| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28211617
Identifier: 28211617
GI number: 28211617
Start: 2118985
End: 2119548
Strand: Direct
Name: 28211617
Synonym: CTC01992
Alternate gene names: NA
Gene position: 2118985-2119548 (Clockwise)
Preceding gene: 28211615
Following gene: 28211621
Centisome position: 75.7
GC content: 19.5
Gene sequence:
>564_bases ATGTGTACAATAGCTATAATAGATTTTAACAAATTTATATTGGGTAAAACTAATTGCACAAATATTATTTTACGGGATAA ATGGTTTGAGGAAAGTTCAATTATAAACTATAATTTAAATTCACAAAAACTTTATTTAATAACTAAAAATTGTATAAATA AAAGGAGTAAACTAACCATATGTTCTTTAAATAATAATTCTATTATTAATAAACAGAAATTTAATTTAAAAGATATATAT TTTGATATGAATATATTTGAATATAAAAACAAAGTGTATTCAGGTTCTAAAAAAATTGTTATATTTGAAAAATCTAAAGA TTTTAATCTTAAGATTGAAAACATTTTAGATAATAAAGACTGTTTTAATATAAATTTAAAAAATGTTTTGAATTTATGGG ATTATGAAATCATTGAAGAAGATAAGCTATTCATAGTATATGGCGATAATATAAGACCTATTACAAGTTGCATATATAAT AGATTAAATAATAGTGTTAAATATATTAAAGGAACTGTTGCTCCAGTATCTTTACGTAGTAAAGAACTAGTATTTATAGA ATAA
Upstream 100 bases:
>100_bases TAAAAAGGTAGCATTTGAGTATAATGATAGATTATATTTTTGCGAAAATGATGAAACTTTTGAAGGAGTAGATGAGAATT AAGCTCATAATATAGAATCC
Downstream 100 bases:
>100_bases TGATGTATATATAATAAGGCAGTTCTTACTTCTAAGAACTGCCTTTCATAATAGCAATAATCTTATTTATCTTATTACAT CATAAACTAATGGAATTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MCTIAIIDFNKFILGKTNCTNIILRDKWFEESSIINYNLNSQKLYLITKNCINKRSKLTICSLNNNSIINKQKFNLKDIY FDMNIFEYKNKVYSGSKKIVIFEKSKDFNLKIENILDNKDCFNINLKNVLNLWDYEIIEEDKLFIVYGDNIRPITSCIYN RLNNSVKYIKGTVAPVSLRSKELVFIE
Sequences:
>Translated_187_residues MCTIAIIDFNKFILGKTNCTNIILRDKWFEESSIINYNLNSQKLYLITKNCINKRSKLTICSLNNNSIINKQKFNLKDIY FDMNIFEYKNKVYSGSKKIVIFEKSKDFNLKIENILDNKDCFNINLKNVLNLWDYEIIEEDKLFIVYGDNIRPITSCIYN RLNNSVKYIKGTVAPVSLRSKELVFIE >Mature_187_residues MCTIAIIDFNKFILGKTNCTNIILRDKWFEESSIINYNLNSQKLYLITKNCINKRSKLTICSLNNNSIINKQKFNLKDIY FDMNIFEYKNKVYSGSKKIVIFEKSKDFNLKIENILDNKDCFNINLKNVLNLWDYEIIEEDKLFIVYGDNIRPITSCIYN RLNNSVKYIKGTVAPVSLRSKELVFIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22043; Mature: 22043
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTIAIIDFNKFILGKTNCTNIILRDKWFEESSIINYNLNSQKLYLITKNCINKRSKLTI CEEEEEEECCEEEEECCCCCEEEEECCCCCCCCEEEEECCCCEEEEEEHHHCCCCCEEEE CSLNNNSIINKQKFNLKDIYFDMNIFEYKNKVYSGSKKIVIFEKSKDFNLKIENILDNKD EEECCCCEECCCCCCEEEEEEECCCEEECHHHCCCCEEEEEEECCCCCEEEEEEECCCCC CFNINLKNVLNLWDYEIIEEDKLFIVYGDNIRPITSCIYNRLNNSVKYIKGTVAPVSLRS EEEEEHHHHHHHCCEEEECCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEECEEEECC KELVFIE CEEEEEC >Mature Secondary Structure MCTIAIIDFNKFILGKTNCTNIILRDKWFEESSIINYNLNSQKLYLITKNCINKRSKLTI CEEEEEEECCEEEEECCCCCEEEEECCCCCCCCEEEEECCCCEEEEEEHHHCCCCCEEEE CSLNNNSIINKQKFNLKDIYFDMNIFEYKNKVYSGSKKIVIFEKSKDFNLKIENILDNKD EEECCCCEECCCCCCEEEEEEECCCEEECHHHCCCCEEEEEEECCCCCEEEEEEECCCCC CFNINLKNVLNLWDYEIIEEDKLFIVYGDNIRPITSCIYNRLNNSVKYIKGTVAPVSLRS EEEEEHHHHHHHCCEEEECCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEECEEEECC KELVFIE CEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA