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The map label for this gene is 28378026

Identifier: 28378026

GI number: 28378026

Start: 1145550

End: 1145930

Strand: Direct

Name: 28378026

Synonym: lp_1260

Alternate gene names: NA

Gene position: 1145550-1145930 (Clockwise)

Preceding gene: 28378025

Following gene: 28378027

Centisome position: 34.63

GC content: 41.47

Gene sequence:

>381_bases
ATGGATAAGCAAAAAACAACTAAAGCGCAAGAGATGCACGCCGTTGAAATGATGATTGGGTATATTCTACGAATTGGCGT
CATTGTTTCTGCAATCGTGATTATTATTGGGATGCTTCTGATGTTGATTCAGGGCAATGGTGGTTATGCAAATGGTATGG
AACCCCATACGGTCGCTGATATTCTAGCCGGCATTGTGGCACTTAAACCATATGCCGTGATTATGTTAGGTTTATTTCTA
TTGATTTTAACGCCAACTTTGCGGGTTGCGGTCTCTATCTACGCCTTTGCAGTGGAAAAAGACCACTTATATGTTTGGAT
TACGACGATTGTTCTCATCATCTTGATTGTTGCTTCGGTGATTGGGTATCTCGGTAACTAG

Upstream 100 bases:

>100_bases
TGACGCGGCTCAAGCCACGCTTGATTCGCATGATCTTTGTGCCCGTGATGCTCTATCTGGGAATTCAAATGATTGCTAAA
GGATTCGGGGTGACCATCTA

Downstream 100 bases:

>100_bases
GCTAGACGGAGCTGATTAATCAGGTTGAGTCGTGATTAAAATGGGCGCACATCTAAAATGGCTACCAGCTTGTTTCGAGG
TTAATGTGGAAAGAATCTAA

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MDKQKTTKAQEMHAVEMMIGYILRIGVIVSAIVIIIGMLLMLIQGNGGYANGMEPHTVADILAGIVALKPYAVIMLGLFL
LILTPTLRVAVSIYAFAVEKDHLYVWITTIVLIILIVASVIGYLGN

Sequences:

>Translated_126_residues
MDKQKTTKAQEMHAVEMMIGYILRIGVIVSAIVIIIGMLLMLIQGNGGYANGMEPHTVADILAGIVALKPYAVIMLGLFL
LILTPTLRVAVSIYAFAVEKDHLYVWITTIVLIILIVASVIGYLGN
>Mature_126_residues
MDKQKTTKAQEMHAVEMMIGYILRIGVIVSAIVIIIGMLLMLIQGNGGYANGMEPHTVADILAGIVALKPYAVIMLGLFL
LILTPTLRVAVSIYAFAVEKDHLYVWITTIVLIILIVASVIGYLGN

Specific function: Unknown

COG id: COG4272

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13683; Mature: 13683

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKQKTTKAQEMHAVEMMIGYILRIGVIVSAIVIIIGMLLMLIQGNGGYANGMEPHTVAD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
ILAGIVALKPYAVIMLGLFLLILTPTLRVAVSIYAFAVEKDHLYVWITTIVLIILIVASV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
IGYLGN
HHHHCC
>Mature Secondary Structure
MDKQKTTKAQEMHAVEMMIGYILRIGVIVSAIVIIIGMLLMLIQGNGGYANGMEPHTVAD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
ILAGIVALKPYAVIMLGLFLLILTPTLRVAVSIYAFAVEKDHLYVWITTIVLIILIVASV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
IGYLGN
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA