Click here to switch to the map view.

The map label for this gene is yebQ [H]

Identifier: 28378437

GI number: 28378437

Start: 1595743

End: 1597107

Strand: Direct

Name: yebQ [H]

Synonym: lp_1759

Alternate gene names: 28378437

Gene position: 1595743-1597107 (Clockwise)

Preceding gene: 28378436

Following gene: 28378439

Centisome position: 48.23

GC content: 46.74

Gene sequence:

>1365_bases
ATGGAAAATCGACAGCGACAGTTTGGCTGGTTATTAGCGTTAACTTCATTAGGCTTTTTTATGGCAATGATGGACTCAAT
GATTGTGACAACGGCGTCAACAGCAATTAAAATTGATTTCGACATCTCGGAGGCCAGTTTACAGTGGGCCCTCAACGCTT
ACAATGTCGCGATTGCAGCAACGTTACTTGTGGGCGTTGCATTAGGTGATCGCTTTGGACGCCGCCGGGTTTATAATCTC
GGCATTTTAGTTTTTACGCTGGGTTCAGTGTTTTGTGCATTAGCCAATCGAATGCCATTATTGATAGTGGCACGTGTCAT
TGCAGGTATTGGGGCCTCCGTCATGACACCGATGTCAATGGCTATTTTAACGGCTGCAGTTCCAGTTGCGAAGCGTGGGA
AAGCTTTAGGAATCTGGAGCGGTATCGGTGGACTGGCACTGATTGTCGGGCCGGCTCTGGGTGGTCTAATTGTAGCTAAA
TTAACCTGGCAGTGGATTTTTTGGATCAATGTGCCACTTGGCCTGATTGTCATAGGATTATCCCGGTTCTATTTACCAGA
AAGTACCGGGGTAGCAACACCAATTAATTTAACGGACGCAGGTCTTTCAATGTTAGCGATGACCGCAATCATTTGGGCCT
TAGCTGCCAGTTCGACTAGTATTAATGGACTTGGTCCGTTCGTTGGCCTGATAATTGGCTTAGTTGCAGGCACTTGGTTT
ATCAAGCGACAGCAACATGTCGTTGCACCGTTAATGCCGTTAACGCTTTTTAAAAAGCGTATTTTTACGATGGGAAATGT
GGCGACTTTTTTTTTATATGCCGCGATGTACGGAGTCGTTTTCTTTTTACCCCAATTCTTACAAGTTGTTCAGCATGATA
ATGCGTGGGAGGCAGGATTGTCCTTATTACCTTGGACTGGGACACTAGTATTAGTTGCGCCATTTGCTGGCAAAGCTGTG
GACCTCTACGGGGAAGCGATTGTGGCAGTTATCGGGCTATTATCTCAAACATTTGGGTATTTCATGCTTGGTTACCTAGT
TGCCAACCATGCGGCTTATGTTATGATGATTGCTCCGCTGGCAATTGCTGGGATGGGATTGTCAATGGCGGGCCCCGCGT
TACAGCATGCAGTTTTGGGGGGAGTGTCACCGGCAGTTATCGGTAAGGCAGCCGGAATTTACAACGTTTTTCGGTTACTT
GGAGGTGCGGCTGGCACGGCAATTGCTGTGGTGGTGTTTACAGTGGGTAGTCGGGTACCCGCGATGAATGCAATTGGCTT
TCAAACAGTCATGTTTAGTACAGCATTGATTTCAGCTATAGGCGCCGGTTGTGCTTGGCAAATAAGAAATTCAAAGAACT
TGTAG

Upstream 100 bases:

>100_bases
AACTAAATCTAAGAAAAAGATTGACATAGTAGATTTAAACTTTGTGAGTAGGCTTATTCAGCATTGGTAAGTCTGAATAA
ATGATAATGGGGCGGAAAAC

Downstream 100 bases:

>100_bases
CTGACAATAACGATCATTACAATGTGTGACAGATAGTTTGAGTAGCCTTAAAAGAGCGTGTTTAATCGGGTGACCGACTA
AGCACGCTCTTTTAAGGCTA

Product: transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MENRQRQFGWLLALTSLGFFMAMMDSMIVTTASTAIKIDFDISEASLQWALNAYNVAIAATLLVGVALGDRFGRRRVYNL
GILVFTLGSVFCALANRMPLLIVARVIAGIGASVMTPMSMAILTAAVPVAKRGKALGIWSGIGGLALIVGPALGGLIVAK
LTWQWIFWINVPLGLIVIGLSRFYLPESTGVATPINLTDAGLSMLAMTAIIWALAASSTSINGLGPFVGLIIGLVAGTWF
IKRQQHVVAPLMPLTLFKKRIFTMGNVATFFLYAAMYGVVFFLPQFLQVVQHDNAWEAGLSLLPWTGTLVLVAPFAGKAV
DLYGEAIVAVIGLLSQTFGYFMLGYLVANHAAYVMMIAPLAIAGMGLSMAGPALQHAVLGGVSPAVIGKAAGIYNVFRLL
GGAAGTAIAVVVFTVGSRVPAMNAIGFQTVMFSTALISAIGAGCAWQIRNSKNL

Sequences:

>Translated_454_residues
MENRQRQFGWLLALTSLGFFMAMMDSMIVTTASTAIKIDFDISEASLQWALNAYNVAIAATLLVGVALGDRFGRRRVYNL
GILVFTLGSVFCALANRMPLLIVARVIAGIGASVMTPMSMAILTAAVPVAKRGKALGIWSGIGGLALIVGPALGGLIVAK
LTWQWIFWINVPLGLIVIGLSRFYLPESTGVATPINLTDAGLSMLAMTAIIWALAASSTSINGLGPFVGLIIGLVAGTWF
IKRQQHVVAPLMPLTLFKKRIFTMGNVATFFLYAAMYGVVFFLPQFLQVVQHDNAWEAGLSLLPWTGTLVLVAPFAGKAV
DLYGEAIVAVIGLLSQTFGYFMLGYLVANHAAYVMMIAPLAIAGMGLSMAGPALQHAVLGGVSPAVIGKAAGIYNVFRLL
GGAAGTAIAVVVFTVGSRVPAMNAIGFQTVMFSTALISAIGAGCAWQIRNSKNL
>Mature_454_residues
MENRQRQFGWLLALTSLGFFMAMMDSMIVTTASTAIKIDFDISEASLQWALNAYNVAIAATLLVGVALGDRFGRRRVYNL
GILVFTLGSVFCALANRMPLLIVARVIAGIGASVMTPMSMAILTAAVPVAKRGKALGIWSGIGGLALIVGPALGGLIVAK
LTWQWIFWINVPLGLIVIGLSRFYLPESTGVATPINLTDAGLSMLAMTAIIWALAASSTSINGLGPFVGLIIGLVAGTWF
IKRQQHVVAPLMPLTLFKKRIFTMGNVATFFLYAAMYGVVFFLPQFLQVVQHDNAWEAGLSLLPWTGTLVLVAPFAGKAV
DLYGEAIVAVIGLLSQTFGYFMLGYLVANHAAYVMMIAPLAIAGMGLSMAGPALQHAVLGGVSPAVIGKAAGIYNVFRLL
GGAAGTAIAVVVFTVGSRVPAMNAIGFQTVMFSTALISAIGAGCAWQIRNSKNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

Organism=Escherichia coli, GI87081983, Length=407, Percent_Identity=31.2039312039312, Blast_Score=180, Evalue=2e-46,
Organism=Escherichia coli, GI1790195, Length=426, Percent_Identity=28.8732394366197, Blast_Score=142, Evalue=6e-35,
Organism=Escherichia coli, GI1788710, Length=401, Percent_Identity=27.1820448877805, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI1789042, Length=403, Percent_Identity=26.5508684863524, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1788392, Length=298, Percent_Identity=29.5302013422819, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1790146, Length=153, Percent_Identity=35.2941176470588, Blast_Score=91, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6321663, Length=150, Percent_Identity=32.6666666666667, Blast_Score=83, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6322958, Length=186, Percent_Identity=31.1827956989247, Blast_Score=75, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6325455, Length=150, Percent_Identity=31.3333333333333, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6323735, Length=303, Percent_Identity=23.7623762376238, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001411 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47838; Mature: 47838

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENRQRQFGWLLALTSLGFFMAMMDSMIVTTASTAIKIDFDISEASLQWALNAYNVAIAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEECCCHHHHHHHHHHHHHHHHH
TLLVGVALGDRFGRRRVYNLGILVFTLGSVFCALANRMPLLIVARVIAGIGASVMTPMSM
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHH
AILTAAVPVAKRGKALGIWSGIGGLALIVGPALGGLIVAKLTWQWIFWINVPLGLIVIGL
HHHHHHCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHH
SRFYLPESTGVATPINLTDAGLSMLAMTAIIWALAASSTSINGLGPFVGLIIGLVAGTWF
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
IKRQQHVVAPLMPLTLFKKRIFTMGNVATFFLYAAMYGVVFFLPQFLQVVQHDNAWEAGL
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC
SLLPWTGTLVLVAPFAGKAVDLYGEAIVAVIGLLSQTFGYFMLGYLVANHAAYVMMIAPL
EECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIAGMGLSMAGPALQHAVLGGVSPAVIGKAAGIYNVFRLLGGAAGTAIAVVVFTVGSRVP
HHHCCCCHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
AMNAIGFQTVMFSTALISAIGAGCAWQIRNSKNL
CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
>Mature Secondary Structure
MENRQRQFGWLLALTSLGFFMAMMDSMIVTTASTAIKIDFDISEASLQWALNAYNVAIAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEECCCHHHHHHHHHHHHHHHHH
TLLVGVALGDRFGRRRVYNLGILVFTLGSVFCALANRMPLLIVARVIAGIGASVMTPMSM
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHH
AILTAAVPVAKRGKALGIWSGIGGLALIVGPALGGLIVAKLTWQWIFWINVPLGLIVIGL
HHHHHHCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHH
SRFYLPESTGVATPINLTDAGLSMLAMTAIIWALAASSTSINGLGPFVGLIIGLVAGTWF
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
IKRQQHVVAPLMPLTLFKKRIFTMGNVATFFLYAAMYGVVFFLPQFLQVVQHDNAWEAGL
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC
SLLPWTGTLVLVAPFAGKAVDLYGEAIVAVIGLLSQTFGYFMLGYLVANHAAYVMMIAPL
EECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIAGMGLSMAGPALQHAVLGGVSPAVIGKAAGIYNVFRLLGGAAGTAIAVVVFTVGSRVP
HHHCCCCHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
AMNAIGFQTVMFSTALISAIGAGCAWQIRNSKNL
CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]