Click here to switch to the map view.

The map label for this gene is yicI [C]

Identifier: 29140585

GI number: 29140585

Start: 48368

End: 50407

Strand: Reverse

Name: yicI [C]

Synonym: t0043

Alternate gene names: 29140585

Gene position: 50407-48368 (Counterclockwise)

Preceding gene: 29140586

Following gene: 29140578

Centisome position: 1.05

GC content: 54.26

Gene sequence:

>2040_bases
ATGCCATTTATGCAACAAGACCCACGTCGTCTGGTCTGGCAGCAAAACGATCGCTATTTATGGATTGAACCCTGGGGCGA
GAACAGCCTGCGCGTACGCAGTGGCCGTCATCTGCCGGTAATGAGAAATGAAGACTGGGCATTGACTGAGCCAGTCGCAG
AAAGCCAGTGCCACATTGATTATGAGCACCACCAAGCAACGCTGACCAACGGCAAAATTATCGCTATCGTCAATCAAAAA
GGACAAGTTACCTTTTACCGCCATCCACACAAACCCCTGTTGCAGGAGTTTTGGCGCCTGCGGGGCGAAATTGGCGAGGA
TGAATCATCTCACGGCCAGTACGTCAGCGCACTCAACCTTGAGGGACGCGAGTTCCGCCCGATTCAGGGTGGGAAATATT
CACTGAAAGCCCGCTTCGAAGCCACCGAAGGGGAAAAAATTTATGGCATGGGGCAGTATCAACAGGCCAACCTGGATCTC
AAAGGATGCGTGCTTGAGCTGGCGCAACGTAACTCCCAGGCCTCAGTACCATTTATGCTCTCCAGTCTGGGCTACGGATT
TTTATGGAACAACCCGGCAGTCGGACGCGTAACCTTTGCCCAAAACGTTACCGAATGGGAAGCGCAGGTCAGCGAACAGT
TAGACTACTGGATCACGGCTGGCGATACCCCGGCAGAAATTGGCCGGGCTTACGCGCTGGCTACCGGCACGCCGCCGATG
ATGCCGGACTACGCCATGGGCTTCTGGCAGTGCAAACTCCGTTATCGTACGCAGGAAGAGCTGCTGGAGGTCGCCCGCGA
ATATAAGCGCCGCAATCTACCTATCTCGGTGATCGTTATCGACTTCTTTCACTGGCCGAATCAGGGTGACTGGATGTTCG
ATGCGCGCGACTGGCCCGATCCTGATGCCATGATTGCCGAGCTGAAATCGCTGGGAATTGAGCTGATGGTCTCCGTCTGG
CCGACGGTGGATAACCGCACCGAAAGCTATCGGGAGATGCGTGAAAACGGCTGGCTGGTACAAACGGAACGTGGCTTGCC
GATCAATATGGATTTCCTCGGCAATACCACTTACTTTGATGCGACTCATCCGGGCGCGCGCGACTATGTCTGGGGCAAAG
CCAAACGCAACTATCACGATAAAGGCGTGAAGCTATTCTGGTTAGATGAAGCCGAACCTGAGTTCAGCGTTTACGACTAC
GACAACTATCGCTACCATGCCGGACCGGTACTGGAAGTGGGCAATATCTACCCACGCATGTACGCTAAAACCTTTTTTGA
TGGCATGAAAGCCGATGGCGAAGACCAGGTTATCAACCTGCTACGCTGCGCCTGGGCCGGCAGTCAGAAGTACGGCGCTC
TGGTCTGGTCAGGGGATATTCACTCCTCGTTTAGATCGCTGCGCAACCAGTTTGCCGCCGGACTCAATATGGGAATAGCA
GGGATACCGTGGTGGACGACGGATATCGGCGGTTTCCATGGCGGTAATATTCACGACCCGAAATTCCATGAATTGCTGAT
TCGCTGGTTCCAGTGGGGCGTCTTTAGTCCGGTGATGCGTCTGCACGGCAACCGCGATCCGCAAATTTTACCCGCGCAAC
CGTATCGGGATGGTATCGCCCAGTGCCCTACAGGTGCGCCGAACGAGGTCTGGAGCTACGGTGAGGAAGTATGCGACGTA
CTGACAGGTTGCCTAGCGTTGCGAGAAAAACTCAAGCCCTATATCAAAGCGCTGATGGAGGAAACCCATAAGCACAATAC
GCCAGTGATGCGCCCCCTGTTCTTTGAATTCCCCGAACAGGAAACAAGTTGGACAATCACCGACCAGTACTGTTTTGGTC
CTGACCTGCTGATCGCCCCCGTCATGCATGAAGGTATGCGCGAACGTGATGTCTGGCTACCAGAAGGGGAAACATGGACG
GATCTTGCGACCGGTGAAAGCTATTCAGGAGGGCAGACGCTGCATTACGCTACGCCACTGAACAGAATTCCGGTGTTTAT
CCGCGAAGGTGGGCAGTACCGTAGCCTACTGAACTTGTAG

Upstream 100 bases:

>100_bases
TCGCAAATACGAAGCGATGGAAGAGAAGATTCGCCACGATCTGGAAACCATCAACTCATAACGTTCTTTACCTTCACCCT
CGAATATAGGAGGCACCACC

Downstream 100 bases:

>100_bases
AATGATTCCGGCTGCGGGTTAGTTCCGCAGCCGGAAGTATTACGGTAGGTATGTCTACTGTAGCTTAAACAATGCCGAGT
AGTCCGCATTGCAAATACGC

Product: glycosyl hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 679; Mature: 678

Protein sequence:

>679_residues
MPFMQQDPRRLVWQQNDRYLWIEPWGENSLRVRSGRHLPVMRNEDWALTEPVAESQCHIDYEHHQATLTNGKIIAIVNQK
GQVTFYRHPHKPLLQEFWRLRGEIGEDESSHGQYVSALNLEGREFRPIQGGKYSLKARFEATEGEKIYGMGQYQQANLDL
KGCVLELAQRNSQASVPFMLSSLGYGFLWNNPAVGRVTFAQNVTEWEAQVSEQLDYWITAGDTPAEIGRAYALATGTPPM
MPDYAMGFWQCKLRYRTQEELLEVAREYKRRNLPISVIVIDFFHWPNQGDWMFDARDWPDPDAMIAELKSLGIELMVSVW
PTVDNRTESYREMRENGWLVQTERGLPINMDFLGNTTYFDATHPGARDYVWGKAKRNYHDKGVKLFWLDEAEPEFSVYDY
DNYRYHAGPVLEVGNIYPRMYAKTFFDGMKADGEDQVINLLRCAWAGSQKYGALVWSGDIHSSFRSLRNQFAAGLNMGIA
GIPWWTTDIGGFHGGNIHDPKFHELLIRWFQWGVFSPVMRLHGNRDPQILPAQPYRDGIAQCPTGAPNEVWSYGEEVCDV
LTGCLALREKLKPYIKALMEETHKHNTPVMRPLFFEFPEQETSWTITDQYCFGPDLLIAPVMHEGMRERDVWLPEGETWT
DLATGESYSGGQTLHYATPLNRIPVFIREGGQYRSLLNL

Sequences:

>Translated_679_residues
MPFMQQDPRRLVWQQNDRYLWIEPWGENSLRVRSGRHLPVMRNEDWALTEPVAESQCHIDYEHHQATLTNGKIIAIVNQK
GQVTFYRHPHKPLLQEFWRLRGEIGEDESSHGQYVSALNLEGREFRPIQGGKYSLKARFEATEGEKIYGMGQYQQANLDL
KGCVLELAQRNSQASVPFMLSSLGYGFLWNNPAVGRVTFAQNVTEWEAQVSEQLDYWITAGDTPAEIGRAYALATGTPPM
MPDYAMGFWQCKLRYRTQEELLEVAREYKRRNLPISVIVIDFFHWPNQGDWMFDARDWPDPDAMIAELKSLGIELMVSVW
PTVDNRTESYREMRENGWLVQTERGLPINMDFLGNTTYFDATHPGARDYVWGKAKRNYHDKGVKLFWLDEAEPEFSVYDY
DNYRYHAGPVLEVGNIYPRMYAKTFFDGMKADGEDQVINLLRCAWAGSQKYGALVWSGDIHSSFRSLRNQFAAGLNMGIA
GIPWWTTDIGGFHGGNIHDPKFHELLIRWFQWGVFSPVMRLHGNRDPQILPAQPYRDGIAQCPTGAPNEVWSYGEEVCDV
LTGCLALREKLKPYIKALMEETHKHNTPVMRPLFFEFPEQETSWTITDQYCFGPDLLIAPVMHEGMRERDVWLPEGETWT
DLATGESYSGGQTLHYATPLNRIPVFIREGGQYRSLLNL
>Mature_678_residues
PFMQQDPRRLVWQQNDRYLWIEPWGENSLRVRSGRHLPVMRNEDWALTEPVAESQCHIDYEHHQATLTNGKIIAIVNQKG
QVTFYRHPHKPLLQEFWRLRGEIGEDESSHGQYVSALNLEGREFRPIQGGKYSLKARFEATEGEKIYGMGQYQQANLDLK
GCVLELAQRNSQASVPFMLSSLGYGFLWNNPAVGRVTFAQNVTEWEAQVSEQLDYWITAGDTPAEIGRAYALATGTPPMM
PDYAMGFWQCKLRYRTQEELLEVAREYKRRNLPISVIVIDFFHWPNQGDWMFDARDWPDPDAMIAELKSLGIELMVSVWP
TVDNRTESYREMRENGWLVQTERGLPINMDFLGNTTYFDATHPGARDYVWGKAKRNYHDKGVKLFWLDEAEPEFSVYDYD
NYRYHAGPVLEVGNIYPRMYAKTFFDGMKADGEDQVINLLRCAWAGSQKYGALVWSGDIHSSFRSLRNQFAAGLNMGIAG
IPWWTTDIGGFHGGNIHDPKFHELLIRWFQWGVFSPVMRLHGNRDPQILPAQPYRDGIAQCPTGAPNEVWSYGEEVCDVL
TGCLALREKLKPYIKALMEETHKHNTPVMRPLFFEFPEQETSWTITDQYCFGPDLLIAPVMHEGMRERDVWLPEGETWTD
LATGESYSGGQTLHYATPLNRIPVFIREGGQYRSLLNL

Specific function: Unknown

COG id: COG1501

COG function: function code G; Alpha-glucosidases, family 31 of glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 31 family [H]

Homologues:

Organism=Homo sapiens, GI38202257, Length=587, Percent_Identity=29.3015332197615, Blast_Score=193, Evalue=5e-49,
Organism=Homo sapiens, GI88900491, Length=587, Percent_Identity=29.3015332197615, Blast_Score=192, Evalue=6e-49,
Organism=Homo sapiens, GI66346737, Length=689, Percent_Identity=27.1407837445573, Blast_Score=180, Evalue=4e-45,
Organism=Homo sapiens, GI119393895, Length=538, Percent_Identity=26.5799256505576, Blast_Score=142, Evalue=1e-33,
Organism=Homo sapiens, GI119393893, Length=538, Percent_Identity=26.5799256505576, Blast_Score=142, Evalue=1e-33,
Organism=Homo sapiens, GI119393891, Length=538, Percent_Identity=26.5799256505576, Blast_Score=142, Evalue=1e-33,
Organism=Homo sapiens, GI221316699, Length=533, Percent_Identity=25.515947467167, Blast_Score=124, Evalue=4e-28,
Organism=Homo sapiens, GI153791946, Length=402, Percent_Identity=27.1144278606965, Blast_Score=110, Evalue=5e-24,
Organism=Homo sapiens, GI310115361, Length=259, Percent_Identity=23.9382239382239, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI157364974, Length=260, Percent_Identity=24.2307692307692, Blast_Score=79, Evalue=1e-14,
Organism=Escherichia coli, GI2367256, Length=666, Percent_Identity=24.4744744744745, Blast_Score=173, Evalue=3e-44,
Organism=Escherichia coli, GI2367323, Length=400, Percent_Identity=28, Blast_Score=133, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI71991189, Length=475, Percent_Identity=28.4210526315789, Blast_Score=184, Evalue=9e-47,
Organism=Caenorhabditis elegans, GI17560800, Length=654, Percent_Identity=25.0764525993884, Blast_Score=166, Evalue=5e-41,
Organism=Caenorhabditis elegans, GI17560798, Length=654, Percent_Identity=25.0764525993884, Blast_Score=165, Evalue=7e-41,
Organism=Caenorhabditis elegans, GI71985706, Length=237, Percent_Identity=27.8481012658228, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI32563849, Length=260, Percent_Identity=24.2307692307692, Blast_Score=80, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6319706, Length=561, Percent_Identity=25.3119429590018, Blast_Score=121, Evalue=4e-28,
Organism=Drosophila melanogaster, GI24643749, Length=481, Percent_Identity=25.5717255717256, Blast_Score=139, Evalue=5e-33,
Organism=Drosophila melanogaster, GI24643753, Length=481, Percent_Identity=25.5717255717256, Blast_Score=139, Evalue=5e-33,
Organism=Drosophila melanogaster, GI24643751, Length=481, Percent_Identity=25.5717255717256, Blast_Score=139, Evalue=5e-33,
Organism=Drosophila melanogaster, GI24643746, Length=481, Percent_Identity=25.5717255717256, Blast_Score=139, Evalue=5e-33,
Organism=Drosophila melanogaster, GI21357605, Length=481, Percent_Identity=25.5717255717256, Blast_Score=139, Evalue=5e-33,
Organism=Drosophila melanogaster, GI24650054, Length=393, Percent_Identity=25.4452926208651, Blast_Score=106, Evalue=5e-23,
Organism=Drosophila melanogaster, GI28571438, Length=416, Percent_Identity=23.3173076923077, Blast_Score=96, Evalue=8e-20,
Organism=Drosophila melanogaster, GI28571440, Length=416, Percent_Identity=23.3173076923077, Blast_Score=95, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011013
- InterPro:   IPR000322
- InterPro:   IPR017853 [H]

Pfam domain/function: PF01055 Glyco_hydro_31 [H]

EC number: NA

Molecular weight: Translated: 78371; Mature: 78240

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFMQQDPRRLVWQQNDRYLWIEPWGENSLRVRSGRHLPVMRNEDWALTEPVAESQCHID
CCCCCCCCHHHHEECCCCEEEEEECCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCEEE
YEHHQATLTNGKIIAIVNQKGQVTFYRHPHKPLLQEFWRLRGEIGEDESSHGQYVSALNL
EHHCEEEECCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECC
EGREFRPIQGGKYSLKARFEATEGEKIYGMGQYQQANLDLKGCVLELAQRNSQASVPFML
CCCEECCCCCCCEEEEEEEECCCCCEEEECCCCEECCCCHHHHHHHHHHCCCCCCCCHHH
SSLGYGFLWNNPAVGRVTFAQNVTEWEAQVSEQLDYWITAGDTPAEIGRAYALATGTPPM
HHCCCCEEECCCCCEEEEHHCCHHHHHHHHHHCCCEEEECCCCHHHHCCEEEEECCCCCC
MPDYAMGFWQCKLRYRTQEELLEVAREYKRRNLPISVIVIDFFHWPNQGDWMFDARDWPD
CCHHHCCEEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEEECCCCCCC
PDAMIAELKSLGIELMVSVWPTVDNRTESYREMRENGWLVQTERGLPINMDFLGNTTYFD
HHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCEEEEEECCCCEEEE
ATHPGARDYVWGKAKRNYHDKGVKLFWLDEAEPEFSVYDYDNYRYHAGPVLEVGNIYPRM
CCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCCEEEEECCCEEECCCCEEECCCCCHHH
YAKTFFDGMKADGEDQVINLLRCAWAGSQKYGALVWSGDIHSSFRSLRNQFAAGLNMGIA
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCC
GIPWWTTDIGGFHGGNIHDPKFHELLIRWFQWGVFSPVMRLHGNRDPQILPAQPYRDGIA
CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHH
QCPTGAPNEVWSYGEEVCDVLTGCLALREKLKPYIKALMEETHKHNTPVMRPLFFEFPEQ
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCC
ETSWTITDQYCFGPDLLIAPVMHEGMRERDVWLPEGETWTDLATGESYSGGQTLHYATPL
CCCEEEEECEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
NRIPVFIREGGQYRSLLNL
CCCCEEEECCCCHHHHHCC
>Mature Secondary Structure 
PFMQQDPRRLVWQQNDRYLWIEPWGENSLRVRSGRHLPVMRNEDWALTEPVAESQCHID
CCCCCCCHHHHEECCCCEEEEEECCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCEEE
YEHHQATLTNGKIIAIVNQKGQVTFYRHPHKPLLQEFWRLRGEIGEDESSHGQYVSALNL
EHHCEEEECCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECC
EGREFRPIQGGKYSLKARFEATEGEKIYGMGQYQQANLDLKGCVLELAQRNSQASVPFML
CCCEECCCCCCCEEEEEEEECCCCCEEEECCCCEECCCCHHHHHHHHHHCCCCCCCCHHH
SSLGYGFLWNNPAVGRVTFAQNVTEWEAQVSEQLDYWITAGDTPAEIGRAYALATGTPPM
HHCCCCEEECCCCCEEEEHHCCHHHHHHHHHHCCCEEEECCCCHHHHCCEEEEECCCCCC
MPDYAMGFWQCKLRYRTQEELLEVAREYKRRNLPISVIVIDFFHWPNQGDWMFDARDWPD
CCHHHCCEEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEEECCCCCCC
PDAMIAELKSLGIELMVSVWPTVDNRTESYREMRENGWLVQTERGLPINMDFLGNTTYFD
HHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCEEEEEECCCCEEEE
ATHPGARDYVWGKAKRNYHDKGVKLFWLDEAEPEFSVYDYDNYRYHAGPVLEVGNIYPRM
CCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCCEEEEECCCEEECCCCEEECCCCCHHH
YAKTFFDGMKADGEDQVINLLRCAWAGSQKYGALVWSGDIHSSFRSLRNQFAAGLNMGIA
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCC
GIPWWTTDIGGFHGGNIHDPKFHELLIRWFQWGVFSPVMRLHGNRDPQILPAQPYRDGIA
CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHH
QCPTGAPNEVWSYGEEVCDVLTGCLALREKLKPYIKALMEETHKHNTPVMRPLFFEFPEQ
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCC
ETSWTITDQYCFGPDLLIAPVMHEGMRERDVWLPEGETWTDLATGESYSGGQTLHYATPL
CCCEEEEECEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
NRIPVFIREGGQYRSLLNL
CCCCEEEECCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7808389 [H]