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The map label for this gene is 28379018

Identifier: 28379018

GI number: 28379018

Start: 2202699

End: 2203820

Strand: Direct

Name: 28379018

Synonym: lp_2455

Alternate gene names: NA

Gene position: 2202699-2203820 (Clockwise)

Preceding gene: 28379017

Following gene: 28379037

Centisome position: 66.58

GC content: 42.69

Gene sequence:

>1122_bases
ATGTCAGTAACCAAACTTAATAATGGTAAATGGCAAGCCCGTGTCTCTTATAAAGATGATGACGGTAACTATAAGTCGGT
TACTCATTTAGAAAAGCGCAAAACTGACGCTGTTGAGTGGGAAACTAAGACTAAGAATGCTCTGTTGGAAGGTGCTGACT
TATCACGTAGCACTGAGAGTCTAAAGCACTACTTTCTTGATTGGATCAGAATATATAAGACTGATGGTGTATCGCGTCAT
ACTCACGAGCTATATATGGGCAACTGGCGTCACATCGCTGCATATTTTAAAGATCGACCTATGAGCGCAATTAAACGTCC
AGATTACCAGAAGTTTCTGAATGAATTTGGCCGCAGTCATGGAATTGCCACATCTCACAAGCTTCATCAACAAGTACACA
CTGCAATCAAGGACGCCGTAGCTGATGGTATTCTAAAACGAGACTTTGCTTACAAGGCACACGTCACTGGGCGCCCTCCT
AAGCCCGTAGAGGAAAAGTATTTGACGTTGTCCGATTATAAGAAGCTGCGTAAATACCTCATTAAAACGGCTGATTATGA
CCACATGACTATGCTGATGATGCTGTTTCAACTAGAAACTGGAACCAGGTTCGAGGAAGCTGCTGGTCTGACGTGGGATA
ATTTGGATTTGAATAATGGAATAGTTCACATTAAACAGCAGTGGGACGCCCGTAGACAGACTTTTCGTCCCACTAAGGGA
AATGGACAAGCCGATGGAGATATAACCATAGGACCCGCCTACTGTCGTTTTATGAGGAGCTATCGTAGCACGCAGAAAGA
TTATTTAGAATTGCACGAAATGAAGAATCCTAAGAACCTCGTATTTTGGTCTAAACTAGGAAAAATCGTGGGCAATGGGA
ATGCAAACGAAGAGCTAGGACGTATTTGTAACCGTCTAAAGATCAACAAAGTTACAACACACGCCATGAGGCACACACAC
GCTTCGATTCTTATCTTAAATCATGAGTCCCTTCCCTATGTTCAACATCGCCTTCGACATCAAAAACTAGAAACGACCGT
TAACACCTACGTCCATCTTATTGAAGAAGAAAACGGCGTGTCAGATAAGAAGGCTACCGAGCTAATGGACGAAGGATTTT
AA

Upstream 100 bases:

>100_bases
CACCACTAGCCTGATAATCCAGGCTTTTATTTAAAAACAAAAAAGAACATATGTTTGGGAATGTCAACCTATTGTTATTT
CCAGTTGGGAGGAATAAAAC

Downstream 100 bases:

>100_bases
AAATGATAATTTTATGATTGCCGTAGTCCTTGTGCCGCAAGGGATTACAAAATCATTTGTTGATTTTTCTTCCAAAAACT
GCTATATTTTGACTACTTTT

Product: prophage Lp2 protein 2, integrase

Products: NA

Alternate protein names: Phage Integrase; Integrase Family Protein; DNA Integration/Recombination/Inversion Protein; Prophage Lp2 Integrase; Phage Integrase Family Protein; DNA Integration/Recombination/Invertion Protein; Phage Integrase Family Site Specific Recombinase; Phage-Related Integrase; Prophage; Integrase/Recombinase Ripx; Bacteriophage Integrase; Integrase/Recombinase; Integrase Protein; Tyrosine Recombinase XerC; Site-Specific Recombinase XerD; Phage Family Integrase; Phage Integrase Family Integrase/Recombinase; Transposon Integrase; Tyrosine Recombinase XerD; Integrase Phage-Related Protein; Phage Integrase Family Site-Specific Recombinase; Phage-Related Integrase Recombinase

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MSVTKLNNGKWQARVSYKDDDGNYKSVTHLEKRKTDAVEWETKTKNALLEGADLSRSTESLKHYFLDWIRIYKTDGVSRH
THELYMGNWRHIAAYFKDRPMSAIKRPDYQKFLNEFGRSHGIATSHKLHQQVHTAIKDAVADGILKRDFAYKAHVTGRPP
KPVEEKYLTLSDYKKLRKYLIKTADYDHMTMLMMLFQLETGTRFEEAAGLTWDNLDLNNGIVHIKQQWDARRQTFRPTKG
NGQADGDITIGPAYCRFMRSYRSTQKDYLELHEMKNPKNLVFWSKLGKIVGNGNANEELGRICNRLKINKVTTHAMRHTH
ASILILNHESLPYVQHRLRHQKLETTVNTYVHLIEEENGVSDKKATELMDEGF

Sequences:

>Translated_373_residues
MSVTKLNNGKWQARVSYKDDDGNYKSVTHLEKRKTDAVEWETKTKNALLEGADLSRSTESLKHYFLDWIRIYKTDGVSRH
THELYMGNWRHIAAYFKDRPMSAIKRPDYQKFLNEFGRSHGIATSHKLHQQVHTAIKDAVADGILKRDFAYKAHVTGRPP
KPVEEKYLTLSDYKKLRKYLIKTADYDHMTMLMMLFQLETGTRFEEAAGLTWDNLDLNNGIVHIKQQWDARRQTFRPTKG
NGQADGDITIGPAYCRFMRSYRSTQKDYLELHEMKNPKNLVFWSKLGKIVGNGNANEELGRICNRLKINKVTTHAMRHTH
ASILILNHESLPYVQHRLRHQKLETTVNTYVHLIEEENGVSDKKATELMDEGF
>Mature_372_residues
SVTKLNNGKWQARVSYKDDDGNYKSVTHLEKRKTDAVEWETKTKNALLEGADLSRSTESLKHYFLDWIRIYKTDGVSRHT
HELYMGNWRHIAAYFKDRPMSAIKRPDYQKFLNEFGRSHGIATSHKLHQQVHTAIKDAVADGILKRDFAYKAHVTGRPPK
PVEEKYLTLSDYKKLRKYLIKTADYDHMTMLMMLFQLETGTRFEEAAGLTWDNLDLNNGIVHIKQQWDARRQTFRPTKGN
GQADGDITIGPAYCRFMRSYRSTQKDYLELHEMKNPKNLVFWSKLGKIVGNGNANEELGRICNRLKINKVTTHAMRHTHA
SILILNHESLPYVQHRLRHQKLETTVNTYVHLIEEENGVSDKKATELMDEGF

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43423; Mature: 43292

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTKLNNGKWQARVSYKDDDGNYKSVTHLEKRKTDAVEWETKTKNALLEGADLSRSTES
CCCEECCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHH
LKHYFLDWIRIYKTDGVSRHTHELYMGNWRHIAAYFKDRPMSAIKRPDYQKFLNEFGRSH
HHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHC
GIATSHKLHQQVHTAIKDAVADGILKRDFAYKAHVTGRPPKPVEEKYLTLSDYKKLRKYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCCHHHHHHHHHHH
IKTADYDHMTMLMMLFQLETGTRFEEAAGLTWDNLDLNNGIVHIKQQWDARRQTFRPTKG
HHCCCCHHHHHHHHHHHHCCCCCHHHHCCCEECCCCCCCCEEEEHHHHHHHHHHCCCCCC
NGQADGDITIGPAYCRFMRSYRSTQKDYLELHEMKNPKNLVFWSKLGKIVGNGNANEELG
CCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCHHHHH
RICNRLKINKVTTHAMRHTHASILILNHESLPYVQHRLRHQKLETTVNTYVHLIEEENGV
HHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCC
SDKKATELMDEGF
CHHHHHHHHHCCC
>Mature Secondary Structure 
SVTKLNNGKWQARVSYKDDDGNYKSVTHLEKRKTDAVEWETKTKNALLEGADLSRSTES
CCEECCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHH
LKHYFLDWIRIYKTDGVSRHTHELYMGNWRHIAAYFKDRPMSAIKRPDYQKFLNEFGRSH
HHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHC
GIATSHKLHQQVHTAIKDAVADGILKRDFAYKAHVTGRPPKPVEEKYLTLSDYKKLRKYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCCHHHHHHHHHHH
IKTADYDHMTMLMMLFQLETGTRFEEAAGLTWDNLDLNNGIVHIKQQWDARRQTFRPTKG
HHCCCCHHHHHHHHHHHHCCCCCHHHHCCCEECCCCCCCCEEEEHHHHHHHHHHCCCCCC
NGQADGDITIGPAYCRFMRSYRSTQKDYLELHEMKNPKNLVFWSKLGKIVGNGNANEELG
CCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCHHHHH
RICNRLKINKVTTHAMRHTHASILILNHESLPYVQHRLRHQKLETTVNTYVHLIEEENGV
HHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCC
SDKKATELMDEGF
CHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA