| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377299
Identifier: 28377299
GI number: 28377299
Start: 354484
End: 354675
Strand: Direct
Name: 28377299
Synonym: lp_0387
Alternate gene names: NA
Gene position: 354484-354675 (Clockwise)
Preceding gene: 28377298
Following gene: 28377300
Centisome position: 10.72
GC content: 39.06
Gene sequence:
>192_bases TTGAGAAAAAGGACCCAAACTAATTTAGTAGATGTCATTATTCCAGTAGCTTATTTTGCCGTTCGAGCAATCTTAGCTGT GATGATACAAACTACGACACATGGCCTAGTATCGTCATTAGTTGGTAGCTTGTTATTCAGTTTGGCTTACTATGGTTTAT CTGCTTGGGGGAAGTGCCTGGCTAATAAGTAA
Upstream 100 bases:
>100_bases TCGTAAAGGTATTCAAAAATAGTAAAAAATGACAATGATTATCATTATTTGAGCAGTCATCATAGGAATTACGCTGGGAT TAGGATTATGGAGTTATTGG
Downstream 100 bases:
>100_bases TGTGGACTAAACCGATATTCGACGAGGACTAATTACCGAGTATCGGTTATTTTATAGAAAAGTTTAGATTGGTTGAGTTG TGTGGGAGAAAACAACACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MRKRTQTNLVDVIIPVAYFAVRAILAVMIQTTTHGLVSSLVGSLLFSLAYYGLSAWGKCLANK
Sequences:
>Translated_63_residues MRKRTQTNLVDVIIPVAYFAVRAILAVMIQTTTHGLVSSLVGSLLFSLAYYGLSAWGKCLANK >Mature_63_residues MRKRTQTNLVDVIIPVAYFAVRAILAVMIQTTTHGLVSSLVGSLLFSLAYYGLSAWGKCLANK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6872; Mature: 6872
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRTQTNLVDVIIPVAYFAVRAILAVMIQTTTHGLVSSLVGSLLFSLAYYGLSAWGKCL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANK CCC >Mature Secondary Structure MRKRTQTNLVDVIIPVAYFAVRAILAVMIQTTTHGLVSSLVGSLLFSLAYYGLSAWGKCL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA