| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345570
Identifier: 29345570
GI number: 29345570
Start: 165668
End: 166102
Strand: Reverse
Name: 29345570
Synonym: BT_0160
Alternate gene names: NA
Gene position: 166102-165668 (Counterclockwise)
Preceding gene: 29345571
Following gene: 29345569
Centisome position: 2.65
GC content: 45.06
Gene sequence:
>435_bases ATGAAATACGGAGTTAACAAAGAAATCTTACTTATCACAGCAGGCACCGTCTGGATTATCGCCGGTGCCAATATCTTGCG AATAGGCATCGTTACATGGCTTAATAACTCCGAAGGCTGGATGTTCAAGATAGGAGAAGCAACCATCGTCTTTCTGCTGT TCTTCGTATTAATCTTCAAAAGACTCTATTACAAGCATACTCAAAGGATCGAACGGAAAAAGGAACAGAAGAACTGCCCT TTCTCCTTCTTCGATGTCAAAAGCTGGATCGTCATGATCTTTATGATCTGTATGGGCATCACCATCCGCAGCTTCCACCT GTTGCCCGAAAGTTTTATATCTGTCTTCTACACAGGACTGTCCATCGCACTGATCCTGACCGGCGTACTCTTCATCCGTT ACTGGTGGCTGAGGCGCAAGACGAATCCGGTGTAA
Upstream 100 bases:
>100_bases GAGCTACACTGACCTGCATTTCTTTACTAATTACAACTTTGTCGAAGAAGTGAGTCAACAAAACGGAGCAGTAAACCGTT TAATACAAAAAAAGGGAAAC
Downstream 100 bases:
>100_bases CAGGAAAGCATCTATATTCCAATAAAATATAAACTTATAATAAATTTTATTGTGCTGTCCGGCAAGGCAAAAAGAATTCT GTCTTTTTATTGTATCTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MKYGVNKEILLITAGTVWIIAGANILRIGIVTWLNNSEGWMFKIGEATIVFLLFFVLIFKRLYYKHTQRIERKKEQKNCP FSFFDVKSWIVMIFMICMGITIRSFHLLPESFISVFYTGLSIALILTGVLFIRYWWLRRKTNPV
Sequences:
>Translated_144_residues MKYGVNKEILLITAGTVWIIAGANILRIGIVTWLNNSEGWMFKIGEATIVFLLFFVLIFKRLYYKHTQRIERKKEQKNCP FSFFDVKSWIVMIFMICMGITIRSFHLLPESFISVFYTGLSIALILTGVLFIRYWWLRRKTNPV >Mature_144_residues MKYGVNKEILLITAGTVWIIAGANILRIGIVTWLNNSEGWMFKIGEATIVFLLFFVLIFKRLYYKHTQRIERKKEQKNCP FSFFDVKSWIVMIFMICMGITIRSFHLLPESFISVFYTGLSIALILTGVLFIRYWWLRRKTNPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16995; Mature: 16995
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYGVNKEILLITAGTVWIIAGANILRIGIVTWLNNSEGWMFKIGEATIVFLLFFVLIFK CCCCCCCCEEEEECCEEEEEECCHHHHHHHHHEEECCCCCEEEECHHHHHHHHHHHHHHH RLYYKHTQRIERKKEQKNCPFSFFDVKSWIVMIFMICMGITIRSFHLLPESFISVFYTGL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH SIALILTGVLFIRYWWLRRKTNPV HHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKYGVNKEILLITAGTVWIIAGANILRIGIVTWLNNSEGWMFKIGEATIVFLLFFVLIFK CCCCCCCCEEEEECCEEEEEECCHHHHHHHHHEEECCCCCEEEECHHHHHHHHHHHHHHH RLYYKHTQRIERKKEQKNCPFSFFDVKSWIVMIFMICMGITIRSFHLLPESFISVFYTGL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH SIALILTGVLFIRYWWLRRKTNPV HHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA