYSTHQTGIFFRTIRTNYFYNIGIEVEAQKTT NKSYMRDTTFEYLSRNAINYSPTINFKYTFSKQTTLKINYRGRTAQPGMTDLYRKKDISDPLNIRLANPELKPSFNNNIS ATFNTYFTETSRSLNANLSYNNTMNSTTRIVTYDENTGGQTTQPTNVNGNWRINGSLTFSTPLSNKKFTVNTHTNTNYGN SVGFTVLNKESDAVKSNTTNLFLSERLKGSYRSDLIDFELSAEVRYRKSEHSIKKENRRETFDYTFGTEANLNLPWDIKI SSNINCRLKRGYGGKNDTNRTLWNAQISKSFLKKKKATVRFHLYDILRENESSERSISENSITDRESSTSNVYFMAYIAY RFNTFGQKRKRQSVQN >Mature_896_residues MNKTTFILLITLIISYINTAYIQAQTQRVTVQGSILEKDTQFPVEQATIQLLSLPDSNYVKGISSLEQGKFSLTTLPGRF LLKISFIGLATEYKPLQINTTQTIVQLGKIELKPDAVLLNETVIVAQAPPVVVTGDTTAYNTSAYRVSEGAALEELVKKL PGAEINEEGKLIINGQEVKKIMMNGEEFFLNDPNTVLKELPADMIDQLKTYQKKSDMARITGVDDGKEEMVLDLRVKPSM RKGWNGNFEAGYGNDDHYRAKGMANRFKNKMNLSINGTANDNGINSNQRIGANYSQNTQKLKYGGSIEVRENKRDSWSKR HTESFLSDNTSQFSLQNNQSDGKTSAISANFRFEWKLDSLTTIMYRPTFNFSKGNSNSGNFSETLNNESTPINRKEATNH QTNDRFSTNGSLQLNRKLNSKGRNIALRLYYDLDDGNSDRYSLSNTYYLKYGDSIKTLNQWIEKLDKNNKYQVQITYMEP VFTNRFIEINYSYQHRSSLSEKYAYDWDKQEDTYSQYPDTAHSDCYKNKYSTHQTGIFFRTIRTNYFYNIGIEVEAQKTT NKSYMRDTTFEYLSRNAINYSPTINFKYTFSKQTTLKINYRGRTAQPGMTDLYRKKDISDPLNIRLANPELKPSFNNNIS ATFNTYFTETSRSLNANLSYNNTMNSTTRIVTYDENTGGQTTQPTNVNGNWRINGSLTFSTPLSNKKFTVNTHTNTNYGN SVGFTVLNKESDAVKSNTTNLFLSERLKGSYRSDLIDFELSAEVRYRKSEHSIKKENRRETFDYTFGTEANLNLPWDIKI SSNINCRLKRGYGGKNDTNRTLWNAQISKSFLKKKKATVRFHLYDILRENESSERSISENSITDRESSTSNVYFMAYIAY RFNTFGQKRKRQSVQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102714; Mature: 102714
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTTFILLITLIISYINTAYIQAQTQRVTVQGSILEKDTQFPVEQATIQLLSLPDSNYV CCCCHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEEECCCCCCCHHHEEEEEEECCCCHHH KGISSLEQGKFSLTTLPGRFLLKISFIGLATEYKPLQINTTQTIVQLGKIELKPDAVLLN HHHHHHHCCCEEEEECCCEEEEEEEEEEEECCCCCEEECHHHHHHHHCCEEECCCEEEEE ETVIVAQAPPVVVTGDTTAYNTSAYRVSEGAALEELVKKLPGAEINEEGKLIINGQEVKK CEEEEEECCCEEEECCCCEECCCEEEECCCCHHHHHHHHCCCCCCCCCCCEEECHHHHHH IMMNGEEFFLNDPNTVLKELPADMIDQLKTYQKKSDMARITGVDDGKEEMVLDLRVKPSM HHHCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCH RKGWNGNFEAGYGNDDHYRAKGMANRFKNKMNLSINGTANDNGINSNQRIGANYSQNTQK HCCCCCCCCCCCCCCCCEEHHHHHHHCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCCE LKYGGSIEVRENKRDSWSKRHTESFLSDNTSQFSLQNNQSDGKTSAISANFRFEWKLDSL EECCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECEEEEEEECCE TTIMYRPTFNFSKGNSNSGNFSETLNNESTPINRKEATNHQTNDRFSTNGSLQLNRKLNS EEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEEECCC KGRNIALRLYYDLDDGNSDRYSLSNTYYLKYGDSIKTLNQWIEKLDKNNKYQVQITYMEP CCCEEEEEEEEEECCCCCCCEEECEEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEEECC VFTNRFIEINYSYQHRSSLSEKYAYDWDKQEDTYSQYPDTAHSDCYKNKYSTHQTGIFFR CCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCCCCEEEE TIRTNYFYNIGIEVEAQKTTNKSYMRDTTFEYLSRNAINYSPTINFKYTFSKQTTLKINY EEECCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEEE RGRTAQPGMTDLYRKKDISDPLNIRLANPELKPSFNNNISATFNTYFTETSRSLNANLSY CCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEEECCCCEECEEEE NNTMNSTTRIVTYDENTGGQTTQPTNVNGNWRINGSLTFSTPLSNKKFTVNTHTNTNYGN CCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCC SVGFTVLNKESDAVKSNTTNLFLSERLKGSYRSDLIDFELSAEVRYRKSEHSIKKENRRE CEEEEEECCCCCCHHCCCCEEEEEHHHCCCHHCCEEEEEECCEEEECCHHHHHHHHCCCC TFDYTFGTEANLNLPWDIKISSNINCRLKRGYGGKNDTNRTLWNAQISKSFLKKKKATVR EEEEECCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHCCEEE FHLYDILRENESSERSISENSITDRESSTSNVYFMAYIAYRFNTFGQKRKRQSVQN EEEEHHHHCCCCCHHCCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKTTFILLITLIISYINTAYIQAQTQRVTVQGSILEKDTQFPVEQATIQLLSLPDSNYV CCCCHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEEECCCCCCCHHHEEEEEEECCCCHHH KGISSLEQGKFSLTTLPGRFLLKISFIGLATEYKPLQINTTQTIVQLGKIELKPDAVLLN HHHHHHHCCCEEEEECCCEEEEEEEEEEEECCCCCEEECHHHHHHHHCCEEECCCEEEEE ETVIVAQAPPVVVTGDTTAYNTSAYRVSEGAALEELVKKLPGAEINEEGKLIINGQEVKK CEEEEEECCCEEEECCCCEECCCEEEECCCCHHHHHHHHCCCCCCCCCCCEEECHHHHHH IMMNGEEFFLNDPNTVLKELPADMIDQLKTYQKKSDMARITGVDDGKEEMVLDLRVKPSM HHHCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCH RKGWNGNFEAGYGNDDHYRAKGMANRFKNKMNLSINGTANDNGINSNQRIGANYSQNTQK HCCCCCCCCCCCCCCCCEEHHHHHHHCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCCE LKYGGSIEVRENKRDSWSKRHTESFLSDNTSQFSLQNNQSDGKTSAISANFRFEWKLDSL EECCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECEEEEEEECCE TTIMYRPTFNFSKGNSNSGNFSETLNNESTPINRKEATNHQTNDRFSTNGSLQLNRKLNS EEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEEECCC KGRNIALRLYYDLDDGNSDRYSLSNTYYLKYGDSIKTLNQWIEKLDKNNKYQVQITYMEP CCCEEEEEEEEEECCCCCCCEEECEEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEEECC VFTNRFIEINYSYQHRSSLSEKYAYDWDKQEDTYSQYPDTAHSDCYKNKYSTHQTGIFFR CCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCCCCEEEE TIRTNYFYNIGIEVEAQKTTNKSYMRDTTFEYLSRNAINYSPTINFKYTFSKQTTLKINY EEECCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEEE RGRTAQPGMTDLYRKKDISDPLNIRLANPELKPSFNNNISATFNTYFTETSRSLNANLSY CCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEEEECCCCEECEEEE NNTMNSTTRIVTYDENTGGQTTQPTNVNGNWRINGSLTFSTPLSNKKFTVNTHTNTNYGN CCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCC SVGFTVLNKESDAVKSNTTNLFLSERLKGSYRSDLIDFELSAEVRYRKSEHSIKKENRRE CEEEEEECCCCCCHHCCCCEEEEEHHHCCCHHCCEEEEEECCEEEECCHHHHHHHHCCCC TFDYTFGTEANLNLPWDIKISSNINCRLKRGYGGKNDTNRTLWNAQISKSFLKKKKATVR EEEEECCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHCCEEE FHLYDILRENESSERSISENSITDRESSTSNVYFMAYIAYRFNTFGQKRKRQSVQN EEEEHHHHCCCCCHHCCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA