| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28379017
Identifier: 28379017
GI number: 28379017
Start: 2201698
End: 2202612
Strand: Direct
Name: 28379017
Synonym: lp_2454
Alternate gene names: NA
Gene position: 2201698-2202612 (Clockwise)
Preceding gene: 28379016
Following gene: 28379018
Centisome position: 66.55
GC content: 33.22
Gene sequence:
>915_bases ATGCCACAAACTTCTTCTGTTTTTCGATACCCAGGTGGAAAAACTCAACTATATTCATTTGTGCACCATTTGCTAAAAAT AAATAGCATTACTGACATTTCACTTGAACCGTTTGCAGGTGGCGCTGGGATTCCACTAAAATTATTAATAGACAATCGAA TAAACACCGTCTGGATAAATGATTATGACAAAGCAATTTACTCAGTTTGGGACACAATTTTGAACGATCCTGTTGCTTTA ATTTCTTTAATAGAATCAGTTCCCTTTGATTACCATTCCGGTCATAAAATTAGTCCAGAATTCAGTATTAGTTTCTGGAA AAAACAGAAAGACATTTATTTAAATAATAAAAACCATCAACACTCAATCGAATTAGCATTTTCCACTCTATTTTTAAATA GGACTAATACTAGTGGCATTATCACTGCAGGACCATTAGGTGGATTCAAGCAAAATAGGAAGACACAAATATACGCGCGC TTCAATAAGGAAACTCTTATTAACAAAATTAATTTAATACACTCTTTTAAATCACAAATTAAATTGACTAGATTAAACAC ACTGGATATGATCCCAAAAATCCGTAATTCCGTGGACCCTAAAAATAGTTTTATTTTTTTTGATCCTCCCTACTTTGAGC AAGGTAAAGAATTATACTACTCATCGTTTAATGAACAGGGTCATAAGGAATTAGCAAATGGTATTTTATCTCTAAAGCAA TACCATTGGATTACAACATACGATACAGCGCCTCAAATACAAGAGGACTATACAATGGCCAAACAAAAATATGAATATTC ACTGAACTATTCCGCCAATAATAAAAATCGTGGTAAAACTGCAGAGTTCATGTTTGCTAGTCCAGTAACAAGATTGAGTT CCTTTGAAAAAGTCGATTTAACACCACTAGCCTGA
Upstream 100 bases:
>100_bases AGATTTTAGTGAGTTTCGAAAAGGATCTAAAGGCAATGCGCTATTAATTTCTGACCATCTTATTTTCAACATGCTATTAT TTGTTTACGAGGTGATTAAA
Downstream 100 bases:
>100_bases TAATCCAGGCTTTTATTTAAAAACAAAAAAGAACATATGTTTGGGAATGTCAACCTATTGTTATTTCCAGTTGGGAGGAA TAAAACATGTCAGTAACCAA
Product: prophage Lp2 protein 3
Products: NA
Alternate protein names: DNA-Methyltransferase; DNA Methyltransferase; Cytosine-Specific DNA Methyltransferase; Adenine-Specific DNA Methyltransferase; Site-Specific DNA Methylase; Site-Specific DNA-Methyltransferase; DNA Adenine Methylase; Prophage DNA Adenine Methylase; N6 Adenine-Specific DNA Methyltransferase
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MPQTSSVFRYPGGKTQLYSFVHHLLKINSITDISLEPFAGGAGIPLKLLIDNRINTVWINDYDKAIYSVWDTILNDPVAL ISLIESVPFDYHSGHKISPEFSISFWKKQKDIYLNNKNHQHSIELAFSTLFLNRTNTSGIITAGPLGGFKQNRKTQIYAR FNKETLINKINLIHSFKSQIKLTRLNTLDMIPKIRNSVDPKNSFIFFDPPYFEQGKELYYSSFNEQGHKELANGILSLKQ YHWITTYDTAPQIQEDYTMAKQKYEYSLNYSANNKNRGKTAEFMFASPVTRLSSFEKVDLTPLA
Sequences:
>Translated_304_residues MPQTSSVFRYPGGKTQLYSFVHHLLKINSITDISLEPFAGGAGIPLKLLIDNRINTVWINDYDKAIYSVWDTILNDPVAL ISLIESVPFDYHSGHKISPEFSISFWKKQKDIYLNNKNHQHSIELAFSTLFLNRTNTSGIITAGPLGGFKQNRKTQIYAR FNKETLINKINLIHSFKSQIKLTRLNTLDMIPKIRNSVDPKNSFIFFDPPYFEQGKELYYSSFNEQGHKELANGILSLKQ YHWITTYDTAPQIQEDYTMAKQKYEYSLNYSANNKNRGKTAEFMFASPVTRLSSFEKVDLTPLA >Mature_303_residues PQTSSVFRYPGGKTQLYSFVHHLLKINSITDISLEPFAGGAGIPLKLLIDNRINTVWINDYDKAIYSVWDTILNDPVALI SLIESVPFDYHSGHKISPEFSISFWKKQKDIYLNNKNHQHSIELAFSTLFLNRTNTSGIITAGPLGGFKQNRKTQIYARF NKETLINKINLIHSFKSQIKLTRLNTLDMIPKIRNSVDPKNSFIFFDPPYFEQGKELYYSSFNEQGHKELANGILSLKQY HWITTYDTAPQIQEDYTMAKQKYEYSLNYSANNKNRGKTAEFMFASPVTRLSSFEKVDLTPLA
Specific function: Unknown
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34972; Mature: 34841
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQTSSVFRYPGGKTQLYSFVHHLLKINSITDISLEPFAGGAGIPLKLLIDNRINTVWIN CCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEEEECCCCEEEEC DYDKAIYSVWDTILNDPVALISLIESVPFDYHSGHKISPEFSISFWKKQKDIYLNNKNHQ CHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCC HSIELAFSTLFLNRTNTSGIITAGPLGGFKQNRKTQIYARFNKETLINKINLIHSFKSQI EEEEEEEEEEEEECCCCCCEEEECCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHE KLTRLNTLDMIPKIRNSVDPKNSFIFFDPPYFEQGKELYYSSFNEQGHKELANGILSLKQ EEEECCHHHHHHHHHHCCCCCCCEEEECCCHHHCCHHHHHHHCCCCHHHHHHHHHHHHHH YHWITTYDTAPQIQEDYTMAKQKYEYSLNYSANNKNRGKTAEFMFASPVTRLSSFEKVDL EEEEEEECCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCEEEEEECCHHHHHCCCCCCCC TPLA CCCC >Mature Secondary Structure PQTSSVFRYPGGKTQLYSFVHHLLKINSITDISLEPFAGGAGIPLKLLIDNRINTVWIN CCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEEEECCCCEEEEC DYDKAIYSVWDTILNDPVALISLIESVPFDYHSGHKISPEFSISFWKKQKDIYLNNKNHQ CHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCC HSIELAFSTLFLNRTNTSGIITAGPLGGFKQNRKTQIYARFNKETLINKINLIHSFKSQI EEEEEEEEEEEEECCCCCCEEEECCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHE KLTRLNTLDMIPKIRNSVDPKNSFIFFDPPYFEQGKELYYSSFNEQGHKELANGILSLKQ EEEECCHHHHHHHHHHCCCCCCCEEEECCCHHHCCHHHHHHHCCCCHHHHHHHHHHHHHH YHWITTYDTAPQIQEDYTMAKQKYEYSLNYSANNKNRGKTAEFMFASPVTRLSSFEKVDL EEEEEEECCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCEEEEEECCHHHHHCCCCCCCC TPLA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA