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The map label for this gene is 28379116

Identifier: 28379116

GI number: 28379116

Start: 2305971

End: 2307683

Strand: Direct

Name: 28379116

Synonym: lp_2588

Alternate gene names: NA

Gene position: 2305971-2307683 (Clockwise)

Preceding gene: 28379115

Following gene: 28379119

Centisome position: 69.7

GC content: 50.5

Gene sequence:

>1713_bases
ATGCGCAAAAAATGGCGATGGTTATTATTAGCACTCACTGGAATTTTCTTTTTGATGTTCGGGCCACCCTTAGTTAGTCA
GGCCCGCAACGTAATTGAAGCAACGGGCAACGATGTTAATAGTGCGGTTATCAAAGATAGTAAGGGCAAGATAATGGCTC
ACGATGCACAATTGCCAGAAGACCAAGAATACACAGTCAATTACAACTGGCGCATCCCTGATAACCTCAAGATCAAGGCG
GGCGACACGATGGCTTTCCAAGTCCCCGAAAACGTTCGTATTCCGCATGACGAGGCTTTTCCAATGAAAGGAACCACTGC
AGGTACCATCGGAACCTTCTTCATTGCTGCCGGCGCACATACGGGTCTCGTCACATTTAATCAGGCCTATCAAACCAGAC
CACGTAATCGGAAAGGGTTTGTTCAGTTGGACGCCTTCGGAACCGTTCCTAGTCATCCTGGTAACTTAGCCCCAATTTTA
TTAGAGAAATCAGCTGAATGGGCTGACGAAGCTAATCCACGGCGGATCAACTGGACAATTCGTGTCTTGCCTAATAACAA
TCAGCTCGTCGATCCCACCTTTGTTGATACGTTGAGTCCGAACCAAACGTATGTCAATGGCAGCGCCGTCCTACGCGATG
AGACAGGTAATATTATTCCCGTCAATACGAGCGTGAATGGTAATCAATTGACGTTTAATGCCACAGGGTCGTTTACGTCA
GAGTTAGCTTTGACCTACCAAACTAAGACTAACGAACCCACTGGCGACGCAACTTTTGAAAATAATGTCACCTATACTGA
CAAGAACGGCAACAAGGGATCCGCGACAGCCACGATTTCACGGCCAGTCACCGAACCAGACGTTCCCGAAAATCCAGGTA
TTTCGGAACCAACAGATCCCGATGAAGATGAGGAACCAGGAGTTACTGAACCGGAAAAACCTGGGACTACCGAACCCGAG
AAACCCGGAGTCACCGAACCAGAGAAACCTGGGACTACCGAACCCGAGAAACCCGGAGTCACCGAACCAGAAAAACCTGG
GACTACTGAACCGGAGAAACCCGGAGTCACCGAACCAGAAAAACCTGGGACTACCGAACCCGAGAAACCCGGAGTCACCG
AACCAGAGAAACCTGGGACTACCGAACCCGAGAAACCCGGGGTCACCGAACCAGAAAAACCTGGGACTACTGAACCGGAG
AAACCCGGGGTCACTGAACCAGAAAAACCTGGGACTACTGAACCGGAGAAACCCGGGGTCACTGAACCAGAAAAACCTGG
GACTACTGAACCGGAGAAACCCGGAATCACTGAACCAGAAAAGCCGGGTACCGTCTCACCAGAACAGCCGAGTGGTCCTA
AGCCCACCAATCCAGGAACCGTAACACCTGAAAAACCAACGGCCGTCACTCCAGCCGTTCCAAATGAGTCGTCTCCATCG
ACCCCCGAACCAAGCGTCAGTGGTAATCTGTCAGCACCTGCCAATCCAGCGACAAATTCGACTAACACGACCGCCACAAC
GGTTCCGGCAACTAATCCCTTACCAGCATCGGCAGCTACAGCTTTTGCAGGCTCAGCACCGATGAATAAGTCGTTGCCAC
AAACTAACGAACACTCGGCAAGTTGGTCAGTAGCTATCGGTCTCGCCTTATTGATTGGATTACTCGGTAGCGCTTTTGTC
CTGACACGCCGAACTAAGCATCGGCATTCATAA

Upstream 100 bases:

>100_bases
GGCCGCATACCGTTAGTTAAGCTAGCAAACGGTGTTTTGTCAGCGATTTTTATGTACAACGGTGGTAATGTATGGGTATA
TCTTAATGGAGGCGATTACC

Downstream 100 bases:

>100_bases
TTAGCTTGTCACACCGTCAAAAAAATGAGCTGCTCACGTCGCGTTGAACTGACGATCAACGGTGTGAGTAGCTCATTTTT
TATAATTTCAACTTGCTGCT

Product: cell surface protein precursor

Products: NA

Alternate protein names: Outer Membrane Protein

Number of amino acids: Translated: 570; Mature: 570

Protein sequence:

>570_residues
MRKKWRWLLLALTGIFFLMFGPPLVSQARNVIEATGNDVNSAVIKDSKGKIMAHDAQLPEDQEYTVNYNWRIPDNLKIKA
GDTMAFQVPENVRIPHDEAFPMKGTTAGTIGTFFIAAGAHTGLVTFNQAYQTRPRNRKGFVQLDAFGTVPSHPGNLAPIL
LEKSAEWADEANPRRINWTIRVLPNNNQLVDPTFVDTLSPNQTYVNGSAVLRDETGNIIPVNTSVNGNQLTFNATGSFTS
ELALTYQTKTNEPTGDATFENNVTYTDKNGNKGSATATISRPVTEPDVPENPGISEPTDPDEDEEPGVTEPEKPGTTEPE
KPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPE
KPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPEKPGITEPEKPGTVSPEQPSGPKPTNPGTVTPEKPTAVTPAVPNESSPS
TPEPSVSGNLSAPANPATNSTNTTATTVPATNPLPASAATAFAGSAPMNKSLPQTNEHSASWSVAIGLALLIGLLGSAFV
LTRRTKHRHS

Sequences:

>Translated_570_residues
MRKKWRWLLLALTGIFFLMFGPPLVSQARNVIEATGNDVNSAVIKDSKGKIMAHDAQLPEDQEYTVNYNWRIPDNLKIKA
GDTMAFQVPENVRIPHDEAFPMKGTTAGTIGTFFIAAGAHTGLVTFNQAYQTRPRNRKGFVQLDAFGTVPSHPGNLAPIL
LEKSAEWADEANPRRINWTIRVLPNNNQLVDPTFVDTLSPNQTYVNGSAVLRDETGNIIPVNTSVNGNQLTFNATGSFTS
ELALTYQTKTNEPTGDATFENNVTYTDKNGNKGSATATISRPVTEPDVPENPGISEPTDPDEDEEPGVTEPEKPGTTEPE
KPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPE
KPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPEKPGITEPEKPGTVSPEQPSGPKPTNPGTVTPEKPTAVTPAVPNESSPS
TPEPSVSGNLSAPANPATNSTNTTATTVPATNPLPASAATAFAGSAPMNKSLPQTNEHSASWSVAIGLALLIGLLGSAFV
LTRRTKHRHS
>Mature_570_residues
MRKKWRWLLLALTGIFFLMFGPPLVSQARNVIEATGNDVNSAVIKDSKGKIMAHDAQLPEDQEYTVNYNWRIPDNLKIKA
GDTMAFQVPENVRIPHDEAFPMKGTTAGTIGTFFIAAGAHTGLVTFNQAYQTRPRNRKGFVQLDAFGTVPSHPGNLAPIL
LEKSAEWADEANPRRINWTIRVLPNNNQLVDPTFVDTLSPNQTYVNGSAVLRDETGNIIPVNTSVNGNQLTFNATGSFTS
ELALTYQTKTNEPTGDATFENNVTYTDKNGNKGSATATISRPVTEPDVPENPGISEPTDPDEDEEPGVTEPEKPGTTEPE
KPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPE
KPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPEKPGITEPEKPGTVSPEQPSGPKPTNPGTVTPEKPTAVTPAVPNESSPS
TPEPSVSGNLSAPANPATNSTNTTATTVPATNPLPASAATAFAGSAPMNKSLPQTNEHSASWSVAIGLALLIGLLGSAFV
LTRRTKHRHS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI193203538, Length=228, Percent_Identity=35.0877192982456, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60676; Mature: 60676

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS50847 GRAM_POS_ANCHORING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKWRWLLLALTGIFFLMFGPPLVSQARNVIEATGNDVNSAVIKDSKGKIMAHDAQLPE
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCCCCC
DQEYTVNYNWRIPDNLKIKAGDTMAFQVPENVRIPHDEAFPMKGTTAGTIGTFFIAAGAH
CCCEEEEEEEECCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCHHEEEEEECCCC
TGLVTFNQAYQTRPRNRKGFVQLDAFGTVPSHPGNLAPILLEKSAEWADEANPRRINWTI
CCEEEECHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCHHHCCCCEEEEEEE
RVLPNNNQLVDPTFVDTLSPNQTYVNGSAVLRDETGNIIPVNTSVNGNQLTFNATGSFTS
EEECCCCCEECCHHHCCCCCCCEEECCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCE
ELALTYQTKTNEPTGDATFENNVTYTDKNGNKGSATATISRPVTEPDVPENPGISEPTDP
EEEEEEEECCCCCCCCCEECCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
DEDEEPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPEKPGVTEPE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KPGTTEPEKPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPEKPGV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TEPEKPGTTEPEKPGITEPEKPGTVSPEQPSGPKPTNPGTVTPEKPTAVTPAVPNESSPS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
TPEPSVSGNLSAPANPATNSTNTTATTVPATNPLPASAATAFAGSAPMNKSLPQTNEHSA
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
SWSVAIGLALLIGLLGSAFVLTRRTKHRHS
CHHHHHHHHHHHHHHHHHEEEHHHHHHCCC
>Mature Secondary Structure
MRKKWRWLLLALTGIFFLMFGPPLVSQARNVIEATGNDVNSAVIKDSKGKIMAHDAQLPE
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCCCCC
DQEYTVNYNWRIPDNLKIKAGDTMAFQVPENVRIPHDEAFPMKGTTAGTIGTFFIAAGAH
CCCEEEEEEEECCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCHHEEEEEECCCC
TGLVTFNQAYQTRPRNRKGFVQLDAFGTVPSHPGNLAPILLEKSAEWADEANPRRINWTI
CCEEEECHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCHHHCCCCEEEEEEE
RVLPNNNQLVDPTFVDTLSPNQTYVNGSAVLRDETGNIIPVNTSVNGNQLTFNATGSFTS
EEECCCCCEECCHHHCCCCCCCEEECCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCE
ELALTYQTKTNEPTGDATFENNVTYTDKNGNKGSATATISRPVTEPDVPENPGISEPTDP
EEEEEEEECCCCCCCCCEECCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
DEDEEPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPEKPGVTEPE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KPGTTEPEKPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPEKPGVTEPEKPGTTEPEKPGV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TEPEKPGTTEPEKPGITEPEKPGTVSPEQPSGPKPTNPGTVTPEKPTAVTPAVPNESSPS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
TPEPSVSGNLSAPANPATNSTNTTATTVPATNPLPASAATAFAGSAPMNKSLPQTNEHSA
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
SWSVAIGLALLIGLLGSAFVLTRRTKHRHS
CHHHHHHHHHHHHHHHHHEEEHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA