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The map label for this gene is dacB [H]

Identifier: 28377819

GI number: 28377819

Start: 931038

End: 931811

Strand: Direct

Name: dacB [H]

Synonym: lp_1010

Alternate gene names: 28377819

Gene position: 931038-931811 (Clockwise)

Preceding gene: 28377818

Following gene: 28377820

Centisome position: 28.14

GC content: 46.25

Gene sequence:

>774_bases
ATGTTAAAGAGAAATTTGTTAAGAGGTCTAGCATTAGTGTCATTAGCAGGTGTCCTGGCTGGCTGTGGTGCTAGCCAGTC
GACGTCTAAAGCGACTAGTAGTTCTACGAGTGCTAAGTCGACGAAGACGCAGACCAAGCGGCAACGACTGATTAGTGCCT
TACCGAAAGGCGTTAAATCGACCGATAGCGACTTAGTGGTCGTCAATAAGTGGCATAAGCGCGCTGAGATGACATTTAAT
AAGTCGAGCGTGGATGGTATTGAAGTCCGTAGTTCTATCGTCAAACCATTGGAAGCCTTTCTAGCGGGGGCAAAAAAAGC
CGGCTATCCAGCAACAATCGTGTCTGGGTATCGTTCAGTCGCTTATCAAAAAGAGGTTTGGGATCAGTCGATTCAAACCT
ATGAGAATCAAGGAAAATCAGCCAAGGAAGCCTTAAAGCTGACTAAAGAATATGTCGCAGTTCCTAGTGGTAGTGAGCAT
GAAACTGGTCTCGCAGCAGATATCATGAACACGCACTGGTACAGCACTCATGGTAATCAATTATTGTCATCATCCGACAA
GAACAAGGGTCAGCAGTGGTTGATTAATCACGCGGCGGACTATGGATTTGTGTTGCGCTTTACTAAAGATGGTAAGCAGT
CGACCGGGATTGACTATGAATCTTGGCATTTCCGTTACGTTGGTAAGGCGAGTGCGGAATTCATGACTAAGCACAATTTG
ACTCTCGAACAGTACGTCAGCTTGCTGCAAGCTCGAGAAAAGGCGGCCAAGTAA

Upstream 100 bases:

>100_bases
ATGAGAATATGTAATCATTAAAAATTCGCAAACTTATCCTTAGGAATAGGCTAGTCGGCTATGACTATGCTAAGCTGAAA
TGAGAAAGGCAGCGAGAGAG

Downstream 100 bases:

>100_bases
TAAGCTAGCCGTATTATTGATGACCGCCCCCAATTAATACTATATTATGGCGTACGTTAGGAATTAGCTAGCGTGCGCTT
TTAAATTGTCTTCGGTTTAG

Product: serine-type D-Ala-D-Ala carboxypeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MLKRNLLRGLALVSLAGVLAGCGASQSTSKATSSSTSAKSTKTQTKRQRLISALPKGVKSTDSDLVVVNKWHKRAEMTFN
KSSVDGIEVRSSIVKPLEAFLAGAKKAGYPATIVSGYRSVAYQKEVWDQSIQTYENQGKSAKEALKLTKEYVAVPSGSEH
ETGLAADIMNTHWYSTHGNQLLSSSDKNKGQQWLINHAADYGFVLRFTKDGKQSTGIDYESWHFRYVGKASAEFMTKHNL
TLEQYVSLLQAREKAAK

Sequences:

>Translated_257_residues
MLKRNLLRGLALVSLAGVLAGCGASQSTSKATSSSTSAKSTKTQTKRQRLISALPKGVKSTDSDLVVVNKWHKRAEMTFN
KSSVDGIEVRSSIVKPLEAFLAGAKKAGYPATIVSGYRSVAYQKEVWDQSIQTYENQGKSAKEALKLTKEYVAVPSGSEH
ETGLAADIMNTHWYSTHGNQLLSSSDKNKGQQWLINHAADYGFVLRFTKDGKQSTGIDYESWHFRYVGKASAEFMTKHNL
TLEQYVSLLQAREKAAK
>Mature_257_residues
MLKRNLLRGLALVSLAGVLAGCGASQSTSKATSSSTSAKSTKTQTKRQRLISALPKGVKSTDSDLVVVNKWHKRAEMTFN
KSSVDGIEVRSSIVKPLEAFLAGAKKAGYPATIVSGYRSVAYQKEVWDQSIQTYENQGKSAKEALKLTKEYVAVPSGSEH
ETGLAADIMNTHWYSTHGNQLLSSSDKNKGQQWLINHAADYGFVLRFTKDGKQSTGIDYESWHFRYVGKASAEFMTKHNL
TLEQYVSLLQAREKAAK

Specific function: Unknown

COG id: COG1876

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M15B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009045
- InterPro:   IPR003709 [H]

Pfam domain/function: PF02557 VanY [H]

EC number: NA

Molecular weight: Translated: 28242; Mature: 28242

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRNLLRGLALVSLAGVLAGCGASQSTSKATSSSTSAKSTKTQTKRQRLISALPKGVKS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC
TDSDLVVVNKWHKRAEMTFNKSSVDGIEVRSSIVKPLEAFLAGAKKAGYPATIVSGYRSV
CCCCEEEEECHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
AYQKEVWDQSIQTYENQGKSAKEALKLTKEYVAVPSGSEHETGLAADIMNTHWYSTHGNQ
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCH
LLSSSDKNKGQQWLINHAADYGFVLRFTKDGKQSTGIDYESWHFRYVGKASAEFMTKHNL
HHHCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHCCC
TLEQYVSLLQAREKAAK
CHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKRNLLRGLALVSLAGVLAGCGASQSTSKATSSSTSAKSTKTQTKRQRLISALPKGVKS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC
TDSDLVVVNKWHKRAEMTFNKSSVDGIEVRSSIVKPLEAFLAGAKKAGYPATIVSGYRSV
CCCCEEEEECHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
AYQKEVWDQSIQTYENQGKSAKEALKLTKEYVAVPSGSEHETGLAADIMNTHWYSTHGNQ
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCH
LLSSSDKNKGQQWLINHAADYGFVLRFTKDGKQSTGIDYESWHFRYVGKASAEFMTKHNL
HHHCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCHHHHHHHHCCC
TLEQYVSLLQAREKAAK
CHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]