| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345569
Identifier: 29345569
GI number: 29345569
Start: 164674
End: 165546
Strand: Reverse
Name: 29345569
Synonym: BT_0159
Alternate gene names: NA
Gene position: 165546-164674 (Counterclockwise)
Preceding gene: 29345570
Following gene: 29345568
Centisome position: 2.64
GC content: 44.33
Gene sequence:
>873_bases ATGATTCCAACCCAACAGGATATTGCCGAATTCACCCGCTTTCAACGAAACGAGATAACAGAAAGCATCTTATATGAACG GCTCGCATCTATCGAAAAAGACGAGAATAACCGCAAAACGCTCCGACTGATAGCAGCAGAAGAAAAGTCGCATTACGCTA TCCTCAAGAAATATACAGGAAAAGAAATCGGTCCGGACTATAAGCGTATCGCCCGTTTCTACTTTCTGGCACGCATACTA GGTATCACATTCGCCATCAAATTAATGGAGTCCAGTGAGGAAAATGCCCATAATAATTATGATAAATATGCCCATATACC GGACCTACAACGGCTGGCACATGAAGAAGAAGTGCACGAGCAAAAGTTGATTTCACTAATCAATGAAGAACGGCTGGAAT ATATGGGATCGGTCGTACTGGGACTTAATGATGCGCTGGTTGAATTTACAGGTGCACTGGCAGGTTTCACACTTGCCTTG AGTGACAGTAAACTGATAGCACTGACCGGCAGTATCACAGGGATAGCCGCTGCACTGTCAATGGCATCTTCCGAATATCT TTCTACCAAATCGGAAGGGGATGATAAGAAACATCCGGTAAAAGCAGCTGTATATACAGGAATCGCCTATCTGATCACGG TAGTGTCACTGGTTACTCCGTTTATACTGATCAGCAATGTAATCGTAGCTTTGGGAGTGATGCTGACCATGGCACTTATC ATCATTGCCCTTTTCAACTACTATTATTCCGTAGCCCGTGGTGAAAGCTTCCGAAAGCGGTTTACAGAAATGGCTGTACT CAGTTTCAGCGTGGCTGGTATCAGCTTCCTGATAGGATATGCTCTAAAGACATTTACCGGAATCGATGCCTGA
Upstream 100 bases:
>100_bases ATAAAATATAAACTTATAATAAATTTTATTGTGCTGTCCGGCAAGGCAAAAAGAATTCTGTCTTTTTATTGTATCTTTGC GCGACCAAAAAAATAAAGAA
Downstream 100 bases:
>100_bases AATCAATAAAGCATCCGACATCATTGAAGGTCCGGCAGTTACATAATAAAGAAACCTAAACCACCAGATTAAATAATAAA GCGTTATATTTAGAATGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Ferritin CCC1 C Ferritin CCC1 Like C; Rubrerythrin Subfamily; Transmembrane Protein
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MIPTQQDIAEFTRFQRNEITESILYERLASIEKDENNRKTLRLIAAEEKSHYAILKKYTGKEIGPDYKRIARFYFLARIL GITFAIKLMESSEENAHNNYDKYAHIPDLQRLAHEEEVHEQKLISLINEERLEYMGSVVLGLNDALVEFTGALAGFTLAL SDSKLIALTGSITGIAAALSMASSEYLSTKSEGDDKKHPVKAAVYTGIAYLITVVSLVTPFILISNVIVALGVMLTMALI IIALFNYYYSVARGESFRKRFTEMAVLSFSVAGISFLIGYALKTFTGIDA
Sequences:
>Translated_290_residues MIPTQQDIAEFTRFQRNEITESILYERLASIEKDENNRKTLRLIAAEEKSHYAILKKYTGKEIGPDYKRIARFYFLARIL GITFAIKLMESSEENAHNNYDKYAHIPDLQRLAHEEEVHEQKLISLINEERLEYMGSVVLGLNDALVEFTGALAGFTLAL SDSKLIALTGSITGIAAALSMASSEYLSTKSEGDDKKHPVKAAVYTGIAYLITVVSLVTPFILISNVIVALGVMLTMALI IIALFNYYYSVARGESFRKRFTEMAVLSFSVAGISFLIGYALKTFTGIDA >Mature_290_residues MIPTQQDIAEFTRFQRNEITESILYERLASIEKDENNRKTLRLIAAEEKSHYAILKKYTGKEIGPDYKRIARFYFLARIL GITFAIKLMESSEENAHNNYDKYAHIPDLQRLAHEEEVHEQKLISLINEERLEYMGSVVLGLNDALVEFTGALAGFTLAL SDSKLIALTGSITGIAAALSMASSEYLSTKSEGDDKKHPVKAAVYTGIAYLITVVSLVTPFILISNVIVALGVMLTMALI IIALFNYYYSVARGESFRKRFTEMAVLSFSVAGISFLIGYALKTFTGIDA
Specific function: Unknown
COG id: COG1814
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32349; Mature: 32349
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPTQQDIAEFTRFQRNEITESILYERLASIEKDENNRKTLRLIAAEEKSHYAILKKYTG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHCC KEIGPDYKRIARFYFLARILGITFAIKLMESSEENAHNNYDKYAHIPDLQRLAHEEEVHE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHHHHH QKLISLINEERLEYMGSVVLGLNDALVEFTGALAGFTLALSDSKLIALTGSITGIAAALS HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEECCCEEEEEECHHHHHHHHHH MASSEYLSTKSEGDDKKHPVKAAVYTGIAYLITVVSLVTPFILISNVIVALGVMLTMALI HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIALFNYYYSVARGESFRKRFTEMAVLSFSVAGISFLIGYALKTFTGIDA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIPTQQDIAEFTRFQRNEITESILYERLASIEKDENNRKTLRLIAAEEKSHYAILKKYTG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHCC KEIGPDYKRIARFYFLARILGITFAIKLMESSEENAHNNYDKYAHIPDLQRLAHEEEVHE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHHHHH QKLISLINEERLEYMGSVVLGLNDALVEFTGALAGFTLALSDSKLIALTGSITGIAAALS HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEECCCEEEEEECHHHHHHHHHH MASSEYLSTKSEGDDKKHPVKAAVYTGIAYLITVVSLVTPFILISNVIVALGVMLTMALI HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIALFNYYYSVARGESFRKRFTEMAVLSFSVAGISFLIGYALKTFTGIDA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA