| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is ywqN [H]
Identifier: 28377383
GI number: 28377383
Start: 438606
End: 439160
Strand: Direct
Name: ywqN [H]
Synonym: lp_0490
Alternate gene names: 28377383
Gene position: 438606-439160 (Clockwise)
Preceding gene: 28377382
Following gene: 28377384
Centisome position: 13.26
GC content: 33.87
Gene sequence:
>555_bases ATTAGCTCATCAACTCATGTTCCTTCGAATTCAACACTTTTGGCCAGATTAGTATTAGATGAGCTAGACTATCAGGAAAT AAATCTAAGTAGCGTAAAAATATTTGATGTTAAAGATTTTCGCTTTTCTCCAAGCTGGCCACGGCAGAACGATGAATATT ACGGAATAATTGAACAATTAAAAAGGGCAAAAATTATTGTTTTTTCAACTCCCATATATTGGTACGGCACTTCTGCTGTA CTCAAAAGATTCATTGAAAGATGGTCAGAAAGCATAAAAGTTGACACTGATTTTCGTGAATCTATGCAAGAAAAGAAAAT TGTTCTGATTATTGTTGGTGGGGATAACCCAGTGGTTAAAGGACAGATTATTATTGACCAGTTTAAGTATATCTGTGAAT TCTTAGGCATGAAGTTAATTGTAAGTGTTATCGGAGAAGCTAACCGACCGGATACAATCTCTAACGATCCTAATGCGTTA TATGAAGCAAAAAAAGCAAACATTATATTAAAAAAATTAGATATGGGAGGTAATGATTTTGCCAATATCCAGTAG
Upstream 100 bases:
>100_bases ATGGAAGGGAATCCTAAAAGCCATTATGCTAAGATCTCTGTCTCTCAAGCTGACAAATGGAAGAAGCAGATCAAATATCA ATACGAAAAGAATTATCTTA
Downstream 100 bases:
>100_bases GGCAGCGTTTCGTGATGAATTACTTGCGTTAGCAAAAAATGACAAGCGTTTAATTGATATTGAAGCTGATTTAGGCGGTC AAACTAATCAGTTTAAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSSSTHVPSNSTLLARLVLDELDYQEINLSSVKIFDVKDFRFSPSWPRQNDEYYGIIEQLKRAKIIVFSTPIYWYGTSAV LKRFIERWSESIKVDTDFRESMQEKKIVLIIVGGDNPVVKGQIIIDQFKYICEFLGMKLIVSVIGEANRPDTISNDPNAL YEAKKANIILKKLDMGGNDFANIQ
Sequences:
>Translated_184_residues MSSSTHVPSNSTLLARLVLDELDYQEINLSSVKIFDVKDFRFSPSWPRQNDEYYGIIEQLKRAKIIVFSTPIYWYGTSAV LKRFIERWSESIKVDTDFRESMQEKKIVLIIVGGDNPVVKGQIIIDQFKYICEFLGMKLIVSVIGEANRPDTISNDPNAL YEAKKANIILKKLDMGGNDFANIQ >Mature_183_residues SSSTHVPSNSTLLARLVLDELDYQEINLSSVKIFDVKDFRFSPSWPRQNDEYYGIIEQLKRAKIIVFSTPIYWYGTSAVL KRFIERWSESIKVDTDFRESMQEKKIVLIIVGGDNPVVKGQIIIDQFKYICEFLGMKLIVSVIGEANRPDTISNDPNALY EAKKANIILKKLDMGGNDFANIQ
Specific function: Putative NADPH-dependent oxidoreductase (Potential) [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 21060; Mature: 20928
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSTHVPSNSTLLARLVLDELDYQEINLSSVKIFDVKDFRFSPSWPRQNDEYYGIIEQL CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHH KRAKIIVFSTPIYWYGTSAVLKRFIERWSESIKVDTDFRESMQEKKIVLIIVGGDNPVVK HHCEEEEEECCCEEECHHHHHHHHHHHHHHHEECCCHHHHHHHCCCEEEEEECCCCCEEE GQIIIDQFKYICEFLGMKLIVSVIGEANRPDTISNDPNALYEAKKANIILKKLDMGGNDF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHEEEEEEECCCCCCC ANIQ CCCC >Mature Secondary Structure SSSTHVPSNSTLLARLVLDELDYQEINLSSVKIFDVKDFRFSPSWPRQNDEYYGIIEQL CCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHH KRAKIIVFSTPIYWYGTSAVLKRFIERWSESIKVDTDFRESMQEKKIVLIIVGGDNPVVK HHCEEEEEECCCEEECHHHHHHHHHHHHHHHEECCCHHHHHHHCCCEEEEEECCCCCEEE GQIIIDQFKYICEFLGMKLIVSVIGEANRPDTISNDPNALYEAKKANIILKKLDMGGNDF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHEEEEEEECCCCCCC ANIQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]