BacMap

Definition	Clostridium tetani E88 chromosome, complete genome.
Accession	NC_004557
Length	2,799,251

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The map label for this gene is cshA [H]

Identifier: 28211624

GI number: 28211624

Start: 2128461

End: 2130035

Strand: Direct

Name: cshA [H]

Synonym: CTC01999

Alternate gene names: 28211624

Gene position: 2128461-2130035 (Clockwise)

Preceding gene: 28211622

Following gene: 28211627

Centisome position: 76.04

GC content: 29.21

Gene sequence:

>1575_bases
ATGGAAAATTTAAAATTTAATAATTTAGGACTTAACGAAGATATACTCAAAGCAATTGAAGATATGGGGTTTGAAACTCC
TTCTAAAATTCAAGCTGAGGTTATACCAATTGTTTTACAAGGATTTGATGTTATAGGTCAGGCTCAAACAGGTACTGGAA
AGACCCTTGCCTTCGGTGCTCCTGTTTTAAATAGTATTAGTAATGAATCTAAAAAAGTTAAGAGTATAATACTAGCTCCT
ACAAGAGAACTTGCTATTCAGGTATATAAAGAGCTTACAACTGTAGCAAAATACACTAAATTCAAATTGTTACCTGTATA
CGGAGGAGATTCCATAGACAGACAGATAAAAAGCTTAAAAAAAGGAATAGATATTGTAATAGGTACTCCTGGAAGAGTTC
AAGATTTAATCAATAGAAAAGCTCTTAATCTATCTCATATTGAATTTCTTGTTCTTGATGAGGCTGATGAAATGCTTAAT
ATGGGCTTTGTGGATGATATAGAAAATATATTAAAAAGTTGTAATGAAGATAGACGTACTTTATTATTTTCTGCAACAAT
GCCAAGTGAAATAAAGAAGATAGCTAAAAAGTATATGAAAAAAGATGCTAAGCATGTAGCTATAGCTCAAAATTCTATGA
CAGTATCTTCTGTTGAACAATTTTATTACGAAGTTAAACAAAAAAATAAATTTGAATCTTTATGCAAAGTACTTTCTGTT
GACGAACCAACTAGAGCTATAATATTTTGCAAAACTAAAAAAGGTGTAGATGAATTAGTATCATCTATGAAAGAAAAAGG
TTTTAGTGCAGAGGGAATGCATGGTGATATGACTCAAAGTCATAGATTAAATACTTTAAATAGATTTAAAGAAAGAACTA
TTCCTTTCCTTGTAGCCACTGATGTAGCTGCAAGAGGTATAGATGTTAAGGATACAAGTCATGTTATAAACTATGATTTA
CCTCAAGATACAGAATCCTATGTGCACAGAATTGGTAGAACAGGAAGAGCTAATAAAAAAGGTACAGCATATACTTTTGT
TACACCTAAAGAGTTTAGTTCTCTTAAAAGAATACAAAAAATAAGTAAAAGTAAAATAAATAAAAGACAATTACCTACTA
TGGATGATGTGCTAAAAGCTAAATTTGATAGTATATTAAATGATGTAGAACAAACTTTATCTAAGGATAATTATAATACT
TTTATACCTTTAGTTAAAGATTTGGAAAGCAAATTCGATCTAACAAATGTTACTGCTGCTTTAATGAGCATGTTATATAA
TGACGAAATTTCTTATGATTATGATGATGATAATACAGAGTCAAATTCCTTAGACTACACTAGAATATTCTTAAATGTAG
GTCGTAAGGATAGACTTAACCCTAAAATTCTATTAGAGTTTTTAGATAATAATGCTAATATAAATAAAAGCCAGGTTGGA
AGTATAGATATACTAGATAAATTTGCTTTTGTAGATATAGCAACAGATCGTGTCGGTGATTTAATGGATAACTGCATAGA
TAAAACATTATGTAGAAGAAAATTAAACATAGAAGTGGCCAAAAAATCTAAATAA

Upstream 100 bases:

>100_bases
ATTAAATTGCAATAGTTAATTTAATATTAAATATAGATTTACCCTTGTTAATTTTTACGTACTGTATTATAATAAATTGA
TTAGTTTGGAGGAATAATGA

Downstream 100 bases:

>100_bases
AAAACAAAGGACAGTTCAAAATGAATTGTCCTTTAATATTTACATTTTTTCTAGAATATCTTCTCCCATAGACATTAAAT
TAGGCTTTATTTTACATGCC

Product: ATP-dependent RNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MENLKFNNLGLNEDILKAIEDMGFETPSKIQAEVIPIVLQGFDVIGQAQTGTGKTLAFGAPVLNSISNESKKVKSIILAP
TRELAIQVYKELTTVAKYTKFKLLPVYGGDSIDRQIKSLKKGIDIVIGTPGRVQDLINRKALNLSHIEFLVLDEADEMLN
MGFVDDIENILKSCNEDRRTLLFSATMPSEIKKIAKKYMKKDAKHVAIAQNSMTVSSVEQFYYEVKQKNKFESLCKVLSV
DEPTRAIIFCKTKKGVDELVSSMKEKGFSAEGMHGDMTQSHRLNTLNRFKERTIPFLVATDVAARGIDVKDTSHVINYDL
PQDTESYVHRIGRTGRANKKGTAYTFVTPKEFSSLKRIQKISKSKINKRQLPTMDDVLKAKFDSILNDVEQTLSKDNYNT
FIPLVKDLESKFDLTNVTAALMSMLYNDEISYDYDDDNTESNSLDYTRIFLNVGRKDRLNPKILLEFLDNNANINKSQVG
SIDILDKFAFVDIATDRVGDLMDNCIDKTLCRRKLNIEVAKKSK

Sequences:

>Translated_524_residues
MENLKFNNLGLNEDILKAIEDMGFETPSKIQAEVIPIVLQGFDVIGQAQTGTGKTLAFGAPVLNSISNESKKVKSIILAP
TRELAIQVYKELTTVAKYTKFKLLPVYGGDSIDRQIKSLKKGIDIVIGTPGRVQDLINRKALNLSHIEFLVLDEADEMLN
MGFVDDIENILKSCNEDRRTLLFSATMPSEIKKIAKKYMKKDAKHVAIAQNSMTVSSVEQFYYEVKQKNKFESLCKVLSV
DEPTRAIIFCKTKKGVDELVSSMKEKGFSAEGMHGDMTQSHRLNTLNRFKERTIPFLVATDVAARGIDVKDTSHVINYDL
PQDTESYVHRIGRTGRANKKGTAYTFVTPKEFSSLKRIQKISKSKINKRQLPTMDDVLKAKFDSILNDVEQTLSKDNYNT
FIPLVKDLESKFDLTNVTAALMSMLYNDEISYDYDDDNTESNSLDYTRIFLNVGRKDRLNPKILLEFLDNNANINKSQVG
SIDILDKFAFVDIATDRVGDLMDNCIDKTLCRRKLNIEVAKKSK
>Mature_524_residues
MENLKFNNLGLNEDILKAIEDMGFETPSKIQAEVIPIVLQGFDVIGQAQTGTGKTLAFGAPVLNSISNESKKVKSIILAP
TRELAIQVYKELTTVAKYTKFKLLPVYGGDSIDRQIKSLKKGIDIVIGTPGRVQDLINRKALNLSHIEFLVLDEADEMLN
MGFVDDIENILKSCNEDRRTLLFSATMPSEIKKIAKKYMKKDAKHVAIAQNSMTVSSVEQFYYEVKQKNKFESLCKVLSV
DEPTRAIIFCKTKKGVDELVSSMKEKGFSAEGMHGDMTQSHRLNTLNRFKERTIPFLVATDVAARGIDVKDTSHVINYDL
PQDTESYVHRIGRTGRANKKGTAYTFVTPKEFSSLKRIQKISKSKINKRQLPTMDDVLKAKFDSILNDVEQTLSKDNYNT
FIPLVKDLESKFDLTNVTAALMSMLYNDEISYDYDDDNTESNSLDYTRIFLNVGRKDRLNPKILLEFLDNNANINKSQVG
SIDILDKFAFVDIATDRVGDLMDNCIDKTLCRRKLNIEVAKKSK

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=371, Percent_Identity=39.3530997304582, Blast_Score=291, Evalue=8e-79,
Organism=Homo sapiens, GI4758138, Length=385, Percent_Identity=37.4025974025974, Blast_Score=270, Evalue=2e-72,
Organism=Homo sapiens, GI20149629, Length=377, Percent_Identity=37.6657824933687, Blast_Score=267, Evalue=2e-71,
Organism=Homo sapiens, GI148613856, Length=367, Percent_Identity=36.5122615803815, Blast_Score=259, Evalue=3e-69,
Organism=Homo sapiens, GI38201710, Length=367, Percent_Identity=36.5122615803815, Blast_Score=259, Evalue=3e-69,
Organism=Homo sapiens, GI4503529, Length=372, Percent_Identity=38.4408602150538, Blast_Score=258, Evalue=6e-69,
Organism=Homo sapiens, GI222352149, Length=346, Percent_Identity=40.7514450867052, Blast_Score=256, Evalue=3e-68,
Organism=Homo sapiens, GI13129006, Length=392, Percent_Identity=38.0102040816327, Blast_Score=255, Evalue=7e-68,
Organism=Homo sapiens, GI83700235, Length=372, Percent_Identity=37.9032258064516, Blast_Score=253, Evalue=4e-67,
Organism=Homo sapiens, GI262118318, Length=350, Percent_Identity=38.2857142857143, Blast_Score=244, Evalue=1e-64,
Organism=Homo sapiens, GI45446747, Length=354, Percent_Identity=37.2881355932203, Blast_Score=244, Evalue=2e-64,
Organism=Homo sapiens, GI45446743, Length=354, Percent_Identity=37.2881355932203, Blast_Score=244, Evalue=2e-64,
Organism=Homo sapiens, GI216548263, Length=350, Percent_Identity=38.2857142857143, Blast_Score=243, Evalue=3e-64,
Organism=Homo sapiens, GI262231852, Length=350, Percent_Identity=38.2857142857143, Blast_Score=243, Evalue=4e-64,
Organism=Homo sapiens, GI13518015, Length=350, Percent_Identity=38.2857142857143, Blast_Score=243, Evalue=5e-64,
Organism=Homo sapiens, GI224593278, Length=385, Percent_Identity=36.6233766233766, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI50659095, Length=392, Percent_Identity=36.4795918367347, Blast_Score=240, Evalue=3e-63,
Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=35.5978260869565, Blast_Score=239, Evalue=6e-63,
Organism=Homo sapiens, GI301171467, Length=364, Percent_Identity=35.989010989011, Blast_Score=238, Evalue=9e-63,
Organism=Homo sapiens, GI169881239, Length=368, Percent_Identity=36.4130434782609, Blast_Score=238, Evalue=9e-63,
Organism=Homo sapiens, GI13514809, Length=368, Percent_Identity=36.4130434782609, Blast_Score=238, Evalue=9e-63,
Organism=Homo sapiens, GI87196351, Length=364, Percent_Identity=35.989010989011, Blast_Score=238, Evalue=9e-63,
Organism=Homo sapiens, GI41327771, Length=380, Percent_Identity=37.8947368421053, Blast_Score=237, Evalue=3e-62,
Organism=Homo sapiens, GI41327773, Length=352, Percent_Identity=37.7840909090909, Blast_Score=235, Evalue=6e-62,
Organism=Homo sapiens, GI55749865, Length=346, Percent_Identity=38.150289017341, Blast_Score=231, Evalue=2e-60,
Organism=Homo sapiens, GI164664518, Length=357, Percent_Identity=33.8935574229692, Blast_Score=229, Evalue=5e-60,
Organism=Homo sapiens, GI4758112, Length=346, Percent_Identity=35.2601156069364, Blast_Score=228, Evalue=7e-60,
Organism=Homo sapiens, GI18375623, Length=346, Percent_Identity=35.2601156069364, Blast_Score=228, Evalue=7e-60,
Organism=Homo sapiens, GI41327776, Length=377, Percent_Identity=34.4827586206897, Blast_Score=226, Evalue=5e-59,
Organism=Homo sapiens, GI21040371, Length=346, Percent_Identity=34.393063583815, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=35.3932584269663, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI6005743, Length=387, Percent_Identity=34.625322997416, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI8922886, Length=387, Percent_Identity=34.3669250645995, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI164419732, Length=377, Percent_Identity=33.42175066313, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI188035877, Length=347, Percent_Identity=32.2766570605187, Blast_Score=200, Evalue=3e-51,
Organism=Homo sapiens, GI31542656, Length=371, Percent_Identity=33.4231805929919, Blast_Score=200, Evalue=3e-51,
Organism=Homo sapiens, GI51094101, Length=354, Percent_Identity=30.7909604519774, Blast_Score=197, Evalue=3e-50,
Organism=Homo sapiens, GI164419743, Length=354, Percent_Identity=30.7909604519774, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI62241022, Length=371, Percent_Identity=35.0404312668464, Blast_Score=196, Evalue=5e-50,
Organism=Homo sapiens, GI256223453, Length=400, Percent_Identity=32, Blast_Score=196, Evalue=5e-50,
Organism=Homo sapiens, GI38569503, Length=348, Percent_Identity=32.7586206896552, Blast_Score=195, Evalue=8e-50,
Organism=Homo sapiens, GI13514831, Length=417, Percent_Identity=31.6546762589928, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI38569505, Length=348, Percent_Identity=32.7586206896552, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI41327779, Length=364, Percent_Identity=33.5164835164835, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI38327634, Length=364, Percent_Identity=32.967032967033, Blast_Score=189, Evalue=4e-48,
Organism=Homo sapiens, GI62241024, Length=348, Percent_Identity=34.4827586206897, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI17505907, Length=433, Percent_Identity=27.7136258660508, Blast_Score=159, Evalue=7e-39,
Organism=Homo sapiens, GI4826686, Length=337, Percent_Identity=32.9376854599407, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI256773275, Length=411, Percent_Identity=27.2506082725061, Blast_Score=155, Evalue=6e-38,
Organism=Homo sapiens, GI9506931, Length=409, Percent_Identity=25.9168704156479, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI9966805, Length=320, Percent_Identity=31.875, Blast_Score=153, Evalue=5e-37,
Organism=Homo sapiens, GI20336298, Length=203, Percent_Identity=33.9901477832512, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI154759257, Length=174, Percent_Identity=31.6091954022989, Blast_Score=77, Evalue=4e-14,
Organism=Escherichia coli, GI87082221, Length=425, Percent_Identity=41.4117647058824, Blast_Score=343, Evalue=1e-95,
Organism=Escherichia coli, GI1787016, Length=390, Percent_Identity=38.2051282051282, Blast_Score=288, Evalue=8e-79,
Organism=Escherichia coli, GI1787605, Length=359, Percent_Identity=38.1615598885794, Blast_Score=256, Evalue=3e-69,
Organism=Escherichia coli, GI1790214, Length=383, Percent_Identity=36.8146214099217, Blast_Score=249, Evalue=2e-67,
Organism=Escherichia coli, GI1788930, Length=358, Percent_Identity=37.1508379888268, Blast_Score=224, Evalue=1e-59,
Organism=Escherichia coli, GI48994977, Length=368, Percent_Identity=22.2826086956522, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71987143, Length=364, Percent_Identity=42.032967032967, Blast_Score=312, Evalue=2e-85,
Organism=Caenorhabditis elegans, GI71995724, Length=364, Percent_Identity=40.1098901098901, Blast_Score=290, Evalue=1e-78,
Organism=Caenorhabditis elegans, GI17507121, Length=364, Percent_Identity=39.8351648351648, Blast_Score=290, Evalue=1e-78,
Organism=Caenorhabditis elegans, GI17537549, Length=374, Percent_Identity=39.8395721925134, Blast_Score=266, Evalue=2e-71,
Organism=Caenorhabditis elegans, GI17555296, Length=355, Percent_Identity=38.0281690140845, Blast_Score=257, Evalue=1e-68,
Organism=Caenorhabditis elegans, GI115533224, Length=347, Percent_Identity=40.3458213256484, Blast_Score=256, Evalue=1e-68,
Organism=Caenorhabditis elegans, GI32565321, Length=378, Percent_Identity=38.8888888888889, Blast_Score=253, Evalue=2e-67,
Organism=Caenorhabditis elegans, GI86570094, Length=355, Percent_Identity=39.1549295774648, Blast_Score=246, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI71995718, Length=368, Percent_Identity=36.1413043478261, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI17510309, Length=366, Percent_Identity=36.0655737704918, Blast_Score=231, Evalue=8e-61,
Organism=Caenorhabditis elegans, GI17510307, Length=366, Percent_Identity=36.0655737704918, Blast_Score=231, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17552114, Length=365, Percent_Identity=32.0547945205479, Blast_Score=231, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI71995514, Length=366, Percent_Identity=36.0655737704918, Blast_Score=230, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI17552642, Length=394, Percent_Identity=34.5177664974619, Blast_Score=221, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI115532546, Length=405, Percent_Identity=32.8395061728395, Blast_Score=221, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17507945, Length=354, Percent_Identity=37.5706214689266, Blast_Score=221, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17510559, Length=422, Percent_Identity=32.2274881516588, Blast_Score=221, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI115532548, Length=381, Percent_Identity=33.5958005249344, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI71982858, Length=346, Percent_Identity=34.393063583815, Blast_Score=218, Evalue=8e-57,
Organism=Caenorhabditis elegans, GI17507877, Length=369, Percent_Identity=33.6043360433604, Blast_Score=218, Evalue=8e-57,
Organism=Caenorhabditis elegans, GI71999646, Length=354, Percent_Identity=32.2033898305085, Blast_Score=214, Evalue=7e-56,
Organism=Caenorhabditis elegans, GI71999644, Length=354, Percent_Identity=32.2033898305085, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17507881, Length=369, Percent_Identity=33.8753387533875, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17507879, Length=369, Percent_Identity=33.3333333333333, Blast_Score=209, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI17509811, Length=401, Percent_Identity=30.4239401496259, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI17553716, Length=359, Percent_Identity=32.3119777158774, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI193208216, Length=379, Percent_Identity=32.9815303430079, Blast_Score=190, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI193206561, Length=346, Percent_Identity=31.5028901734104, Blast_Score=190, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17536099, Length=369, Percent_Identity=34.6883468834688, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI17536101, Length=369, Percent_Identity=34.6883468834688, Blast_Score=185, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI17536103, Length=369, Percent_Identity=34.6883468834688, Blast_Score=180, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17505370, Length=399, Percent_Identity=29.8245614035088, Blast_Score=178, Evalue=7e-45,
Organism=Caenorhabditis elegans, GI17507641, Length=386, Percent_Identity=30.5699481865285, Blast_Score=176, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI17508543, Length=377, Percent_Identity=29.1777188328912, Blast_Score=165, Evalue=6e-41,
Organism=Caenorhabditis elegans, GI32564046, Length=373, Percent_Identity=30.0268096514745, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17556951, Length=344, Percent_Identity=29.9418604651163, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI71990816, Length=367, Percent_Identity=30.5177111716621, Blast_Score=155, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI25148203, Length=443, Percent_Identity=25.5079006772009, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI25148291, Length=364, Percent_Identity=27.4725274725275, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI71982862, Length=198, Percent_Identity=35.3535353535354, Blast_Score=129, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI25148205, Length=364, Percent_Identity=23.3516483516484, Blast_Score=105, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI71997889, Length=347, Percent_Identity=26.5129682997118, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71987152, Length=106, Percent_Identity=43.3962264150943, Blast_Score=99, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17557982, Length=386, Percent_Identity=24.6113989637306, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI32564293, Length=352, Percent_Identity=25.5681818181818, Blast_Score=75, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6320224, Length=366, Percent_Identity=38.2513661202186, Blast_Score=268, Evalue=2e-72,
Organism=Saccharomyces cerevisiae, GI6324217, Length=352, Percent_Identity=37.7840909090909, Blast_Score=257, Evalue=3e-69,
Organism=Saccharomyces cerevisiae, GI6324778, Length=376, Percent_Identity=36.7021276595745, Blast_Score=249, Evalue=6e-67,
Organism=Saccharomyces cerevisiae, GI6325138, Length=362, Percent_Identity=37.5690607734807, Blast_Score=248, Evalue=2e-66,
Organism=Saccharomyces cerevisiae, GI6321360, Length=358, Percent_Identity=38.268156424581, Blast_Score=241, Evalue=3e-64,
Organism=Saccharomyces cerevisiae, GI6322912, Length=370, Percent_Identity=36.2162162162162, Blast_Score=239, Evalue=6e-64,
Organism=Saccharomyces cerevisiae, GI6322323, Length=370, Percent_Identity=36.2162162162162, Blast_Score=239, Evalue=6e-64,
Organism=Saccharomyces cerevisiae, GI6321856, Length=365, Percent_Identity=36.4383561643836, Blast_Score=234, Evalue=2e-62,
Organism=Saccharomyces cerevisiae, GI6323021, Length=354, Percent_Identity=37.8531073446328, Blast_Score=229, Evalue=6e-61,
Organism=Saccharomyces cerevisiae, GI6320041, Length=355, Percent_Identity=34.0845070422535, Blast_Score=228, Evalue=1e-60,
Organism=Saccharomyces cerevisiae, GI6322427, Length=379, Percent_Identity=34.8284960422164, Blast_Score=223, Evalue=4e-59,
Organism=Saccharomyces cerevisiae, GI6324620, Length=367, Percent_Identity=36.5122615803815, Blast_Score=216, Evalue=6e-57,
Organism=Saccharomyces cerevisiae, GI6323947, Length=382, Percent_Identity=35.0785340314136, Blast_Score=213, Evalue=9e-56,
Organism=Saccharomyces cerevisiae, GI6320449, Length=371, Percent_Identity=36.9272237196765, Blast_Score=212, Evalue=1e-55,
Organism=Saccharomyces cerevisiae, GI6321963, Length=419, Percent_Identity=31.980906921241, Blast_Score=210, Evalue=4e-55,
Organism=Saccharomyces cerevisiae, GI6320119, Length=351, Percent_Identity=32.7635327635328, Blast_Score=208, Evalue=2e-54,
Organism=Saccharomyces cerevisiae, GI6319618, Length=440, Percent_Identity=31.5909090909091, Blast_Score=194, Evalue=3e-50,
Organism=Saccharomyces cerevisiae, GI6319714, Length=384, Percent_Identity=31.25, Blast_Score=185, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6321111, Length=373, Percent_Identity=33.7801608579088, Blast_Score=179, Evalue=7e-46,
Organism=Saccharomyces cerevisiae, GI6320400, Length=392, Percent_Identity=30.8673469387755, Blast_Score=168, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6321267, Length=354, Percent_Identity=33.6158192090396, Blast_Score=164, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6323306, Length=425, Percent_Identity=28.7058823529412, Blast_Score=155, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6320173, Length=188, Percent_Identity=37.7659574468085, Blast_Score=147, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6324366, Length=348, Percent_Identity=26.7241379310345, Blast_Score=127, Evalue=4e-30,
Organism=Saccharomyces cerevisiae, GI6321374, Length=395, Percent_Identity=26.3291139240506, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6322876, Length=184, Percent_Identity=34.2391304347826, Blast_Score=98, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6323844, Length=345, Percent_Identity=23.768115942029, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24645031, Length=371, Percent_Identity=39.0835579514825, Blast_Score=280, Evalue=1e-75,
Organism=Drosophila melanogaster, GI24582080, Length=364, Percent_Identity=39.8351648351648, Blast_Score=271, Evalue=6e-73,
Organism=Drosophila melanogaster, GI24582078, Length=364, Percent_Identity=39.8351648351648, Blast_Score=271, Evalue=6e-73,
Organism=Drosophila melanogaster, GI17136248, Length=364, Percent_Identity=39.8351648351648, Blast_Score=271, Evalue=6e-73,
Organism=Drosophila melanogaster, GI24582075, Length=364, Percent_Identity=39.8351648351648, Blast_Score=271, Evalue=6e-73,
Organism=Drosophila melanogaster, GI28574962, Length=356, Percent_Identity=38.4831460674157, Blast_Score=260, Evalue=1e-69,
Organism=Drosophila melanogaster, GI21355075, Length=358, Percent_Identity=40.2234636871508, Blast_Score=259, Evalue=3e-69,
Organism=Drosophila melanogaster, GI24585582, Length=361, Percent_Identity=37.9501385041551, Blast_Score=257, Evalue=2e-68,
Organism=Drosophila melanogaster, GI24584399, Length=352, Percent_Identity=38.9204545454545, Blast_Score=254, Evalue=1e-67,
Organism=Drosophila melanogaster, GI24642151, Length=355, Percent_Identity=37.4647887323944, Blast_Score=253, Evalue=2e-67,
Organism=Drosophila melanogaster, GI24644483, Length=356, Percent_Identity=38.2022471910112, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24644487, Length=356, Percent_Identity=38.2022471910112, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI45551833, Length=356, Percent_Identity=38.2022471910112, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24644485, Length=356, Percent_Identity=38.2022471910112, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI281361218, Length=356, Percent_Identity=38.2022471910112, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24644481, Length=356, Percent_Identity=38.2022471910112, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24644479, Length=356, Percent_Identity=38.2022471910112, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24584994, Length=379, Percent_Identity=38.2585751978892, Blast_Score=244, Evalue=1e-64,
Organism=Drosophila melanogaster, GI24662330, Length=358, Percent_Identity=37.4301675977654, Blast_Score=243, Evalue=2e-64,
Organism=Drosophila melanogaster, GI17985987, Length=371, Percent_Identity=36.6576819407008, Blast_Score=242, Evalue=4e-64,
Organism=Drosophila melanogaster, GI18857967, Length=364, Percent_Identity=35.4395604395604, Blast_Score=238, Evalue=5e-63,
Organism=Drosophila melanogaster, GI24583281, Length=356, Percent_Identity=33.7078651685393, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24583279, Length=356, Percent_Identity=33.7078651685393, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI21356161, Length=375, Percent_Identity=36, Blast_Score=227, Evalue=2e-59,
Organism=Drosophila melanogaster, GI24581954, Length=347, Percent_Identity=36.0230547550432, Blast_Score=219, Evalue=3e-57,
Organism=Drosophila melanogaster, GI24581952, Length=347, Percent_Identity=36.0230547550432, Blast_Score=219, Evalue=3e-57,
Organism=Drosophila melanogaster, GI24581956, Length=347, Percent_Identity=36.0230547550432, Blast_Score=219, Evalue=3e-57,
Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=35.1123595505618, Blast_Score=215, Evalue=5e-56,
Organism=Drosophila melanogaster, GI20130173, Length=528, Percent_Identity=28.030303030303, Blast_Score=212, Evalue=6e-55,
Organism=Drosophila melanogaster, GI28575014, Length=347, Percent_Identity=31.1239193083574, Blast_Score=207, Evalue=2e-53,
Organism=Drosophila melanogaster, GI281365720, Length=316, Percent_Identity=35.126582278481, Blast_Score=203, Evalue=3e-52,
Organism=Drosophila melanogaster, GI24666101, Length=349, Percent_Identity=32.0916905444126, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI17136814, Length=375, Percent_Identity=32.5333333333333, Blast_Score=196, Evalue=5e-50,
Organism=Drosophila melanogaster, GI21355559, Length=417, Percent_Identity=31.4148681055156, Blast_Score=189, Evalue=3e-48,
Organism=Drosophila melanogaster, GI17647335, Length=368, Percent_Identity=32.0652173913043, Blast_Score=186, Evalue=4e-47,
Organism=Drosophila melanogaster, GI28571808, Length=372, Percent_Identity=31.989247311828, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI28571809, Length=372, Percent_Identity=31.989247311828, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI24642822, Length=373, Percent_Identity=30.8310991957105, Blast_Score=169, Evalue=5e-42,
Organism=Drosophila melanogaster, GI24668515, Length=343, Percent_Identity=32.6530612244898, Blast_Score=155, Evalue=8e-38,
Organism=Drosophila melanogaster, GI24643725, Length=389, Percent_Identity=27.2493573264781, Blast_Score=145, Evalue=9e-35,
Organism=Drosophila melanogaster, GI24640164, Length=388, Percent_Identity=26.0309278350515, Blast_Score=132, Evalue=6e-31,
Organism=Drosophila melanogaster, GI19920478, Length=365, Percent_Identity=26.027397260274, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI28571338, Length=211, Percent_Identity=32.7014218009479, Blast_Score=126, Evalue=4e-29,
Organism=Drosophila melanogaster, GI18859659, Length=211, Percent_Identity=32.7014218009479, Blast_Score=126, Evalue=5e-29,
Organism=Drosophila melanogaster, GI17136666, Length=428, Percent_Identity=25.7009345794392, Blast_Score=118, Evalue=8e-27,
Organism=Drosophila melanogaster, GI62472181, Length=319, Percent_Identity=24.1379310344828, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24664230, Length=319, Percent_Identity=24.1379310344828, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 59144; Mature: 59144

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENLKFNNLGLNEDILKAIEDMGFETPSKIQAEVIPIVLQGFDVIGQAQTGTGKTLAFGA
CCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCEEEECC
PVLNSISNESKKVKSIILAPTRELAIQVYKELTTVAKYTKFKLLPVYGGDSIDRQIKSLK
HHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHH
KGIDIVIGTPGRVQDLINRKALNLSHIEFLVLDEADEMLNMGFVDDIENILKSCNEDRRT
CCCEEEECCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHCCCHHHHHHHHHHCCCCHHE
LLFSATMPSEIKKIAKKYMKKDAKHVAIAQNSMTVSSVEQFYYEVKQKNKFESLCKVLSV
EEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHCC
DEPTRAIIFCKTKKGVDELVSSMKEKGFSAEGMHGDMTQSHRLNTLNRFKERTIPFLVAT
CCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE
DVAARGIDVKDTSHVINYDLPQDTESYVHRIGRTGRANKKGTAYTFVTPKEFSSLKRIQK
HHHHCCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHH
ISKSKINKRQLPTMDDVLKAKFDSILNDVEQTLSKDNYNTFIPLVKDLESKFDLTNVTAA
HHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHH
LMSMLYNDEISYDYDDDNTESNSLDYTRIFLNVGRKDRLNPKILLEFLDNNANINKSQVG
HHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCHHHCC
SIDILDKFAFVDIATDRVGDLMDNCIDKTLCRRKLNIEVAKKSK
CHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHCCEEECCCCC
>Mature Secondary Structure
MENLKFNNLGLNEDILKAIEDMGFETPSKIQAEVIPIVLQGFDVIGQAQTGTGKTLAFGA
CCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCEEEECC
PVLNSISNESKKVKSIILAPTRELAIQVYKELTTVAKYTKFKLLPVYGGDSIDRQIKSLK
HHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHH
KGIDIVIGTPGRVQDLINRKALNLSHIEFLVLDEADEMLNMGFVDDIENILKSCNEDRRT
CCCEEEECCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHCCCHHHHHHHHHHCCCCHHE
LLFSATMPSEIKKIAKKYMKKDAKHVAIAQNSMTVSSVEQFYYEVKQKNKFESLCKVLSV
EEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHCC
DEPTRAIIFCKTKKGVDELVSSMKEKGFSAEGMHGDMTQSHRLNTLNRFKERTIPFLVAT
CCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE
DVAARGIDVKDTSHVINYDLPQDTESYVHRIGRTGRANKKGTAYTFVTPKEFSSLKRIQK
HHHHCCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHH
ISKSKINKRQLPTMDDVLKAKFDSILNDVEQTLSKDNYNTFIPLVKDLESKFDLTNVTAA
HHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHH
LMSMLYNDEISYDYDDDNTESNSLDYTRIFLNVGRKDRLNPKILLEFLDNNANINKSQVG
HHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCHHHCC
SIDILDKFAFVDIATDRVGDLMDNCIDKTLCRRKLNIEVAKKSK
CHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12721630 [H]