| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28211627
Identifier: 28211627
GI number: 28211627
Start: 2132829
End: 2133563
Strand: Direct
Name: 28211627
Synonym: CTC02003
Alternate gene names: NA
Gene position: 2132829-2133563 (Clockwise)
Preceding gene: 28211624
Following gene: 28211636
Centisome position: 76.19
GC content: 27.07
Gene sequence:
>735_bases GTGATTATTTTGAGTAATACAAAGCTTAAAAGTTTGGGCAAAAATTATTTAGGAGAAAATATACTGTTTAGTGAAAACGA CACTAATAAAATTTATGATGAAATAACAGCTATCCTTATGTCAGAAATATATAATAACCAATTAAGTGTAAGCAAAGGTA AAGAAATTTTAAATAAAATATATAAATTATATGATAAAGGCAATGAACAATTTGAAAATTACGCCTCCTGTAAAAAGGGT TGTGGGGATTGCTGTTGTCTTTATGTAGACTGTACTGCAATAGAAGCAGAGCTTATTCGCGATTATGTACAAGCTAATTT TTCAGATTATGATAAAAACCTTTTCATATCAAAAATTAGGGAGATATTATCAATGATTCCATCTCCAGATGAAGTAAAAA AAGATGATAAAATTACATCCGATTATTTAAATAAAAAGATACCTTGTGTGTTTTTATCTGATGAAAAAACCTGTTTAGTA TATTCCGTAAGACCCTTTAATTGTAGAAAATTTCTATCCATAAGTTCCCCAGACAAATGTAATATAGGAGAACAAGTAAA TAAAATTAATCCTTCTATTAATAATATAGGTATATTAAGTATAAATGTATTATCCACATCTGTTATGCGATATAGAAGGT TAATAGATGAAAATAGTACAGACTTTGAATCATTACATAGAGCAATACCTTTATGGTTGCAACATGGTTTTGATGAAATA TATAGATTGAAATGA
Upstream 100 bases:
>100_bases TCACATATTTAGATATTTTTCAACAAAATTCAAAATACATTTTGAATATAATTTTCATATATTGTAAAATTTTTAGTTTT ATACTATAATCCTTCCAGAG
Downstream 100 bases:
>100_bases AAGGGCAGATTTCTCTGCCTTTTTACCTTAATCTATCTCTGTTTTCTTAAAATCATTTTTTATTCTTAAAAATTGTTCCA TATCATTTAAAAATTGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MIILSNTKLKSLGKNYLGENILFSENDTNKIYDEITAILMSEIYNNQLSVSKGKEILNKIYKLYDKGNEQFENYASCKKG CGDCCCLYVDCTAIEAELIRDYVQANFSDYDKNLFISKIREILSMIPSPDEVKKDDKITSDYLNKKIPCVFLSDEKTCLV YSVRPFNCRKFLSISSPDKCNIGEQVNKINPSINNIGILSINVLSTSVMRYRRLIDENSTDFESLHRAIPLWLQHGFDEI YRLK
Sequences:
>Translated_244_residues MIILSNTKLKSLGKNYLGENILFSENDTNKIYDEITAILMSEIYNNQLSVSKGKEILNKIYKLYDKGNEQFENYASCKKG CGDCCCLYVDCTAIEAELIRDYVQANFSDYDKNLFISKIREILSMIPSPDEVKKDDKITSDYLNKKIPCVFLSDEKTCLV YSVRPFNCRKFLSISSPDKCNIGEQVNKINPSINNIGILSINVLSTSVMRYRRLIDENSTDFESLHRAIPLWLQHGFDEI YRLK >Mature_244_residues MIILSNTKLKSLGKNYLGENILFSENDTNKIYDEITAILMSEIYNNQLSVSKGKEILNKIYKLYDKGNEQFENYASCKKG CGDCCCLYVDCTAIEAELIRDYVQANFSDYDKNLFISKIREILSMIPSPDEVKKDDKITSDYLNKKIPCVFLSDEKTCLV YSVRPFNCRKFLSISSPDKCNIGEQVNKINPSINNIGILSINVLSTSVMRYRRLIDENSTDFESLHRAIPLWLQHGFDEI YRLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28088; Mature: 28088
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIILSNTKLKSLGKNYLGENILFSENDTNKIYDEITAILMSEIYNNQLSVSKGKEILNKI CEEECCCHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH YKLYDKGNEQFENYASCKKGCGDCCCLYVDCTAIEAELIRDYVQANFSDYDKNLFISKIR HHHHHCCCHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH EILSMIPSPDEVKKDDKITSDYLNKKIPCVFLSDEKTCLVYSVRPFNCRKFLSISSPDKC HHHHHCCCCHHHCCCCCHHHHHHCCCCCEEEECCCCEEEEEEECCCCCHHHCCCCCCCCC NIGEQVNKINPSINNIGILSINVLSTSVMRYRRLIDENSTDFESLHRAIPLWLQHGFDEI CCHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHH YRLK HCCC >Mature Secondary Structure MIILSNTKLKSLGKNYLGENILFSENDTNKIYDEITAILMSEIYNNQLSVSKGKEILNKI CEEECCCHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH YKLYDKGNEQFENYASCKKGCGDCCCLYVDCTAIEAELIRDYVQANFSDYDKNLFISKIR HHHHHCCCHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH EILSMIPSPDEVKKDDKITSDYLNKKIPCVFLSDEKTCLVYSVRPFNCRKFLSISSPDKC HHHHHCCCCHHHCCCCCHHHHHHCCCCCEEEECCCCEEEEEEECCCCCHHHCCCCCCCCC NIGEQVNKINPSINNIGILSINVLSTSVMRYRRLIDENSTDFESLHRAIPLWLQHGFDEI CCHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHH YRLK HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA