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The map label for this gene is 28379037

Identifier: 28379037

GI number: 28379037

Start: 2216566

End: 2217132

Strand: Direct

Name: 28379037

Synonym: lp_2479

Alternate gene names: NA

Gene position: 2216566-2217132 (Clockwise)

Preceding gene: 28379018

Following gene: 28379038

Centisome position: 67.0

GC content: 30.16

Gene sequence:

>567_bases
ATGAATAAAATAAAAGAACTACGTCAATATATGGGGCTTTCACAAGCAGAACTTGCTGAAAAATTGAATGTAACTCGGCA
ATCTATAAGCCTATATGAAAAAGGTCAAAGAGTTCCACGTATTAATGTTTTGAAGAATATGGAAGCCATTTTTGGCGTGC
CGATAAGTTATATTCAAGGCCAGACGACGTATTTATCACCTATAGATAAGGCTAATCTTGTTTCACAAAAAATTAAATTT
GGAAAAGATGAGCAACTCTCTGTACTAACCCAAGTTCTTGATGATTCAAAAAAAGATGACGTTCAAAAACTAAAGAAACA
ACTTAACGATCTTGACAAAATTATTGATACCCTTTCTGACACTACAATTAAAAGCTTATATACATCAGTTAATTTTTTGC
TTGAGCTAGATCAGTCTGATGACTCACTACTACAGCAAGCATATTTTTCTCTAATTTCAAAATTAGAACTAGCTTTGAAT
TCAAAAACAGAAATATCAAGAAAATTTGCAGAGCATATATTTAAAGATTTTTTTAATCGTTTGAAAGAATTTAGCTATAA
AAAATAA

Upstream 100 bases:

>100_bases
ACAAAATATATTATACGCAACTTTACGTTGCAGTCAACAAAAAGTTGCACTATGTTACTAAAAACTGTAAAATATTCCTG
TATTAGGAAGTGATTAGACA

Downstream 100 bases:

>100_bases
TTTTCCATACATAACACTGCCCCCGCACGGTACGTTATGGAGGAAATTATAAATGGCAACAATCAAGAAGTATCAGGACA
AGGACGGGAATACCCGTTAT

Product: prophage Lp3 protein 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MNKIKELRQYMGLSQAELAEKLNVTRQSISLYEKGQRVPRINVLKNMEAIFGVPISYIQGQTTYLSPIDKANLVSQKIKF
GKDEQLSVLTQVLDDSKKDDVQKLKKQLNDLDKIIDTLSDTTIKSLYTSVNFLLELDQSDDSLLQQAYFSLISKLELALN
SKTEISRKFAEHIFKDFFNRLKEFSYKK

Sequences:

>Translated_188_residues
MNKIKELRQYMGLSQAELAEKLNVTRQSISLYEKGQRVPRINVLKNMEAIFGVPISYIQGQTTYLSPIDKANLVSQKIKF
GKDEQLSVLTQVLDDSKKDDVQKLKKQLNDLDKIIDTLSDTTIKSLYTSVNFLLELDQSDDSLLQQAYFSLISKLELALN
SKTEISRKFAEHIFKDFFNRLKEFSYKK
>Mature_188_residues
MNKIKELRQYMGLSQAELAEKLNVTRQSISLYEKGQRVPRINVLKNMEAIFGVPISYIQGQTTYLSPIDKANLVSQKIKF
GKDEQLSVLTQVLDDSKKDDVQKLKKQLNDLDKIIDTLSDTTIKSLYTSVNFLLELDQSDDSLLQQAYFSLISKLELALN
SKTEISRKFAEHIFKDFFNRLKEFSYKK

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21723; Mature: 21723

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIKELRQYMGLSQAELAEKLNVTRQSISLYEKGQRVPRINVLKNMEAIFGVPISYIQG
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHCC
QTTYLSPIDKANLVSQKIKFGKDEQLSVLTQVLDDSKKDDVQKLKKQLNDLDKIIDTLSD
CCHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
TTIKSLYTSVNFLLELDQSDDSLLQQAYFSLISKLELALNSKTEISRKFAEHIFKDFFNR
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LKEFSYKK
HHHHCCCC
>Mature Secondary Structure
MNKIKELRQYMGLSQAELAEKLNVTRQSISLYEKGQRVPRINVLKNMEAIFGVPISYIQG
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHCC
QTTYLSPIDKANLVSQKIKFGKDEQLSVLTQVLDDSKKDDVQKLKKQLNDLDKIIDTLSD
CCHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
TTIKSLYTSVNFLLELDQSDDSLLQQAYFSLISKLELALNSKTEISRKFAEHIFKDFFNR
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LKEFSYKK
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA