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The map label for this gene is 28378025

Identifier: 28378025

GI number: 28378025

Start: 1144705

End: 1145550

Strand: Direct

Name: 28378025

Synonym: lp_1259

Alternate gene names: NA

Gene position: 1144705-1145550 (Clockwise)

Preceding gene: 28378024

Following gene: 28378026

Centisome position: 34.6

GC content: 47.16

Gene sequence:

>846_bases
ATGATTTATTCGTTAGGGCTAATGCTCGGCGTTGGGGTAATTGCCGGAATTTTCGGTGCTATTTTAGGTATCGGTGGTGG
CATGATCGTCACACCAATCCTGACACTTGGTTTGGGATTAGATATTAAGTATGCGATTGGGGCCAGTATTATCGCCGTGA
TTGCCACGAGTTCGGGCTCTACCATTGCATATTTACGTGATGAAATGTTGAACTTACGCGTCGCGATGTTTCTTGAAATT
GCGACGACGGTCGGGGCCGTCCTCGGGGCAGTGTTGACGGGGGTGCTTAATGCAACATTCCTGTACTTCCTATTTGGGGC
GCTGTTAGTTTTCACGACGTATAATATGATTCGTAAATTAATGAGTAAGAACGGTGAATTACCGTCAGTCAAAGATGACA
AGCTGGCGACACAGTTGAACTTAAATGGTACTTATTATGATAAAGCATTGAATAAGCAAGTTGATTATCAGGTTGAAAAC
GTGCCGGGTGGTTTTTCCATGATGTTCGGTGCTGGTTTCGCCAGTGGCTTGTTGGGAATCGGGAGTGGCGCGTTCAAAGT
GCTAGCCATGGATACGATTATGCATATGCCGCTTAAACCGTCATCAGCAACTTCTAACCTGATGATGGGGGTGACGGCGG
CAGCGAGTGCGATGATCTACTTCTTTAATGGGTCAATCAAACCCGGAATCGCGGCCCCATTAGCTATCGGGATTATCGTC
GGTGCCTTAATCGGCTCACGAATCATGACGCGGCTCAAGCCACGCTTGATTCGCATGATCTTTGTGCCCGTGATGCTCTA
TCTGGGAATTCAAATGATTGCTAAAGGATTCGGGGTGACCATCTAA

Upstream 100 bases:

>100_bases
TGTCGTACTGGGGATACGCTAACCTTCATTTAATAATTAGATATCAATCGGTTTAAATGGTACACTAACAATTGAAATTT
AAAGGGTGAAGGTGAAGGAA

Downstream 100 bases:

>100_bases
TGGATAAGCAAAAAACAACTAAAGCGCAAGAGATGCACGCCGTTGAAATGATGATTGGGTATATTCTACGAATTGGCGTC
ATTGTTTCTGCAATCGTGAT

Product: transport protein

Products: NA

Alternate protein names: Conserved Domain Protein

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MIYSLGLMLGVGVIAGIFGAILGIGGGMIVTPILTLGLGLDIKYAIGASIIAVIATSSGSTIAYLRDEMLNLRVAMFLEI
ATTVGAVLGAVLTGVLNATFLYFLFGALLVFTTYNMIRKLMSKNGELPSVKDDKLATQLNLNGTYYDKALNKQVDYQVEN
VPGGFSMMFGAGFASGLLGIGSGAFKVLAMDTIMHMPLKPSSATSNLMMGVTAAASAMIYFFNGSIKPGIAAPLAIGIIV
GALIGSRIMTRLKPRLIRMIFVPVMLYLGIQMIAKGFGVTI

Sequences:

>Translated_281_residues
MIYSLGLMLGVGVIAGIFGAILGIGGGMIVTPILTLGLGLDIKYAIGASIIAVIATSSGSTIAYLRDEMLNLRVAMFLEI
ATTVGAVLGAVLTGVLNATFLYFLFGALLVFTTYNMIRKLMSKNGELPSVKDDKLATQLNLNGTYYDKALNKQVDYQVEN
VPGGFSMMFGAGFASGLLGIGSGAFKVLAMDTIMHMPLKPSSATSNLMMGVTAAASAMIYFFNGSIKPGIAAPLAIGIIV
GALIGSRIMTRLKPRLIRMIFVPVMLYLGIQMIAKGFGVTI
>Mature_281_residues
MIYSLGLMLGVGVIAGIFGAILGIGGGMIVTPILTLGLGLDIKYAIGASIIAVIATSSGSTIAYLRDEMLNLRVAMFLEI
ATTVGAVLGAVLTGVLNATFLYFLFGALLVFTTYNMIRKLMSKNGELPSVKDDKLATQLNLNGTYYDKALNKQVDYQVEN
VPGGFSMMFGAGFASGLLGIGSGAFKVLAMDTIMHMPLKPSSATSNLMMGVTAAASAMIYFFNGSIKPGIAAPLAIGIIV
GALIGSRIMTRLKPRLIRMIFVPVMLYLGIQMIAKGFGVTI

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29500; Mature: 29500

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYSLGLMLGVGVIAGIFGAILGIGGGMIVTPILTLGLGLDIKYAIGASIIAVIATSSGS
CEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHEEHHEECCCCC
TIAYLRDEMLNLRVAMFLEIATTVGAVLGAVLTGVLNATFLYFLFGALLVFTTYNMIRKL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSKNGELPSVKDDKLATQLNLNGTYYDKALNKQVDYQVENVPGGFSMMFGAGFASGLLGI
HHCCCCCCCCCCCCHHEEEECCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHC
GSGAFKVLAMDTIMHMPLKPSSATSNLMMGVTAAASAMIYFFNGSIKPGIAAPLAIGIIV
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHH
GALIGSRIMTRLKPRLIRMIFVPVMLYLGIQMIAKGFGVTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIYSLGLMLGVGVIAGIFGAILGIGGGMIVTPILTLGLGLDIKYAIGASIIAVIATSSGS
CEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHEEHHEECCCCC
TIAYLRDEMLNLRVAMFLEIATTVGAVLGAVLTGVLNATFLYFLFGALLVFTTYNMIRKL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSKNGELPSVKDDKLATQLNLNGTYYDKALNKQVDYQVENVPGGFSMMFGAGFASGLLGI
HHCCCCCCCCCCCCHHEEEECCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHC
GSGAFKVLAMDTIMHMPLKPSSATSNLMMGVTAAASAMIYFFNGSIKPGIAAPLAIGIIV
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHH
GALIGSRIMTRLKPRLIRMIFVPVMLYLGIQMIAKGFGVTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA