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The map label for this gene is 28378357

Identifier: 28378357

GI number: 28378357

Start: 1519809

End: 1520171

Strand: Direct

Name: 28378357

Synonym: lp_1667

Alternate gene names: NA

Gene position: 1519809-1520171 (Clockwise)

Preceding gene: 28378356

Following gene: 28378358

Centisome position: 45.94

GC content: 50.14

Gene sequence:

>363_bases
ATGCGAGTCTTTACTTGGATCGTGCGAACAATTGTGGCTGGTGCCGTTTTGATGTGTGTCATTATGATTGGTTTGGCACC
GCAAACAGTTGTTACACATTTTAATAGTGCCGGCTTGGCTGATTCATTCGGCAGCCGTTGGTGGCTAGTGATGTTACCAC
TATTAGTTGTGGTCACGGGTGAAGTCATGATTAAGTTAGCCCGTCAAAAACGGCGCAAGCTCGGACTCTTGCAACTGCCG
ACGCTAACAGGCTTTGAAGGGCAGTGTTTAGGTGTCATGGTGGGTTTCAGCGTCCTGTTGTGGGTTATATTGCAATCGGA
AGTGCAGGGCCGGCTAGTTAGCGGGGGCATTGGCGGATGGTGA

Upstream 100 bases:

>100_bases
GATTGTAGTTGGCTTCGATAATTAACCGTTTAAAAGAACGCATTTTGCTGTCCGTGCTGTCGCCAGCTTGCTATACTGGG
TCAAAAATGAGGTGAGCGTA

Downstream 100 bases:

>100_bases
TTAGGATGAGAAATTGGCAGCAGGATGTTTATGAATTCGCCTGAAATTAATTTCAAGCGAATTTTGGGTGGTGTAGCTAT
TTTAAATACTTAGACCATCA

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MRVFTWIVRTIVAGAVLMCVIMIGLAPQTVVTHFNSAGLADSFGSRWWLVMLPLLVVVTGEVMIKLARQKRRKLGLLQLP
TLTGFEGQCLGVMVGFSVLLWVILQSEVQGRLVSGGIGGW

Sequences:

>Translated_120_residues
MRVFTWIVRTIVAGAVLMCVIMIGLAPQTVVTHFNSAGLADSFGSRWWLVMLPLLVVVTGEVMIKLARQKRRKLGLLQLP
TLTGFEGQCLGVMVGFSVLLWVILQSEVQGRLVSGGIGGW
>Mature_120_residues
MRVFTWIVRTIVAGAVLMCVIMIGLAPQTVVTHFNSAGLADSFGSRWWLVMLPLLVVVTGEVMIKLARQKRRKLGLLQLP
TLTGFEGQCLGVMVGFSVLLWVILQSEVQGRLVSGGIGGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13096; Mature: 13096

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVFTWIVRTIVAGAVLMCVIMIGLAPQTVVTHFNSAGLADSFGSRWWLVMLPLLVVVTG
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHH
EVMIKLARQKRRKLGLLQLPTLTGFEGQCLGVMVGFSVLLWVILQSEVQGRLVSGGIGGW
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCC
>Mature Secondary Structure
MRVFTWIVRTIVAGAVLMCVIMIGLAPQTVVTHFNSAGLADSFGSRWWLVMLPLLVVVTG
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHH
EVMIKLARQKRRKLGLLQLPTLTGFEGQCLGVMVGFSVLLWVILQSEVQGRLVSGGIGGW
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA