| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377387
Identifier: 28377387
GI number: 28377387
Start: 443848
End: 444057
Strand: Direct
Name: 28377387
Synonym: lp_0496
Alternate gene names: NA
Gene position: 443848-444057 (Clockwise)
Preceding gene: 28377385
Following gene: 28377388
Centisome position: 13.42
GC content: 36.19
Gene sequence:
>210_bases ATGACTGTTTATTTAACTGCGAATAAGGTGATCAAACAAACCGTTTTTCAGCAGATAAAGTCGATGGTAGTGCAGATGGC TGATCAATCTAGCCTGAGTTTGATTGCTGAACAGTCCGTTGTTGATAACCCTTTTCAGTATAGCATAAACGCCGAAATGA ACAAAATTTCAAATGTAGTATTTACAAATGTTCAGTTCGTGATATACTGA
Upstream 100 bases:
>100_bases CCTTATCTTGATTGATTGCTTTTTCCATATCCTGACTTCCAATCTTTGAATAACACTTTAATTGTATTCGTTAGTTTATG ATTAATTATTTTTTGAAATC
Downstream 100 bases:
>100_bases AGTTGTTAAAAAGAAAGGGGTTTCATTAATCATGAAATTGAATCGTTATTTAGATCACACGTTATTAAAACCGGAAGCGA CTGAGCAACAAATTGATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MTVYLTANKVIKQTVFQQIKSMVVQMADQSSLSLIAEQSVVDNPFQYSINAEMNKISNVVFTNVQFVIY
Sequences:
>Translated_69_residues MTVYLTANKVIKQTVFQQIKSMVVQMADQSSLSLIAEQSVVDNPFQYSINAEMNKISNVVFTNVQFVIY >Mature_68_residues TVYLTANKVIKQTVFQQIKSMVVQMADQSSLSLIAEQSVVDNPFQYSINAEMNKISNVVFTNVQFVIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7836; Mature: 7705
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVYLTANKVIKQTVFQQIKSMVVQMADQSSLSLIAEQSVVDNPFQYSINAEMNKISNVV CEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHE FTNVQFVIY ECEEEEEEC >Mature Secondary Structure TVYLTANKVIKQTVFQQIKSMVVQMADQSSLSLIAEQSVVDNPFQYSINAEMNKISNVV EEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHE FTNVQFVIY ECEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA