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The map label for this gene is xylP [H]

Identifier: 29140586

GI number: 29140586

Start: 50447

End: 51820

Strand: Reverse

Name: xylP [H]

Synonym: t0044

Alternate gene names: 29140586

Gene position: 51820-50447 (Counterclockwise)

Preceding gene: 29140587

Following gene: 29140585

Centisome position: 1.08

GC content: 48.69

Gene sequence:

>1374_bases
ATGAGTTCTGTCATTGAGGATACCCAGCCTTCCGGGTCAGCATCATTGTCTTTACTACAGCGTATTAGCTACGGCTCTTT
GGATGTGGCGGGTAATCTGCTATACTGCTTCGGTTCAACGTACATTTTATATTTCTATACAGACGTTGCGGGCATTAGCC
TTGCCGTAGCAGGCATTATCCTGCTGCTGGCGCGTATTGTCGATGGCATAGACGCCCCTATATGGGGGATCATCATCGAT
AAAACGCGTTCACGCTACGGTAAATGTCGTCCCTGGTTTTTATGGTTACCGCTGCCTTTTGCGGTATTCAGCGCGCTGTC
ATTTTGGTCTCCTGATATCAGTATAACAGGAAAAGCCATCTATGCAGCAATATCTTATATGATTGCCAGCATTCTATTTA
CCGGACTTAATACACCACTCAGTGCAATATTACCCCTGATGACCTTATCTCCCAAGGAAAGACTGGTTTTAAATTCCTGG
CGAATGACCGGTGGGCAAATTGGGGTTTTATTAATGAACGCGACCGCCTTGCCGTTAGTCGCTTTTTTAGGTAACGGTGA
TGATCACGCTGGTTTTATTTATACGGCGATTACATTTGCCATTATATCTTGCGCGCTAACGCTCTTTGCGTTTAAAAACA
TTCGTGAAATGGATGCGGATAAAATACAGCATGAACCTAAGTTGCCGATGAAAAAAAGTTTCGCGGCGATGAAAGGTAAC
TGGCCATGGATTCTGATGGTGCTGGCTAATCTGATCTTCTGGATTGCCCTACAGCAGCGCTCCACGACCATTGTCTATTA
TCTGACCTACAACCTCGACCGTAAAGATCTGGTGCCGCTGATTAACAGCCTGGCGACGATTCAGATCCTGTTTATCATCG
CTATCCCCTTCTTTAGCAAATACCTGGCTAAAACCTGGATATGGGTAGGCGGTCTGCTGGTCGCCACGTTTGGCGGCGTC
ATGATGTGGCTGGCAGCGGACAACATTACTTTCCTCATCGCCGCCTGGATACTCGGCAATATCGGCAGCGGTATCGCCTG
CTCAATGCCATTTGCCATGCTGGGCTTCGCCGTTGATTTCGGCGCCTGGAAGACCGGTATTAAGGCTACCGGCATTCTTA
TCGCCTTCGGCAGTACCTTCTGCATCAAGATGGGTAGTGGCCTCGGTACTGCTTTAGCCGCCTGGATCATGAACAGTTTT
GGCTATGTCCCCAACCATGCCCAGAGTGCTGCGGGTCTGGAGGGAATTACCTGGGCCTTTATCTGGGCACCCGCCCTACT
CTTCGCGCTCGCAGCGATCCCATTACTTTTCTTTCGCAAATACGAAGCGATGGAAGAGAAGATTCGCCACGATCTGGAAA
CCATCAACTCATAA

Upstream 100 bases:

>100_bases
AGGTTAAATTCAGAAACGACATAAAAATAATATTCAAAACTTGCTTAGAAAGTAGAGGTTGTTTTTCTGGGCGTATCGTA
CCAATATCGGAGTTATCATT

Downstream 100 bases:

>100_bases
CGTTCTTTACCTTCACCCTCGAATATAGGAGGCACCACCATGCCATTTATGCAACAAGACCCACGTCGTCTGGTCTGGCA
GCAAAACGATCGCTATTTAT

Product: transport protein

Products: NA

Alternate protein names: Xylose transporter [H]

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MSSVIEDTQPSGSASLSLLQRISYGSLDVAGNLLYCFGSTYILYFYTDVAGISLAVAGIILLLARIVDGIDAPIWGIIID
KTRSRYGKCRPWFLWLPLPFAVFSALSFWSPDISITGKAIYAAISYMIASILFTGLNTPLSAILPLMTLSPKERLVLNSW
RMTGGQIGVLLMNATALPLVAFLGNGDDHAGFIYTAITFAIISCALTLFAFKNIREMDADKIQHEPKLPMKKSFAAMKGN
WPWILMVLANLIFWIALQQRSTTIVYYLTYNLDRKDLVPLINSLATIQILFIIAIPFFSKYLAKTWIWVGGLLVATFGGV
MMWLAADNITFLIAAWILGNIGSGIACSMPFAMLGFAVDFGAWKTGIKATGILIAFGSTFCIKMGSGLGTALAAWIMNSF
GYVPNHAQSAAGLEGITWAFIWAPALLFALAAIPLLFFRKYEAMEEKIRHDLETINS

Sequences:

>Translated_457_residues
MSSVIEDTQPSGSASLSLLQRISYGSLDVAGNLLYCFGSTYILYFYTDVAGISLAVAGIILLLARIVDGIDAPIWGIIID
KTRSRYGKCRPWFLWLPLPFAVFSALSFWSPDISITGKAIYAAISYMIASILFTGLNTPLSAILPLMTLSPKERLVLNSW
RMTGGQIGVLLMNATALPLVAFLGNGDDHAGFIYTAITFAIISCALTLFAFKNIREMDADKIQHEPKLPMKKSFAAMKGN
WPWILMVLANLIFWIALQQRSTTIVYYLTYNLDRKDLVPLINSLATIQILFIIAIPFFSKYLAKTWIWVGGLLVATFGGV
MMWLAADNITFLIAAWILGNIGSGIACSMPFAMLGFAVDFGAWKTGIKATGILIAFGSTFCIKMGSGLGTALAAWIMNSF
GYVPNHAQSAAGLEGITWAFIWAPALLFALAAIPLLFFRKYEAMEEKIRHDLETINS
>Mature_456_residues
SSVIEDTQPSGSASLSLLQRISYGSLDVAGNLLYCFGSTYILYFYTDVAGISLAVAGIILLLARIVDGIDAPIWGIIIDK
TRSRYGKCRPWFLWLPLPFAVFSALSFWSPDISITGKAIYAAISYMIASILFTGLNTPLSAILPLMTLSPKERLVLNSWR
MTGGQIGVLLMNATALPLVAFLGNGDDHAGFIYTAITFAIISCALTLFAFKNIREMDADKIQHEPKLPMKKSFAAMKGNW
PWILMVLANLIFWIALQQRSTTIVYYLTYNLDRKDLVPLINSLATIQILFIIAIPFFSKYLAKTWIWVGGLLVATFGGVM
MWLAADNITFLIAAWILGNIGSGIACSMPFAMLGFAVDFGAWKTGIKATGILIAFGSTFCIKMGSGLGTALAAWIMNSFG
YVPNHAQSAAGLEGITWAFIWAPALLFALAAIPLLFFRKYEAMEEKIRHDLETINS

Specific function: Responsible for transport of xylose into the cell, with the concomitant uptake of protons (symport system) [H]

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Escherichia coli, GI145693206, Length=455, Percent_Identity=26.8131868131868, Blast_Score=184, Evalue=1e-47,
Organism=Escherichia coli, GI48994989, Length=458, Percent_Identity=28.6026200873362, Blast_Score=181, Evalue=9e-47,
Organism=Escherichia coli, GI1786466, Length=444, Percent_Identity=27.7027027027027, Blast_Score=179, Evalue=4e-46,
Organism=Escherichia coli, GI87082306, Length=448, Percent_Identity=28.5714285714286, Blast_Score=170, Evalue=2e-43,
Organism=Escherichia coli, GI1790561, Length=442, Percent_Identity=27.3755656108597, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI1787902, Length=445, Percent_Identity=25.1685393258427, Blast_Score=126, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 50084; Mature: 49953

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVIEDTQPSGSASLSLLQRISYGSLDVAGNLLYCFGSTYILYFYTDVAGISLAVAGII
CCCCCCCCCCCCHHHHHHHHHHCCCCCCHHCCEEEEECCEEEEEEEHHHHHHHHHHHHHH
LLLARIVDGIDAPIWGIIIDKTRSRYGKCRPWFLWLPLPFAVFSALSFWSPDISITGKAI
HHHHHHHCCCCCCEEEEEEECHHHHCCCCCCEEEEECHHHHHHHHHHHCCCCCEECHHHH
YAAISYMIASILFTGLNTPLSAILPLMTLSPKERLVLNSWRMTGGQIGVLLMNATALPLV
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCHHHHHH
AFLGNGDDHAGFIYTAITFAIISCALTLFAFKNIREMDADKIQHEPKLPMKKSFAAMKGN
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHCCC
WPWILMVLANLIFWIALQQRSTTIVYYLTYNLDRKDLVPLINSLATIQILFIIAIPFFSK
CCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLAKTWIWVGGLLVATFGGVMMWLAADNITFLIAAWILGNIGSGIACSMPFAMLGFAVDF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHCHHHHHHHHHHH
GAWKTGIKATGILIAFGSTFCIKMGSGLGTALAAWIMNSFGYVPNHAQSAAGLEGITWAF
HHHHCCCCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHH
IWAPALLFALAAIPLLFFRKYEAMEEKIRHDLETINS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSVIEDTQPSGSASLSLLQRISYGSLDVAGNLLYCFGSTYILYFYTDVAGISLAVAGII
CCCCCCCCCCCHHHHHHHHHHCCCCCCHHCCEEEEECCEEEEEEEHHHHHHHHHHHHHH
LLLARIVDGIDAPIWGIIIDKTRSRYGKCRPWFLWLPLPFAVFSALSFWSPDISITGKAI
HHHHHHHCCCCCCEEEEEEECHHHHCCCCCCEEEEECHHHHHHHHHHHCCCCCEECHHHH
YAAISYMIASILFTGLNTPLSAILPLMTLSPKERLVLNSWRMTGGQIGVLLMNATALPLV
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCHHHHHH
AFLGNGDDHAGFIYTAITFAIISCALTLFAFKNIREMDADKIQHEPKLPMKKSFAAMKGN
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHCCC
WPWILMVLANLIFWIALQQRSTTIVYYLTYNLDRKDLVPLINSLATIQILFIIAIPFFSK
CCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLAKTWIWVGGLLVATFGGVMMWLAADNITFLIAAWILGNIGSGIACSMPFAMLGFAVDF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHCHHHHHHHHHHH
GAWKTGIKATGILIAFGSTFCIKMGSGLGTALAAWIMNSFGYVPNHAQSAAGLEGITWAF
HHHHCCCCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHH
IWAPALLFALAAIPLLFFRKYEAMEEKIRHDLETINS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9573180 [H]