| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377384
Identifier: 28377384
GI number: 28377384
Start: 440063
End: 441274
Strand: Direct
Name: 28377384
Synonym: lp_0492
Alternate gene names: NA
Gene position: 440063-441274 (Clockwise)
Preceding gene: 28377383
Following gene: 28377385
Centisome position: 13.3
GC content: 36.63
Gene sequence:
>1212_bases ATGAATATAACAAGTCTTTTAGGTAGAAGAGAATTTCGTAACTTCTTTCTGGCTGATATAATTTCTGGATTTGGTGTCGG GCTAACTACTGTCGGGGCAAATTGGTATATGCTACAATCTACGCATTCAAACAAATTAGTTGGAATGTACTTAACCGTGA ATGTATTGGCTGGCTTTTTGATGTCACCATTAGCTGGTAGCTTGACGGATAGGTTTTCACGTAAACAAGTGATTCTTTGG ACCTTTTTAGGTAGAGCATTACCTATGAGTTTGATTGCATTAGTAATTGGATACTCTGGTTTTAATCTATGGGCAATGTA CGGGCTCGCAATTTTAACAGGAGCCGGATGGATTACCTATATGGCTGCTTCCAGAAGCTATGTACAAGCTGTACTACCAG AAGAACTGTTAGGAACAGCCAACTCATTTATTGAAGTGTCATTGCAAGTTGGTATGTTTGCCGCTGGTGCTATCTCGGGA ATTATTTTGAATTATACTGGCTTTATGATCATTCTGGTTATAAATATTATTATGTTTTTTGTAGCAGTTTTATTAGTAGC AGCCATTAAGGCAGACTCACCTGTTAACAAAGGGATAAATGAAGAATCAGCTGGCTTTTCTAATGGCCTAGAGTATATTT GGAAGCACAAGTCAATCTTAAGTATGGGAATTATTTCAATTTTACCTTTAATAGTCACGCAGCTTTTTAACGTTTCGTCA CCGGATTATGTGTCAACAGTTTTAAGAGCCAATAGTGTGGTATATGGATTTGTAGATATGGGGTATGGAATTGGAGGATT GGCTGCTGGATTAATCACTGGATACTTAATTAATCACTTTAAAAATAAGAATATCATTGTTTTTTTCTTTACTTTAGCTA CTATAGGACTTTTGACATTATATTGGACACATGTTATTCCCTTAACCTATGTTTGTACGTTCAGCCTTGGCTTGAGTAAC TCAGCACTTCGAGTTGTTATTAATACAGTGCTAATGCATCGAGTAGACAAGAAATTTATGGGTAGAGCAACATCTATTTG GAATGGTACCGCTCAATTAATTGAAGTATTTGCATCGACCTTAATGGGAGTCGCTAATGATAAATTTGGGGCTAACATTG GTTTTCTGTGGATGGCCGTGATTATGCTAATTGGCGCTGTATGGAGTTTTATCATGTTAAATACAACAAAGTTAAGGAGT AAGCAAGTATGA
Upstream 100 bases:
>100_bases ATTTATGGTGGAAGTCATTATGAGGTTTTAGACTATTTAGATTTTTCGATATCGGATTTGAAAAAGCAAGTATCAAAGTT CTTGAAAGGATGAAGTTACA
Downstream 100 bases:
>100_bases AGAAAAGAGTAATTTTAATCGAACCAAGTTTCTATGGAGTTTCCTTTGTCCGAGCTGCTCGAGAATTAGGTTGTGAAGTT ATTTGTGTCGTTAGTGATCA
Product: transport protein
Products: NA
Alternate protein names: Facilitator Family Transporter; Amino Acid Adenylation Domain-Containing Protein; Facilitator Superfamily Protein; MFS Family Transporter Protein; Permease; Transporter Facilitator Family Protein; Membrane Transporter Protein; Facilitator Superfamily Permease; Permeases Of Facilitator Superfamily
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MNITSLLGRREFRNFFLADIISGFGVGLTTVGANWYMLQSTHSNKLVGMYLTVNVLAGFLMSPLAGSLTDRFSRKQVILW TFLGRALPMSLIALVIGYSGFNLWAMYGLAILTGAGWITYMAASRSYVQAVLPEELLGTANSFIEVSLQVGMFAAGAISG IILNYTGFMIILVINIIMFFVAVLLVAAIKADSPVNKGINEESAGFSNGLEYIWKHKSILSMGIISILPLIVTQLFNVSS PDYVSTVLRANSVVYGFVDMGYGIGGLAAGLITGYLINHFKNKNIIVFFFTLATIGLLTLYWTHVIPLTYVCTFSLGLSN SALRVVINTVLMHRVDKKFMGRATSIWNGTAQLIEVFASTLMGVANDKFGANIGFLWMAVIMLIGAVWSFIMLNTTKLRS KQV
Sequences:
>Translated_403_residues MNITSLLGRREFRNFFLADIISGFGVGLTTVGANWYMLQSTHSNKLVGMYLTVNVLAGFLMSPLAGSLTDRFSRKQVILW TFLGRALPMSLIALVIGYSGFNLWAMYGLAILTGAGWITYMAASRSYVQAVLPEELLGTANSFIEVSLQVGMFAAGAISG IILNYTGFMIILVINIIMFFVAVLLVAAIKADSPVNKGINEESAGFSNGLEYIWKHKSILSMGIISILPLIVTQLFNVSS PDYVSTVLRANSVVYGFVDMGYGIGGLAAGLITGYLINHFKNKNIIVFFFTLATIGLLTLYWTHVIPLTYVCTFSLGLSN SALRVVINTVLMHRVDKKFMGRATSIWNGTAQLIEVFASTLMGVANDKFGANIGFLWMAVIMLIGAVWSFIMLNTTKLRS KQV >Mature_403_residues MNITSLLGRREFRNFFLADIISGFGVGLTTVGANWYMLQSTHSNKLVGMYLTVNVLAGFLMSPLAGSLTDRFSRKQVILW TFLGRALPMSLIALVIGYSGFNLWAMYGLAILTGAGWITYMAASRSYVQAVLPEELLGTANSFIEVSLQVGMFAAGAISG IILNYTGFMIILVINIIMFFVAVLLVAAIKADSPVNKGINEESAGFSNGLEYIWKHKSILSMGIISILPLIVTQLFNVSS PDYVSTVLRANSVVYGFVDMGYGIGGLAAGLITGYLINHFKNKNIIVFFFTLATIGLLTLYWTHVIPLTYVCTFSLGLSN SALRVVINTVLMHRVDKKFMGRATSIWNGTAQLIEVFASTLMGVANDKFGANIGFLWMAVIMLIGAVWSFIMLNTTKLRS KQV
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44032; Mature: 44032
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNITSLLGRREFRNFFLADIISGFGVGLTTVGANWYMLQSTHSNKLVGMYLTVNVLAGFL CCHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCEEEEEECCCCCEEEHHHHHHHHHHHH MSPLAGSLTDRFSRKQVILWTFLGRALPMSLIALVIGYSGFNLWAMYGLAILTGAGWITY HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHH MAASRSYVQAVLPEELLGTANSFIEVSLQVGMFAAGAISGIILNYTGFMIILVINIIMFF HHHHHHHHHHHCCHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAVLLVAAIKADSPVNKGINEESAGFSNGLEYIWKHKSILSMGIISILPLIVTQLFNVSS HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PDYVSTVLRANSVVYGFVDMGYGIGGLAAGLITGYLINHFKNKNIIVFFFTLATIGLLTL CHHHHHHHHHCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH YWTHVIPLTYVCTFSLGLSNSALRVVINTVLMHRVDKKFMGRATSIWNGTAQLIEVFAST HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHH LMGVANDKFGANIGFLWMAVIMLIGAVWSFIMLNTTKLRSKQV HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNITSLLGRREFRNFFLADIISGFGVGLTTVGANWYMLQSTHSNKLVGMYLTVNVLAGFL CCHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCEEEEEECCCCCEEEHHHHHHHHHHHH MSPLAGSLTDRFSRKQVILWTFLGRALPMSLIALVIGYSGFNLWAMYGLAILTGAGWITY HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHH MAASRSYVQAVLPEELLGTANSFIEVSLQVGMFAAGAISGIILNYTGFMIILVINIIMFF HHHHHHHHHHHCCHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAVLLVAAIKADSPVNKGINEESAGFSNGLEYIWKHKSILSMGIISILPLIVTQLFNVSS HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PDYVSTVLRANSVVYGFVDMGYGIGGLAAGLITGYLINHFKNKNIIVFFFTLATIGLLTL CHHHHHHHHHCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH YWTHVIPLTYVCTFSLGLSNSALRVVINTVLMHRVDKKFMGRATSIWNGTAQLIEVFAST HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHH LMGVANDKFGANIGFLWMAVIMLIGAVWSFIMLNTTKLRSKQV HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA