| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377298
Identifier: 28377298
GI number: 28377298
Start: 353648
End: 354034
Strand: Direct
Name: 28377298
Synonym: lp_0385
Alternate gene names: NA
Gene position: 353648-354034 (Clockwise)
Preceding gene: 28377297
Following gene: 28377299
Centisome position: 10.69
GC content: 28.94
Gene sequence:
>387_bases ATGAATATAGAAGAAATCAACTCAGAAATATTAAAGGTTAACAATTATTTAAAAAAATGTTTATGGATGGATTTTGAATT TGCTAGTGTGGATGGTGGAGATATTGTTGCAGCAGGTAGAATAGATACTTCATATGATGAGTTTGCTATTAACATTGATT TCAGGAAACCTTATTATCTGTCTAGTTTGCTGTATTGGAACTTAAATAATTCTAAGCCATTTATAGAGTTGGTAGCAGGC AAAGAAATGTGGAAAGTCATCGATAAATACCAAGTAGAAGAAGGAAATTATATATTTAAGATTAATGCTGAAGATTTTGA CACAGCACCAATAATTATTGCTAGTAAAGGTCTTAAAGCTGAAATAATAAATAAAGATCCATTTTAA
Upstream 100 bases:
>100_bases AAGAGTTCCATAAAGGTGGTAAGCCTAATCCAGATTTTAATCCTAAAGCTTCTAAGAATACCCATATCCCTGTCGGTAAA TAGAGAAAGAGTAGAGAAAT
Downstream 100 bases:
>100_bases AAACAAGAATCCCTGAGTTATTAAATCAAGTACAATACTTTCAACTCGTTCTTAATCAGGATTTTAGCTAATTAGCCCAT TCCAGATGGCTTTGGATAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MNIEEINSEILKVNNYLKKCLWMDFEFASVDGGDIVAAGRIDTSYDEFAINIDFRKPYYLSSLLYWNLNNSKPFIELVAG KEMWKVIDKYQVEEGNYIFKINAEDFDTAPIIIASKGLKAEIINKDPF
Sequences:
>Translated_128_residues MNIEEINSEILKVNNYLKKCLWMDFEFASVDGGDIVAAGRIDTSYDEFAINIDFRKPYYLSSLLYWNLNNSKPFIELVAG KEMWKVIDKYQVEEGNYIFKINAEDFDTAPIIIASKGLKAEIINKDPF >Mature_128_residues MNIEEINSEILKVNNYLKKCLWMDFEFASVDGGDIVAAGRIDTSYDEFAINIDFRKPYYLSSLLYWNLNNSKPFIELVAG KEMWKVIDKYQVEEGNYIFKINAEDFDTAPIIIASKGLKAEIINKDPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14804; Mature: 14804
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIEEINSEILKVNNYLKKCLWMDFEFASVDGGDIVAAGRIDTSYDEFAINIDFRKPYYL CCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCCCEEEEEEECCCCCEE SSLLYWNLNNSKPFIELVAGKEMWKVIDKYQVEEGNYIFKINAEDFDTAPIIIASKGLKA EEEEEEEECCCCCEEEEECCHHHHHHHHHEEECCCCEEEEEECCCCCCCCEEEECCCCEE EIINKDPF EECCCCCC >Mature Secondary Structure MNIEEINSEILKVNNYLKKCLWMDFEFASVDGGDIVAAGRIDTSYDEFAINIDFRKPYYL CCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCCCEEEEEEECCCCCEE SSLLYWNLNNSKPFIELVAGKEMWKVIDKYQVEEGNYIFKINAEDFDTAPIIIASKGLKA EEEEEEEECCCCCEEEEECCHHHHHHHHHEEECCCCEEEEEECCCCCCCCEEEECCCCEE EIINKDPF EECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA