Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

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The map label for this gene is 28377300

Identifier: 28377300

GI number: 28377300

Start: 355101

End: 355508

Strand: Direct

Name: 28377300

Synonym: lp_0388

Alternate gene names: NA

Gene position: 355101-355508 (Clockwise)

Preceding gene: 28377299

Following gene: 28377301

Centisome position: 10.73

GC content: 28.92

Gene sequence:

>408_bases
ATGTTTAAACTGTCAACAGAAGATTTGAAAATTTACATATTAGAAAGAGTTTCCAGGTTGGGAAATATTAATATTAAAGA
GTACAATTTTTTGGAAAACAAGCATGGAAGTGAAGATGGCTTTTATATTTATTCGGATGGTCAGCGATATCATTTTGTGT
ATAGTGAGCGAGGAACAGAAAATAAGCATAATGTGACAGATAATCTTTTTGAGATAGCATATTGGGTTATTAGTTCTATT
ACAGATACGTTAGCAATAAGATATGTGAGAACGCGCGTTTTACCAAATCAAAGTCAAAGAAAAATTATTTTTGATAAAAA
ATTAAGTCTGTTAAGTATAGTAGGTGAAAATTATAAGAAAGCTGGAGAAATAGAAATTAGTGAAATATTGAAAACATCTC
CTTTATAG

Upstream 100 bases:

>100_bases
GGTATGCCAAGTGGGGGAATTTAAAGCAAACTTTCTATGTCTATTGAAGAACTTGTTAAGGGAGGATATATTGAGTTAAT
AACAAAATAGGAGTGGTGTA

Downstream 100 bases:

>100_bases
GTATCCTGAACTGCCGGATTAAGTACAAACTTTCAGACTAAGCAAGTAATCTAGTTAATCAAAGTCTGGTAGCAATCTTA
TTGCTAATTAGTAACTAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MFKLSTEDLKIYILERVSRLGNINIKEYNFLENKHGSEDGFYIYSDGQRYHFVYSERGTENKHNVTDNLFEIAYWVISSI
TDTLAIRYVRTRVLPNQSQRKIIFDKKLSLLSIVGENYKKAGEIEISEILKTSPL

Sequences:

>Translated_135_residues
MFKLSTEDLKIYILERVSRLGNINIKEYNFLENKHGSEDGFYIYSDGQRYHFVYSERGTENKHNVTDNLFEIAYWVISSI
TDTLAIRYVRTRVLPNQSQRKIIFDKKLSLLSIVGENYKKAGEIEISEILKTSPL
>Mature_135_residues
MFKLSTEDLKIYILERVSRLGNINIKEYNFLENKHGSEDGFYIYSDGQRYHFVYSERGTENKHNVTDNLFEIAYWVISSI
TDTLAIRYVRTRVLPNQSQRKIIFDKKLSLLSIVGENYKKAGEIEISEILKTSPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15831; Mature: 15831

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKLSTEDLKIYILERVSRLGNINIKEYNFLENKHGSEDGFYIYSDGQRYHFVYSERGTE
CCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCEEEEECCCEEEEEEECCCCC
NKHNVTDNLFEIAYWVISSITDTLAIRYVRTRVLPNQSQRKIIFDKKLSLLSIVGENYKK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCCCC
AGEIEISEILKTSPL
CCCEEHHHHHHCCCC
>Mature Secondary Structure
MFKLSTEDLKIYILERVSRLGNINIKEYNFLENKHGSEDGFYIYSDGQRYHFVYSERGTE
CCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCEEEEECCCEEEEEEECCCCC
NKHNVTDNLFEIAYWVISSITDTLAIRYVRTRVLPNQSQRKIIFDKKLSLLSIVGENYKK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCCCC
AGEIEISEILKTSPL
CCCEEHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA