Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

Click here to switch to the map view.

The map label for this gene is 28379017

Identifier: 28379017

GI number: 28379017

Start: 2201698

End: 2202612

Strand: Direct

Name: 28379017

Synonym: lp_2454

Alternate gene names: NA

Gene position: 2201698-2202612 (Clockwise)

Preceding gene: 28379016

Following gene: 28379018

Centisome position: 66.55

GC content: 33.22

Gene sequence:

>915_bases
ATGCCACAAACTTCTTCTGTTTTTCGATACCCAGGTGGAAAAACTCAACTATATTCATTTGTGCACCATTTGCTAAAAAT
AAATAGCATTACTGACATTTCACTTGAACCGTTTGCAGGTGGCGCTGGGATTCCACTAAAATTATTAATAGACAATCGAA
TAAACACCGTCTGGATAAATGATTATGACAAAGCAATTTACTCAGTTTGGGACACAATTTTGAACGATCCTGTTGCTTTA
ATTTCTTTAATAGAATCAGTTCCCTTTGATTACCATTCCGGTCATAAAATTAGTCCAGAATTCAGTATTAGTTTCTGGAA
AAAACAGAAAGACATTTATTTAAATAATAAAAACCATCAACACTCAATCGAATTAGCATTTTCCACTCTATTTTTAAATA
GGACTAATACTAGTGGCATTATCACTGCAGGACCATTAGGTGGATTCAAGCAAAATAGGAAGACACAAATATACGCGCGC
TTCAATAAGGAAACTCTTATTAACAAAATTAATTTAATACACTCTTTTAAATCACAAATTAAATTGACTAGATTAAACAC
ACTGGATATGATCCCAAAAATCCGTAATTCCGTGGACCCTAAAAATAGTTTTATTTTTTTTGATCCTCCCTACTTTGAGC
AAGGTAAAGAATTATACTACTCATCGTTTAATGAACAGGGTCATAAGGAATTAGCAAATGGTATTTTATCTCTAAAGCAA
TACCATTGGATTACAACATACGATACAGCGCCTCAAATACAAGAGGACTATACAATGGCCAAACAAAAATATGAATATTC
ACTGAACTATTCCGCCAATAATAAAAATCGTGGTAAAACTGCAGAGTTCATGTTTGCTAGTCCAGTAACAAGATTGAGTT
CCTTTGAAAAAGTCGATTTAACACCACTAGCCTGA

Upstream 100 bases:

>100_bases
AGATTTTAGTGAGTTTCGAAAAGGATCTAAAGGCAATGCGCTATTAATTTCTGACCATCTTATTTTCAACATGCTATTAT
TTGTTTACGAGGTGATTAAA

Downstream 100 bases:

>100_bases
TAATCCAGGCTTTTATTTAAAAACAAAAAAGAACATATGTTTGGGAATGTCAACCTATTGTTATTTCCAGTTGGGAGGAA
TAAAACATGTCAGTAACCAA

Product: prophage Lp2 protein 3

Products: NA

Alternate protein names: DNA-Methyltransferase; DNA Methyltransferase; Cytosine-Specific DNA Methyltransferase; Adenine-Specific DNA Methyltransferase; Site-Specific DNA Methylase; Site-Specific DNA-Methyltransferase; DNA Adenine Methylase; Prophage DNA Adenine Methylase; N6 Adenine-Specific DNA Methyltransferase

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MPQTSSVFRYPGGKTQLYSFVHHLLKINSITDISLEPFAGGAGIPLKLLIDNRINTVWINDYDKAIYSVWDTILNDPVAL
ISLIESVPFDYHSGHKISPEFSISFWKKQKDIYLNNKNHQHSIELAFSTLFLNRTNTSGIITAGPLGGFKQNRKTQIYAR
FNKETLINKINLIHSFKSQIKLTRLNTLDMIPKIRNSVDPKNSFIFFDPPYFEQGKELYYSSFNEQGHKELANGILSLKQ
YHWITTYDTAPQIQEDYTMAKQKYEYSLNYSANNKNRGKTAEFMFASPVTRLSSFEKVDLTPLA

Sequences:

>Translated_304_residues
MPQTSSVFRYPGGKTQLYSFVHHLLKINSITDISLEPFAGGAGIPLKLLIDNRINTVWINDYDKAIYSVWDTILNDPVAL
ISLIESVPFDYHSGHKISPEFSISFWKKQKDIYLNNKNHQHSIELAFSTLFLNRTNTSGIITAGPLGGFKQNRKTQIYAR
FNKETLINKINLIHSFKSQIKLTRLNTLDMIPKIRNSVDPKNSFIFFDPPYFEQGKELYYSSFNEQGHKELANGILSLKQ
YHWITTYDTAPQIQEDYTMAKQKYEYSLNYSANNKNRGKTAEFMFASPVTRLSSFEKVDLTPLA
>Mature_303_residues
PQTSSVFRYPGGKTQLYSFVHHLLKINSITDISLEPFAGGAGIPLKLLIDNRINTVWINDYDKAIYSVWDTILNDPVALI
SLIESVPFDYHSGHKISPEFSISFWKKQKDIYLNNKNHQHSIELAFSTLFLNRTNTSGIITAGPLGGFKQNRKTQIYARF
NKETLINKINLIHSFKSQIKLTRLNTLDMIPKIRNSVDPKNSFIFFDPPYFEQGKELYYSSFNEQGHKELANGILSLKQY
HWITTYDTAPQIQEDYTMAKQKYEYSLNYSANNKNRGKTAEFMFASPVTRLSSFEKVDLTPLA

Specific function: Unknown

COG id: COG0338

COG function: function code L; Site-specific DNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34972; Mature: 34841

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQTSSVFRYPGGKTQLYSFVHHLLKINSITDISLEPFAGGAGIPLKLLIDNRINTVWIN
CCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEEEECCCCEEEEC
DYDKAIYSVWDTILNDPVALISLIESVPFDYHSGHKISPEFSISFWKKQKDIYLNNKNHQ
CHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCC
HSIELAFSTLFLNRTNTSGIITAGPLGGFKQNRKTQIYARFNKETLINKINLIHSFKSQI
EEEEEEEEEEEEECCCCCCEEEECCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHE
KLTRLNTLDMIPKIRNSVDPKNSFIFFDPPYFEQGKELYYSSFNEQGHKELANGILSLKQ
EEEECCHHHHHHHHHHCCCCCCCEEEECCCHHHCCHHHHHHHCCCCHHHHHHHHHHHHHH
YHWITTYDTAPQIQEDYTMAKQKYEYSLNYSANNKNRGKTAEFMFASPVTRLSSFEKVDL
EEEEEEECCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCEEEEEECCHHHHHCCCCCCCC
TPLA
CCCC
>Mature Secondary Structure 
PQTSSVFRYPGGKTQLYSFVHHLLKINSITDISLEPFAGGAGIPLKLLIDNRINTVWIN
CCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEEEECCCCEEEEC
DYDKAIYSVWDTILNDPVALISLIESVPFDYHSGHKISPEFSISFWKKQKDIYLNNKNHQ
CHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCC
HSIELAFSTLFLNRTNTSGIITAGPLGGFKQNRKTQIYARFNKETLINKINLIHSFKSQI
EEEEEEEEEEEEECCCCCCEEEECCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHE
KLTRLNTLDMIPKIRNSVDPKNSFIFFDPPYFEQGKELYYSSFNEQGHKELANGILSLKQ
EEEECCHHHHHHHHHHCCCCCCCEEEECCCHHHCCHHHHHHHCCCCHHHHHHHHHHHHHH
YHWITTYDTAPQIQEDYTMAKQKYEYSLNYSANNKNRGKTAEFMFASPVTRLSSFEKVDL
EEEEEEECCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCEEEEEECCHHHHHCCCCCCCC
TPLA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA