| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377276
Identifier: 28377276
GI number: 28377276
Start: 328083
End: 328538
Strand: Direct
Name: 28377276
Synonym: lp_0361
Alternate gene names: NA
Gene position: 328083-328538 (Clockwise)
Preceding gene: 28377275
Following gene: 28377277
Centisome position: 9.92
GC content: 44.96
Gene sequence:
>456_bases TTGAAAAATAAGGCGATTTTCGTTAATAACCTTAATTTGAAACGGGTTTGCCATTCAGGATTGTCAGGGCTAATTATCGG TGCTATCTTAGATGTCATTATGAAAGTGGCATTGAGATTGAAAGGGGCCTTGGCAATGACAGCACGGTTAGTGTTAATTC ATGAAGTTGGTCGTTATCGAGAATTATCGGAACAACGGTACTGGTTAGAATCCGCCGATTTTTGGGGTGTCGATGGGCGT GGCGCGACGGTCAATGAGGCCATCGGTAACTTTTTGACCAACCTCGTGCAATATTGCCGCGACTATTACCAACGCGGCTT GTGGCAACTTGATGATCGGTTGTTACAGCTAGATCACGTTGATACAGTGTTAGCGTACGCGCAGGCAGGTAAGTCACCAG CACCATTATTTTTGTTTAAATTAGTTCCGGCGGATCATGAGTTGGCGTCTGCTTAA
Upstream 100 bases:
>100_bases TCAGTTTACGATGGCTGATTTACAAGCCGACCTGAACCACCACGGTACGTTTTTACAACACGAACAAGATTCAGAATCTT AAGTAAAAAGCGTTACTTGA
Downstream 100 bases:
>100_bases TCGAAATATTGACGAATTCTTAAAGAAGCGTTCATACTTCCACCACACTCCTGCGCTAAACTATGCGGTATAATCAAAGC GTAAATTAATTGGAGGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MKNKAIFVNNLNLKRVCHSGLSGLIIGAILDVIMKVALRLKGALAMTARLVLIHEVGRYRELSEQRYWLESADFWGVDGR GATVNEAIGNFLTNLVQYCRDYYQRGLWQLDDRLLQLDHVDTVLAYAQAGKSPAPLFLFKLVPADHELASA
Sequences:
>Translated_151_residues MKNKAIFVNNLNLKRVCHSGLSGLIIGAILDVIMKVALRLKGALAMTARLVLIHEVGRYRELSEQRYWLESADFWGVDGR GATVNEAIGNFLTNLVQYCRDYYQRGLWQLDDRLLQLDHVDTVLAYAQAGKSPAPLFLFKLVPADHELASA >Mature_151_residues MKNKAIFVNNLNLKRVCHSGLSGLIIGAILDVIMKVALRLKGALAMTARLVLIHEVGRYRELSEQRYWLESADFWGVDGR GATVNEAIGNFLTNLVQYCRDYYQRGLWQLDDRLLQLDHVDTVLAYAQAGKSPAPLFLFKLVPADHELASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16958; Mature: 16958
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKAIFVNNLNLKRVCHSGLSGLIIGAILDVIMKVALRLKGALAMTARLVLIHEVGRYR CCCCEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELSEQRYWLESADFWGVDGRGATVNEAIGNFLTNLVQYCRDYYQRGLWQLDDRLLQLDHV HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DTVLAYAQAGKSPAPLFLFKLVPADHELASA HHHHHHHHCCCCCCCEEEEEECCCCHHHCCC >Mature Secondary Structure MKNKAIFVNNLNLKRVCHSGLSGLIIGAILDVIMKVALRLKGALAMTARLVLIHEVGRYR CCCCEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELSEQRYWLESADFWGVDGRGATVNEAIGNFLTNLVQYCRDYYQRGLWQLDDRLLQLDHV HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DTVLAYAQAGKSPAPLFLFKLVPADHELASA HHHHHHHHCCCCCCCEEEEEECCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA