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The map label for this gene is ptp2 [H]

Identifier: 28379641

GI number: 28379641

Start: 2912856

End: 2913641

Strand: Direct

Name: ptp2 [H]

Synonym: lp_3272

Alternate gene names: 28379641

Gene position: 2912856-2913641 (Clockwise)

Preceding gene: 28379640

Following gene: 28379644

Centisome position: 88.05

GC content: 48.73

Gene sequence:

>786_bases
ATGGAACACAATCGGGTCTTACGACTAGAACACGGCATCAACTTCCGAGAACTGGGGGGTTATGAGAACACCGCTGGTCA
GACAATCAAGTGGCAAAAACTGCTGCGTTGCGGTGGCATGTCACTACTCACTAACCGCGATCTCACCTACTTGGATAACT
ACGGACTCCGTTATGATATCGATCTGCGCCAAGCCAATGAAGCTGAGATGTCTCCAGACCGTTATCCCAAGAATACTAAG
TATATTAATACGTCCGTCTATCCGTTCACTGACAATCGTCGCTTTGATCGCCGTTTAAAACGGCTCATCAAGCGAATGGT
CGTCGATGATTCCTTCAACGCACAAACATACGCGCAAATGATTACAGATAGTCATGCCGTGAAAGTCTGGCAAAATTTAT
TTGCGACCCTCCTCGCCAACGACCAGCCCGACCAATCGGTACTCTTTCACTGTGCTGCTGGTAAAGACCGAACGGGGGTC
GCGGGTGCGCTCATTATGACGGCCCTAGACGTCCCCCGTGAAACGATTATGCAGGACTACCTGCTCACTAACGCCGTCTT
CATGGCCGCAGACAGTATGGATACCGCTACGATCATTACTAAGGCCAATGCTGGTGACCTAGCTAGCCAATTCAACGTTG
CCATGGCTGTTGAAGCCGACAATATGAAGATGGTCTTTCGGGTTTTCGACGACCTCTACGGCAATGGTATTGGTTATTTA
CGAGAAGTGCTTGGGTTATCCGTAGCGGATATTAATAATTTGCGCCAATTGTACTTGAACGACTAA

Upstream 100 bases:

>100_bases
TTTTTAGTATCCAATTCTAATTTTTGCACCCACCTTACCCTGACACCGGCAATGAAAGCGGTTATAATAAAGCTAAATCA
CTAATCGAGGTAATCAGACT

Downstream 100 bases:

>100_bases
GGAACACTAAAAAAACTGGTTTTGAAAGTCAATAACTTTTCAAAATCAGTTTTTTTTGCATCATCTATTTAATTGTTTAA
TTATAAAATTGGTGATAACA

Product: protein-tyrosine phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MEHNRVLRLEHGINFRELGGYENTAGQTIKWQKLLRCGGMSLLTNRDLTYLDNYGLRYDIDLRQANEAEMSPDRYPKNTK
YINTSVYPFTDNRRFDRRLKRLIKRMVVDDSFNAQTYAQMITDSHAVKVWQNLFATLLANDQPDQSVLFHCAAGKDRTGV
AGALIMTALDVPRETIMQDYLLTNAVFMAADSMDTATIITKANAGDLASQFNVAMAVEADNMKMVFRVFDDLYGNGIGYL
REVLGLSVADINNLRQLYLND

Sequences:

>Translated_261_residues
MEHNRVLRLEHGINFRELGGYENTAGQTIKWQKLLRCGGMSLLTNRDLTYLDNYGLRYDIDLRQANEAEMSPDRYPKNTK
YINTSVYPFTDNRRFDRRLKRLIKRMVVDDSFNAQTYAQMITDSHAVKVWQNLFATLLANDQPDQSVLFHCAAGKDRTGV
AGALIMTALDVPRETIMQDYLLTNAVFMAADSMDTATIITKANAGDLASQFNVAMAVEADNMKMVFRVFDDLYGNGIGYL
REVLGLSVADINNLRQLYLND
>Mature_261_residues
MEHNRVLRLEHGINFRELGGYENTAGQTIKWQKLLRCGGMSLLTNRDLTYLDNYGLRYDIDLRQANEAEMSPDRYPKNTK
YINTSVYPFTDNRRFDRRLKRLIKRMVVDDSFNAQTYAQMITDSHAVKVWQNLFATLLANDQPDQSVLFHCAAGKDRTGV
AGALIMTALDVPRETIMQDYLLTNAVFMAADSMDTATIITKANAGDLASQFNVAMAVEADNMKMVFRVFDDLYGNGIGYL
REVLGLSVADINNLRQLYLND

Specific function: Unknown

COG id: COG2365

COG function: function code T; Protein tyrosine/serine phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the protein-tyrosine phosphatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000387
- InterPro:   IPR016130 [H]

Pfam domain/function: NA

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 29675; Mature: 29675

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS01109 RIBOSOMAL_L10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHNRVLRLEHGINFRELGGYENTAGQTIKWQKLLRCGGMSLLTNRDLTYLDNYGLRYDI
CCCCEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCEECCCCCEEEECCCCEEEE
DLRQANEAEMSPDRYPKNTKYINTSVYPFTDNRRFDRRLKRLIKRMVVDDSFNAQTYAQM
ECCCCCCCCCCCCCCCCCCEEEECEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
ITDSHAVKVWQNLFATLLANDQPDQSVLFHCAAGKDRTGVAGALIMTALDVPRETIMQDY
HHCHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHH
LLTNAVFMAADSMDTATIITKANAGDLASQFNVAMAVEADNMKMVFRVFDDLYGNGIGYL
HHHHHHHEEECCCCCEEEEEECCCCCHHHHCCEEEEEECCCHHHHHHHHHHHHCCCHHHH
REVLGLSVADINNLRQLYLND
HHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEHNRVLRLEHGINFRELGGYENTAGQTIKWQKLLRCGGMSLLTNRDLTYLDNYGLRYDI
CCCCEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCEECCCCCEEEECCCCEEEE
DLRQANEAEMSPDRYPKNTKYINTSVYPFTDNRRFDRRLKRLIKRMVVDDSFNAQTYAQM
ECCCCCCCCCCCCCCCCCCEEEECEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
ITDSHAVKVWQNLFATLLANDQPDQSVLFHCAAGKDRTGVAGALIMTALDVPRETIMQDY
HHCHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHH
LLTNAVFMAADSMDTATIITKANAGDLASQFNVAMAVEADNMKMVFRVFDDLYGNGIGYL
HHHHHHHEEECCCCCEEEEEECCCCCHHHHCCEEEEEECCCHHHHHHHHHHHHCCCHHHH
REVLGLSVADINNLRQLYLND
HHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7681825; 2536677 [H]