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The map label for this gene is yceK [H]

Identifier: 28378436

GI number: 28378436

Start: 1595184

End: 1595480

Strand: Direct

Name: yceK [H]

Synonym: lp_1757

Alternate gene names: 28378436

Gene position: 1595184-1595480 (Clockwise)

Preceding gene: 28378435

Following gene: 28378437

Centisome position: 48.22

GC content: 39.39

Gene sequence:

>297_bases
TTGGCAAATGAAATACCGCGGTCTGAAGTTGATTCCCAGCAGCTATTAGTATTTAAAGTGCTGGCTGACGTGGTTAGACT
GAACATTGTTAAGTATTTGAAGCTGCAGGATCAGGCCGTTACTTGTGGGCAAGTCGGACAAGCAATGGGGATTAGTAAAA
CCGCTGGTTCATATCATTTTAAATTGCTGGAAAAAGCAGGATTAATAACCGTCAAAAAAGTTGCACGTGAAAAATACGTC
ATGTTGAACCCCAAAACTTTTGATCACTATGTTACCCATTTTTATCAAAGCCTTTAA

Upstream 100 bases:

>100_bases
GCGTTACGGACAGATTATTTCCAATATTGGGGTAAACGAATTCGGCCAGCACGGACGGAATAAGCAAGCGACCTTTGTTG
GTAAAAGTAGGTGAAAAATA

Downstream 100 bases:

>100_bases
ATTGCTGAGTATTTTGGGCGGTCTTCAACTGTGATTCTGACTAATACCAGTTCTTAAGTGCCGATTGGTCTTTTGAACTG
GTATTTTTTTGTTGCCGAAT

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MANEIPRSEVDSQQLLVFKVLADVVRLNIVKYLKLQDQAVTCGQVGQAMGISKTAGSYHFKLLEKAGLITVKKVAREKYV
MLNPKTFDHYVTHFYQSL

Sequences:

>Translated_98_residues
MANEIPRSEVDSQQLLVFKVLADVVRLNIVKYLKLQDQAVTCGQVGQAMGISKTAGSYHFKLLEKAGLITVKKVAREKYV
MLNPKTFDHYVTHFYQSL
>Mature_97_residues
ANEIPRSEVDSQQLLVFKVLADVVRLNIVKYLKLQDQAVTCGQVGQAMGISKTAGSYHFKLLEKAGLITVKKVAREKYVM
LNPKTFDHYVTHFYQSL

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11102; Mature: 10971

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANEIPRSEVDSQQLLVFKVLADVVRLNIVKYLKLQDQAVTCGQVGQAMGISKTAGSYHF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHH
KLLEKAGLITVKKVAREKYVMLNPKTFDHYVTHFYQSL
HHHHHCCCHHHHHHHHCCEEEECCCHHHHHHHHHHHHC
>Mature Secondary Structure 
ANEIPRSEVDSQQLLVFKVLADVVRLNIVKYLKLQDQAVTCGQVGQAMGISKTAGSYHF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHH
KLLEKAGLITVKKVAREKYVMLNPKTFDHYVTHFYQSL
HHHHHCCCHHHHHHHHCCEEEECCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274031; 9384377 [H]