| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28379115
Identifier: 28379115
GI number: 28379115
Start: 2304934
End: 2305698
Strand: Direct
Name: 28379115
Synonym: lp_2586
Alternate gene names: NA
Gene position: 2304934-2305698 (Clockwise)
Preceding gene: 28379112
Following gene: 28379116
Centisome position: 69.67
GC content: 49.54
Gene sequence:
>765_bases GTGATGCGACGAATTAAAATTATTAAAATCATGGCCATTATTAGTGCGACCCTGGTCGTAGGGATTGGATCCTATTGGCA ACATCGCTTGACCCCATTACGAAAAACGCGGGTCGCCCAAACGAGTATTCCGACCATCTTCGTCGGTGGCGATTACGCGC GCGCATTTTCTACCGACGGCTTTGTGCACCGCTTAACCGCGGCACACCTGATGACGAAAGGATTGGTCGTCCATGTTAGT CACGCCGGCCACGTGACTGTCCAACAGTTCGGACCACTAAAAAACAACCCAACGATTCAGGTTATCTTTGCCGATAATCA TCATGCGAAACGTCAAGCTCGGCAGTTTGCTACTGTCATGCAAGGGCTCGCAAAACGCTACCACGTGACCCGCTACAATG CTGTCGGTCACTCATCTGGAGGTAATATCATCTTTGATTATCTGACAGCGCAAGTCCCCCAGCGCGCACAAATCAATAAG TTTGTGACCATTGGCTCGACCTATCCGGGCTTGACCACTCAGCAGTTAAACCGGTTACCACGGTCCTTGCCGATATTGAA TATTGCCGGCCATGTTTGGCATACAAGTGGTGATGGCGGCGTCAATTTACAAGCCGTACTTAAATTCAGCCATCAATTAT TGGCAGCTGGTTGGTCACCAAAAACCCAAATCATTCACGGTAGTCCCCTGACCGCCAGCCACTCAATGTTGCATATCAAT CCACAGGTCGACTTACTCATCATCCAGTTCTTGTACGGCAACTGA
Upstream 100 bases:
>100_bases TGTAGACTTATTGCTTCTCATTCTAGTGGATTCGGCGAAGGTTTGCAAAAGCAATTTTTACTAATTCGACTATAATAGGA TTCAAAGGCGAGGTGGATCA
Downstream 100 bases:
>100_bases TCAATTCATCGAGGCGTGCTGCCAATCAACCTGAAGCACGCCACACTTCTAATTTAACAGGATTCGGACACCCTTACGTC CCTTGGATGGGATGGCAAAT
Product: cell surface hydrolase, membrane-bound (putative)
Products: NA
Alternate protein names: Cell Surface Hydrolase Membrane-Bound; Lipase/Esterase; Secreted Protein
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MMRRIKIIKIMAIISATLVVGIGSYWQHRLTPLRKTRVAQTSIPTIFVGGDYARAFSTDGFVHRLTAAHLMTKGLVVHVS HAGHVTVQQFGPLKNNPTIQVIFADNHHAKRQARQFATVMQGLAKRYHVTRYNAVGHSSGGNIIFDYLTAQVPQRAQINK FVTIGSTYPGLTTQQLNRLPRSLPILNIAGHVWHTSGDGGVNLQAVLKFSHQLLAAGWSPKTQIIHGSPLTASHSMLHIN PQVDLLIIQFLYGN
Sequences:
>Translated_254_residues MMRRIKIIKIMAIISATLVVGIGSYWQHRLTPLRKTRVAQTSIPTIFVGGDYARAFSTDGFVHRLTAAHLMTKGLVVHVS HAGHVTVQQFGPLKNNPTIQVIFADNHHAKRQARQFATVMQGLAKRYHVTRYNAVGHSSGGNIIFDYLTAQVPQRAQINK FVTIGSTYPGLTTQQLNRLPRSLPILNIAGHVWHTSGDGGVNLQAVLKFSHQLLAAGWSPKTQIIHGSPLTASHSMLHIN PQVDLLIIQFLYGN >Mature_254_residues MMRRIKIIKIMAIISATLVVGIGSYWQHRLTPLRKTRVAQTSIPTIFVGGDYARAFSTDGFVHRLTAAHLMTKGLVVHVS HAGHVTVQQFGPLKNNPTIQVIFADNHHAKRQARQFATVMQGLAKRYHVTRYNAVGHSSGGNIIFDYLTAQVPQRAQINK FVTIGSTYPGLTTQQLNRLPRSLPILNIAGHVWHTSGDGGVNLQAVLKFSHQLLAAGWSPKTQIIHGSPLTASHSMLHIN PQVDLLIIQFLYGN
Specific function: Unknown
COG id: COG4814
COG function: function code R; Uncharacterized protein with an alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28055; Mature: 28055
Theoretical pI: Translated: 11.60; Mature: 11.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRRIKIIKIMAIISATLVVGIGSYWQHRLTPLRKTRVAQTSIPTIFVGGDYARAFSTDG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCHHHHCCCC FVHRLTAAHLMTKGLVVHVSHAGHVTVQQFGPLKNNPTIQVIFADNHHAKRQARQFATVM HHHHHHHHHHHHCCEEEEEECCCEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH QGLAKRYHVTRYNAVGHSSGGNIIFDYLTAQVPQRAQINKFVTIGSTYPGLTTQQLNRLP HHHHHHHEEEEECCCCCCCCCCEEEEEHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHCH RSLPILNIAGHVWHTSGDGGVNLQAVLKFSHQLLAAGWSPKTQIIHGSPLTASHSMLHIN HHCCEEEECCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEC PQVDLLIIQFLYGN CCEEEEEEEEECCC >Mature Secondary Structure MMRRIKIIKIMAIISATLVVGIGSYWQHRLTPLRKTRVAQTSIPTIFVGGDYARAFSTDG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCHHHHCCCC FVHRLTAAHLMTKGLVVHVSHAGHVTVQQFGPLKNNPTIQVIFADNHHAKRQARQFATVM HHHHHHHHHHHHCCEEEEEECCCEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH QGLAKRYHVTRYNAVGHSSGGNIIFDYLTAQVPQRAQINKFVTIGSTYPGLTTQQLNRLP HHHHHHHEEEEECCCCCCCCCCEEEEEHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHCH RSLPILNIAGHVWHTSGDGGVNLQAVLKFSHQLLAAGWSPKTQIIHGSPLTASHSMLHIN HHCCEEEECCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEC PQVDLLIIQFLYGN CCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA