Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345676

Identifier: 29345676

GI number: 29345676

Start: 298121

End: 299581

Strand: Reverse

Name: 29345676

Synonym: BT_0266

Alternate gene names: NA

Gene position: 299581-298121 (Counterclockwise)

Preceding gene: 29345691

Following gene: 29345675

Centisome position: 4.79

GC content: 37.17

Gene sequence:

>1461_bases
ATGAAAAAAAAATATGTGAAGATTATGTTTTTATCATTGACATTGCTGACAATTAGCACAACAGCTACTTATGCAGTTCA
ACCCAAAGATGATAAAAAAGAAAATGAAGCCTTACAAACCTCAACAGAGGAACATCTACCATTACTAACGATTAATGGTA
CAAACGCATCATCATCCTTCATTGTCAATTCCGAGGCTTTACTCGGCAAAGAAATAACAATTACAGCTCCAAACGGTTTC
ACCGTAACTCCGACTGTTATAGCAGCCAACTCTGGAAAACAAAAAGTGAAAGTGACCTTAAACAGTACTAAAAGACTGAC
TGAAGGGAAAATTATTCTGCGAAGTGGAGACGTCCGTTCATATTTAAAAGTAAAAGGATATGGAACCGCTCTTCCTGTGA
AAGACATTGCAGCATCTCCTGCTTACAAGAAAGGAAATGATAAGGAATTTACCAAAGCATTCACTCCAAATTCAAAAGGA
TATACTATCGAATTCAAAATAAAAACAGATGACTCGGAGAAAAGCTTTTATCCTTATTTTGTAAACGAAAAAGGTTATGG
ATTCAAAGCATATATTACCTCTAATGAAATCGGATTATTCAATGCCTACAAAAAAGAAATTACCAATCCTGCAACAAATG
GAAAAGCAGGAGGAAAAGGTAAGTTCTATAATAATGATGGACAAGCACATATTTATCGTTTTGCCATAACACCAGATAAC
CGTGCCTTCATTTACAGAGATGGAATTCCTGTAGATTCCGTTAGAATTATAGACTACGCTCCCCAGCCAAACTTTGCAGA
GAAAGTTGGCAAACCAGTAGAAAATCTTTTAAAGAACCCAAACTTCGAAGGAGAATTTGATATAAATCCAGAAACGAAGT
TAGTTAGTAGAGTGGAAGGATGGGATGTTGTTATTAGCGACCGTTGGAATTCAGAACAACAAATTCTTCCTGAAGAAATT
GATAATAATCAGGACCTGGACAATCATGTTTTTGAAATTAGACCCTATAAATGGGCAGCTGGCTGGAGTGATGGTATCCT
AATGCAAGTGGTAGATGTTGTACCGAATGAAAATTACACACTATCTGCTCTATTAAAAGGAGGAATAGCAAAAAAAGAAG
GAAAACTCACCGGTAAAATGATTATAGAAGAAGTGCAAGACCCTGAAAAAAAAGTCATAACAGAAATTGCCAGTGACAAC
TGGGAAACTTATTCAATGGACTATACTACTTCTGCCGAATGTAACCAAATTCGCGTATCCTTTACAGTAGGACGTGGAGG
ATGGGGAAATGATATCGGAGCTGTCCGTGTAGACAACGCTAAACTGACCGGCACATCACGTACATACTCGCCCAAATTCG
GTTTTATAGATAATACTGCTGATGTGGAATATTTCACAATTGACGAATCTGGAGCCTATGCCCCTGCACAGCCCGAAATA
ACTATTAATATTGAAGACTAA

Upstream 100 bases:

>100_bases
TATTTCGAATCAATTTTGGTTATACTATTCAGTAAGCAAGAAATAAACACAGATTATTAGTTCAATCATAAATAATTAAT
TTATAAAACATTTCTGTATC

Downstream 100 bases:

>100_bases
AATAACGAAAACATGAGAATAACTCTATTTATCTGCTTTATGTTCTCATTCACCTCTATTTTTTCACAAAACACCCAGAT
CAGTCCGGGTGTTTTGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MKKKYVKIMFLSLTLLTISTTATYAVQPKDDKKENEALQTSTEEHLPLLTINGTNASSSFIVNSEALLGKEITITAPNGF
TVTPTVIAANSGKQKVKVTLNSTKRLTEGKIILRSGDVRSYLKVKGYGTALPVKDIAASPAYKKGNDKEFTKAFTPNSKG
YTIEFKIKTDDSEKSFYPYFVNEKGYGFKAYITSNEIGLFNAYKKEITNPATNGKAGGKGKFYNNDGQAHIYRFAITPDN
RAFIYRDGIPVDSVRIIDYAPQPNFAEKVGKPVENLLKNPNFEGEFDINPETKLVSRVEGWDVVISDRWNSEQQILPEEI
DNNQDLDNHVFEIRPYKWAAGWSDGILMQVVDVVPNENYTLSALLKGGIAKKEGKLTGKMIIEEVQDPEKKVITEIASDN
WETYSMDYTTSAECNQIRVSFTVGRGGWGNDIGAVRVDNAKLTGTSRTYSPKFGFIDNTADVEYFTIDESGAYAPAQPEI
TINIED

Sequences:

>Translated_486_residues
MKKKYVKIMFLSLTLLTISTTATYAVQPKDDKKENEALQTSTEEHLPLLTINGTNASSSFIVNSEALLGKEITITAPNGF
TVTPTVIAANSGKQKVKVTLNSTKRLTEGKIILRSGDVRSYLKVKGYGTALPVKDIAASPAYKKGNDKEFTKAFTPNSKG
YTIEFKIKTDDSEKSFYPYFVNEKGYGFKAYITSNEIGLFNAYKKEITNPATNGKAGGKGKFYNNDGQAHIYRFAITPDN
RAFIYRDGIPVDSVRIIDYAPQPNFAEKVGKPVENLLKNPNFEGEFDINPETKLVSRVEGWDVVISDRWNSEQQILPEEI
DNNQDLDNHVFEIRPYKWAAGWSDGILMQVVDVVPNENYTLSALLKGGIAKKEGKLTGKMIIEEVQDPEKKVITEIASDN
WETYSMDYTTSAECNQIRVSFTVGRGGWGNDIGAVRVDNAKLTGTSRTYSPKFGFIDNTADVEYFTIDESGAYAPAQPEI
TINIED
>Mature_486_residues
MKKKYVKIMFLSLTLLTISTTATYAVQPKDDKKENEALQTSTEEHLPLLTINGTNASSSFIVNSEALLGKEITITAPNGF
TVTPTVIAANSGKQKVKVTLNSTKRLTEGKIILRSGDVRSYLKVKGYGTALPVKDIAASPAYKKGNDKEFTKAFTPNSKG
YTIEFKIKTDDSEKSFYPYFVNEKGYGFKAYITSNEIGLFNAYKKEITNPATNGKAGGKGKFYNNDGQAHIYRFAITPDN
RAFIYRDGIPVDSVRIIDYAPQPNFAEKVGKPVENLLKNPNFEGEFDINPETKLVSRVEGWDVVISDRWNSEQQILPEEI
DNNQDLDNHVFEIRPYKWAAGWSDGILMQVVDVVPNENYTLSALLKGGIAKKEGKLTGKMIIEEVQDPEKKVITEIASDN
WETYSMDYTTSAECNQIRVSFTVGRGGWGNDIGAVRVDNAKLTGTSRTYSPKFGFIDNTADVEYFTIDESGAYAPAQPEI
TINIED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54030; Mature: 54030

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKYVKIMFLSLTLLTISTTATYAVQPKDDKKENEALQTSTEEHLPLLTINGTNASSSF
CCCCEEEEEEEEEEEEEEEECEEEEECCCCCCCHHHHHHCCHHHCCCEEEEECCCCCCEE
IVNSEALLGKEITITAPNGFTVTPTVIAANSGKQKVKVTLNSTKRLTEGKIILRSGDVRS
EEECHHHCCCEEEEECCCCEEECEEEEEECCCCEEEEEEECCCCEECCCEEEEEECCCCE
YLKVKGYGTALPVKDIAASPAYKKGNDKEFTKAFTPNSKGYTIEFKIKTDDSEKSFYPYF
EEEEECCCCCCCHHHHCCCCCCCCCCCCHHHEEECCCCCCEEEEEEEECCCCCCCCCCEE
VNEKGYGFKAYITSNEIGLFNAYKKEITNPATNGKAGGKGKFYNNDGQAHIYRFAITPDN
ECCCCCCEEEEEECCCCEEEHHHHHHHCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCC
RAFIYRDGIPVDSVRIIDYAPQPNFAEKVGKPVENLLKNPNFEGEFDINPETKLVSRVEG
EEEEEECCCCCCCEEEEEECCCCCHHHHHCHHHHHHHHCCCCCCEEECCCCHHHHHHCCC
WDVVISDRWNSEQQILPEEIDNNQDLDNHVFEIRPYKWAAGWSDGILMQVVDVVPNENYT
CEEEEECCCCCCCCCCHHHCCCCCCCCCCEEEEECEEEECCCCCCHHEEHHHHCCCCCEE
LSALLKGGIAKKEGKLTGKMIIEEVQDPEKKVITEIASDNWETYSMDYTTSAECNQIRVS
EEEEHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEE
FTVGRGGWGNDIGAVRVDNAKLTGTSRTYSPKFGFIDNTADVEYFTIDESGAYAPAQPEI
EEECCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCE
TINIED
EEEECC
>Mature Secondary Structure
MKKKYVKIMFLSLTLLTISTTATYAVQPKDDKKENEALQTSTEEHLPLLTINGTNASSSF
CCCCEEEEEEEEEEEEEEEECEEEEECCCCCCCHHHHHHCCHHHCCCEEEEECCCCCCEE
IVNSEALLGKEITITAPNGFTVTPTVIAANSGKQKVKVTLNSTKRLTEGKIILRSGDVRS
EEECHHHCCCEEEEECCCCEEECEEEEEECCCCEEEEEEECCCCEECCCEEEEEECCCCE
YLKVKGYGTALPVKDIAASPAYKKGNDKEFTKAFTPNSKGYTIEFKIKTDDSEKSFYPYF
EEEEECCCCCCCHHHHCCCCCCCCCCCCHHHEEECCCCCCEEEEEEEECCCCCCCCCCEE
VNEKGYGFKAYITSNEIGLFNAYKKEITNPATNGKAGGKGKFYNNDGQAHIYRFAITPDN
ECCCCCCEEEEEECCCCEEEHHHHHHHCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCC
RAFIYRDGIPVDSVRIIDYAPQPNFAEKVGKPVENLLKNPNFEGEFDINPETKLVSRVEG
EEEEEECCCCCCCEEEEEECCCCCHHHHHCHHHHHHHHCCCCCCEEECCCCHHHHHHCCC
WDVVISDRWNSEQQILPEEIDNNQDLDNHVFEIRPYKWAAGWSDGILMQVVDVVPNENYT
CEEEEECCCCCCCCCCHHHCCCCCCCCCCEEEEECEEEECCCCCCHHEEHHHHCCCCCEE
LSALLKGGIAKKEGKLTGKMIIEEVQDPEKKVITEIASDNWETYSMDYTTSAECNQIRVS
EEEEHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEE
FTVGRGGWGNDIGAVRVDNAKLTGTSRTYSPKFGFIDNTADVEYFTIDESGAYAPAQPEI
EEECCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCE
TINIED
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA