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The map label for this gene is 28377275

Identifier: 28377275

GI number: 28377275

Start: 327579

End: 328064

Strand: Direct

Name: 28377275

Synonym: lp_0360

Alternate gene names: NA

Gene position: 327579-328064 (Clockwise)

Preceding gene: 28377272

Following gene: 28377276

Centisome position: 9.9

GC content: 45.88

Gene sequence:

>486_bases
GTGGGAGGAAGTAACATGAAACTTGATTTTTCGGTGGCGGTGCATAGTATCCTGTACCTCGATGCACACCGTGATAGTAA
GGTCGCTAGTCGGGAACTCGCGCAGTCACTGCATCTTAACCCGGTGATGATTCGCAATATTTTATCAGTTCTACATAAGC
ATGGGTATTTAACGGGGACGGTTGGTAAAAATGGGGGCTACCAATTAGACTTGGCGTTGGCCGATATGAACCTCGGCGAT
CTATATGATTTGACCATCCCGCCAACAATTAGCTATGCGCGCTTCATTACGGGACCATCCAAAACGGATGAACAGGCTGA
TCAATCCCCGATTGCGGCCAATATTAGTGAAACGTTGACGGATTTATTTACAGTAGCTGACCGTCAATATCGGGCTTACT
ATCATCAGTTTACGATGGCTGATTTACAAGCCGACCTGAACCACCACGGTACGTTTTTACAACACGAACAAGATTCAGAA
TCTTAA

Upstream 100 bases:

>100_bases
TGACATATTTTTTCACTCCCAAACACATTATACCTGCATATTGGGGCTAATTGAAATGAGAGTCATTACAGTTGGTGGTA
GAATAGAATTATGACAAAGT

Downstream 100 bases:

>100_bases
GTAAAAAGCGTTACTTGATTGAAAAATAAGGCGATTTTCGTTAATAACCTTAATTTGAAACGGGTTTGCCATTCAGGATT
GTCAGGGCTAATTATCGGTG

Product: transcription regulator (putative)

Products: NA

Alternate protein names: Transcription Regulator; LOW QUALITY PROTEIN Transcriptional Regulator; Rrf2 Family Protein; Transcriptional Regulator BadM/Rrf2 Family

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MGGSNMKLDFSVAVHSILYLDAHRDSKVASRELAQSLHLNPVMIRNILSVLHKHGYLTGTVGKNGGYQLDLALADMNLGD
LYDLTIPPTISYARFITGPSKTDEQADQSPIAANISETLTDLFTVADRQYRAYYHQFTMADLQADLNHHGTFLQHEQDSE
S

Sequences:

>Translated_161_residues
MGGSNMKLDFSVAVHSILYLDAHRDSKVASRELAQSLHLNPVMIRNILSVLHKHGYLTGTVGKNGGYQLDLALADMNLGD
LYDLTIPPTISYARFITGPSKTDEQADQSPIAANISETLTDLFTVADRQYRAYYHQFTMADLQADLNHHGTFLQHEQDSE
S
>Mature_160_residues
GGSNMKLDFSVAVHSILYLDAHRDSKVASRELAQSLHLNPVMIRNILSVLHKHGYLTGTVGKNGGYQLDLALADMNLGDL
YDLTIPPTISYARFITGPSKTDEQADQSPIAANISETLTDLFTVADRQYRAYYHQFTMADLQADLNHHGTFLQHEQDSES

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17894; Mature: 17763

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: PS00148 ARGINASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGSNMKLDFSVAVHSILYLDAHRDSKVASRELAQSLHLNPVMIRNILSVLHKHGYLTGT
CCCCCEEEEHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEE
VGKNGGYQLDLALADMNLGDLYDLTIPPTISYARFITGPSKTDEQADQSPIAANISETLT
CCCCCCEEEEEEEECCCCCCEEEECCCCCCCHHHEECCCCCCCCCCCCCCCCCCHHHHHH
DLFTVADRQYRAYYHQFTMADLQADLNHHGTFLQHEQDSES
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC
>Mature Secondary Structure 
GGSNMKLDFSVAVHSILYLDAHRDSKVASRELAQSLHLNPVMIRNILSVLHKHGYLTGT
CCCCEEEEHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEE
VGKNGGYQLDLALADMNLGDLYDLTIPPTISYARFITGPSKTDEQADQSPIAANISETLT
CCCCCCEEEEEEEECCCCCCEEEECCCCCCCHHHEECCCCCCCCCCCCCCCCCCHHHHHH
DLFTVADRQYRAYYHQFTMADLQADLNHHGTFLQHEQDSES
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA