Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is cotI [H]

Identifier: 28211636

GI number: 28211636

Start: 2142648

End: 2143715

Strand: Direct

Name: cotI [H]

Synonym: CTC02013

Alternate gene names: 28211636

Gene position: 2142648-2143715 (Clockwise)

Preceding gene: 28211627

Following gene: 28211665

Centisome position: 76.54

GC content: 25.0

Gene sequence:

>1068_bases
ATGTCAAGCATTACTAATGCATCTGATTTACAACTTTTGTCTGAAGAAAATGTACGATTAAATGTATTAAAGCATTATAA
TCTAGAAAATTCAATAGTAACACAAATAAAATTTAAAAACACTGATAAGCAAAGAGCAGTTTATAAAGTAAGCCATGGCT
CTAAAAACTATTGTCTTAAGAAAGTATACTTCCCTGAAGAAGAATTATTATTCGTATATTCAGCTATAGAATGGATGCAT
AGATATAATATAAAAGTTCCAAGAATATTGCCTACTTTAGAAAGTAATAGATTTGTTAATTATGAAAATATGTTATTTAT
ATTAACTCCATGGATAGAAGGATGTAAATGCGACTATGATAATCCTATTCATGTGACTAGATCCACAGAAAATCTATCTT
TAATGCACCATCATTCAAGTAAATTTTTCCCAATACTTGGTAGTGATAATCGTGAGAAATTTGATAATGTTTATGACACT
ACAGAAAAACGATTTAATCAACTTTTAGAATGTTCTAATTTAGCTTTTAAATATAAAGATAAATTTTCAAAATACTTTTT
AAGTCATTTTGATGCTAATCTAAATACTGCTAAAAACATACTGGCTTTATCTTGTACAATCAATCACAATAATCTTCAAA
AAAATTTATGTCATTTAGATTATGTAAATAAAAACATTATATTAGATAATAATAATAACGTTTGGGTTATTGATTTTGAT
AAATGTAGAATAGATTACCGTGTACACGATATAGGATACTTCATGAGAAGATATTTGCGTAGGGATAATACCAGTTGGGA
TGTTAAAAAAGCCATAGAATGTATAGAAATCTATGAGGGTATAAATCCTTTAAATTTAGATGAACATAAATATATTCTGT
GTTATATAGGATTTCCTCAAAAGTTTTGGAAAATATCTAGAGATTATTATAGAAATATAAAAAGATGCAATAAAAATTCT
TTCTTCAAAGTTTTAACTAGTTCCATAGAAAAGGAAAAAGAACAAGATGATTTTGTTATTGATTTCTTAAAATATATAGA
GGATAAATTTAATATAAAATTATCTTAA

Upstream 100 bases:

>100_bases
AATCCATAAGAGTATGTAAGCTTTAATACTAACTATTATGTATATTCCAGGGATCTTTTTAATATTATTATACAGAGATA
AATAATAAAGGAGTTTTGTT

Downstream 100 bases:

>100_bases
GTATAGATAGGTTAGCTTTTTTATGCTAACCCCTTTATTTTATTAAAAAACAAACGTCAGACAGAGTACTTTTCCATCTG
ACGTAAATTTCATTTTATTT

Product: spore coat protein S

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MSSITNASDLQLLSEENVRLNVLKHYNLENSIVTQIKFKNTDKQRAVYKVSHGSKNYCLKKVYFPEEELLFVYSAIEWMH
RYNIKVPRILPTLESNRFVNYENMLFILTPWIEGCKCDYDNPIHVTRSTENLSLMHHHSSKFFPILGSDNREKFDNVYDT
TEKRFNQLLECSNLAFKYKDKFSKYFLSHFDANLNTAKNILALSCTINHNNLQKNLCHLDYVNKNIILDNNNNVWVIDFD
KCRIDYRVHDIGYFMRRYLRRDNTSWDVKKAIECIEIYEGINPLNLDEHKYILCYIGFPQKFWKISRDYYRNIKRCNKNS
FFKVLTSSIEKEKEQDDFVIDFLKYIEDKFNIKLS

Sequences:

>Translated_355_residues
MSSITNASDLQLLSEENVRLNVLKHYNLENSIVTQIKFKNTDKQRAVYKVSHGSKNYCLKKVYFPEEELLFVYSAIEWMH
RYNIKVPRILPTLESNRFVNYENMLFILTPWIEGCKCDYDNPIHVTRSTENLSLMHHHSSKFFPILGSDNREKFDNVYDT
TEKRFNQLLECSNLAFKYKDKFSKYFLSHFDANLNTAKNILALSCTINHNNLQKNLCHLDYVNKNIILDNNNNVWVIDFD
KCRIDYRVHDIGYFMRRYLRRDNTSWDVKKAIECIEIYEGINPLNLDEHKYILCYIGFPQKFWKISRDYYRNIKRCNKNS
FFKVLTSSIEKEKEQDDFVIDFLKYIEDKFNIKLS
>Mature_354_residues
SSITNASDLQLLSEENVRLNVLKHYNLENSIVTQIKFKNTDKQRAVYKVSHGSKNYCLKKVYFPEEELLFVYSAIEWMHR
YNIKVPRILPTLESNRFVNYENMLFILTPWIEGCKCDYDNPIHVTRSTENLSLMHHHSSKFFPILGSDNREKFDNVYDTT
EKRFNQLLECSNLAFKYKDKFSKYFLSHFDANLNTAKNILALSCTINHNNLQKNLCHLDYVNKNIILDNNNNVWVIDFDK
CRIDYRVHDIGYFMRRYLRRDNTSWDVKKAIECIEIYEGINPLNLDEHKYILCYIGFPQKFWKISRDYYRNIKRCNKNSF
FKVLTSSIEKEKEQDDFVIDFLKYIEDKFNIKLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Spore wall, spore coat [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CotS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009
- InterPro:   IPR014255 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 42572; Mature: 42441

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSITNASDLQLLSEENVRLNVLKHYNLENSIVTQIKFKNTDKQRAVYKVSHGSKNYCLK
CCCCCCCHHHHEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCCCCEEE
KVYFPEEELLFVYSAIEWMHRYNIKVPRILPTLESNRFVNYENMLFILTPWIEGCKCDYD
EEECCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEECCEEEEEECCCCCCCCCCC
NPIHVTRSTENLSLMHHHSSKFFPILGSDNREKFDNVYDTTEKRFNQLLECSNLAFKYKD
CCEEEEECCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
KFSKYFLSHFDANLNTAKNILALSCTINHNNLQKNLCHLDYVNKNIILDNNNNVWVIDFD
HHHHHHHHHHCCCCCCCCCEEEEEEEEECCCHHHHHHEEEECCCEEEEECCCCEEEEEEC
KCRIDYRVHDIGYFMRRYLRRDNTSWDVKKAIECIEIYEGINPLNLDEHKYILCYIGFPQ
CEEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCH
KFWKISRDYYRNIKRCNKNSFFKVLTSSIEKEKEQDDFVIDFLKYIEDKFNIKLS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEC
>Mature Secondary Structure 
SSITNASDLQLLSEENVRLNVLKHYNLENSIVTQIKFKNTDKQRAVYKVSHGSKNYCLK
CCCCCCHHHHEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCCCCEEE
KVYFPEEELLFVYSAIEWMHRYNIKVPRILPTLESNRFVNYENMLFILTPWIEGCKCDYD
EEECCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEEECCEEEEEECCCCCCCCCCC
NPIHVTRSTENLSLMHHHSSKFFPILGSDNREKFDNVYDTTEKRFNQLLECSNLAFKYKD
CCEEEEECCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
KFSKYFLSHFDANLNTAKNILALSCTINHNNLQKNLCHLDYVNKNIILDNNNNVWVIDFD
HHHHHHHHHHCCCCCCCCCEEEEEEEEECCCHHHHHHEEEECCCEEEEECCCCEEEEEEC
KCRIDYRVHDIGYFMRRYLRRDNTSWDVKKAIECIEIYEGINPLNLDEHKYILCYIGFPQ
CEEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCH
KFWKISRDYYRNIKRCNKNSFFKVLTSSIEKEKEQDDFVIDFLKYIEDKFNIKLS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7545510; 9387221; 9384377 [H]