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The map label for this gene is xp55 [H]

Identifier: 28211534

GI number: 28211534

Start: 2021141

End: 2022811

Strand: Direct

Name: xp55 [H]

Synonym: CTC01900

Alternate gene names: 28211534

Gene position: 2021141-2022811 (Clockwise)

Preceding gene: 28211533

Following gene: 28211535

Centisome position: 72.2

GC content: 35.67

Gene sequence:

>1671_bases
ATGCACACGTTTATAAATCGTCTATTATCGAAGCACATTATGTTACCATTTATGACAATGATGCTATTGCTTCTTTTCTT
GTTATCAGGATGTACTTCAAGGTCACAACCCTCAGATGCAAATTCTCAGTCACTAAAGAAGTCGAATATACAATCAAAGA
ATAAGGATGAACTGATACTTGCTGTTGGTAAAACTGATACTGGTCAGTTTGATCCAAAAAAAGGTTGGGGAACTCACGCA
CAAATTCGTCTAACTCACAGTTCACTGCTTACCATTGACTCTAACCTGAACTTTGTTGGTGATCTTGCAAAATCCTACAA
AGTTAGTGAGGACGCCCTTACATGGACTTTTCCACTAAGAGATGACGTGAAATTTTCCAACGGTAAGCCAGTAACTGCGA
CGGATGTTAAATTTACATATGAAATGCTTAAAAAAGACGGTATTAAATTTGATTTATCATTTATTAAATCAATAGAAGCT
ATTGACGATTATAATGTGGCTATTACACTTAATGAACCACATTCCACTTTTGTAAGTCAACTCACTGAAATTGGTATTGT
ACCTAAAGATTTGTATGATAATAATTACTCAAGTAATCCTATTGGCTCAGGCCCATATAAAGTAGTTCAGTACAATGATG
GACAACAAATCATCATGGAATATAATCCTTATTGGTATGGTAAGAAACCTCAGTTTAAAAAGCTGACATTCCTCCTTCTT
GAAGAAGATGCAGCCCTTGCAGCTGCAAAGGCTGGACAAGCCGATATTGTCTATGTTCCGCCAACGTTTGCAAAACAAAC
AGTAGATGGAATGACACTTCGAGCCTTTGAAAGTATTGATTCACGTGGTATTACTATGCCAACACAAAAAAGTGGAGGAA
AAGGTTTAATAAACAGTAATGAAGTTGAGGTAGGAAATGATGTTACTTCTGATTTAGCTATTCGAAAAGCACTAAGTATA
GGGCTTAATCGTAAAGATATAGTGGATATTGCATTAAATGGATATGGTAAAGTAGCATACTCCTTATGCGATTATATGCC
TTGGTTTAATCAAGAAACCATTGTAAAAGGTGGAAATATTGAGGAAGCAAAAAAAATTCTAGCAAGTGCTGGGTGGATAG
ACACTGACAACGATGGAATTCTAGAAAAGAATGGACTCAAAGCTGAATTTAATCTATATTTCAGTTCTAGTGATCAACTT
CGTAGTGACCTTTCCTTAGCTGTAGCAGATATGGCACGAAATATAGGTATTAAAATCAATGCAATAGGAGCAACTTGGGA
TGAAATCTATATCAAAGGTAAAGCAAATGCAGTTATGTGGGGTGGCGGACGACATCATGCTCACCAACTATACACTATGT
ACTCTCCTAAAGTAATTAACCAAGGATATAATAATTTGACTGTTTATAAGAATCCTAAGGTAGAAGAGTATTTGGATAAA
GCTATGCATGCATCTACACAAGAAAAAGCTAATAAGTATTGGAAATTGGCTCAATGGGATGGGAAAACAGGATTTAGTTG
TCTTGGAGATGTCCCAATTATCTGGTTGGCACGTGTAGATCATCTATATTTGGCCAATAAAAATCTTGATTTAGGTAAAC
AACCTATTCATTCTCATGGTCATGAATGGGCATTATTCAGCAATATAACAGAATGGACATGGAATAAATAA

Upstream 100 bases:

>100_bases
TATTTGTGATTAACTCTGTTTGTGCATGAGAATCAAATGATTCTGCATAAACACACCACACAAATAAGAACAATAATTTT
ATTATGAGGAGGTAATCAAA

Downstream 100 bases:

>100_bases
TTAAATTAAATGTAAATTTGGAAAGGGACTTTTACGGGAATCATCTATTTTCGTGAAATCCCTTCTATCCATGGAAAGGA
GTGTTTATCATGGCAAAAAA

Product: periplasmic dipeptide transport protein precursor

Products: Ni2; [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 556; Mature: 556

Protein sequence:

>556_residues
MHTFINRLLSKHIMLPFMTMMLLLLFLLSGCTSRSQPSDANSQSLKKSNIQSKNKDELILAVGKTDTGQFDPKKGWGTHA
QIRLTHSSLLTIDSNLNFVGDLAKSYKVSEDALTWTFPLRDDVKFSNGKPVTATDVKFTYEMLKKDGIKFDLSFIKSIEA
IDDYNVAITLNEPHSTFVSQLTEIGIVPKDLYDNNYSSNPIGSGPYKVVQYNDGQQIIMEYNPYWYGKKPQFKKLTFLLL
EEDAALAAAKAGQADIVYVPPTFAKQTVDGMTLRAFESIDSRGITMPTQKSGGKGLINSNEVEVGNDVTSDLAIRKALSI
GLNRKDIVDIALNGYGKVAYSLCDYMPWFNQETIVKGGNIEEAKKILASAGWIDTDNDGILEKNGLKAEFNLYFSSSDQL
RSDLSLAVADMARNIGIKINAIGATWDEIYIKGKANAVMWGGGRHHAHQLYTMYSPKVINQGYNNLTVYKNPKVEEYLDK
AMHASTQEKANKYWKLAQWDGKTGFSCLGDVPIIWLARVDHLYLANKNLDLGKQPIHSHGHEWALFSNITEWTWNK

Sequences:

>Translated_556_residues
MHTFINRLLSKHIMLPFMTMMLLLLFLLSGCTSRSQPSDANSQSLKKSNIQSKNKDELILAVGKTDTGQFDPKKGWGTHA
QIRLTHSSLLTIDSNLNFVGDLAKSYKVSEDALTWTFPLRDDVKFSNGKPVTATDVKFTYEMLKKDGIKFDLSFIKSIEA
IDDYNVAITLNEPHSTFVSQLTEIGIVPKDLYDNNYSSNPIGSGPYKVVQYNDGQQIIMEYNPYWYGKKPQFKKLTFLLL
EEDAALAAAKAGQADIVYVPPTFAKQTVDGMTLRAFESIDSRGITMPTQKSGGKGLINSNEVEVGNDVTSDLAIRKALSI
GLNRKDIVDIALNGYGKVAYSLCDYMPWFNQETIVKGGNIEEAKKILASAGWIDTDNDGILEKNGLKAEFNLYFSSSDQL
RSDLSLAVADMARNIGIKINAIGATWDEIYIKGKANAVMWGGGRHHAHQLYTMYSPKVINQGYNNLTVYKNPKVEEYLDK
AMHASTQEKANKYWKLAQWDGKTGFSCLGDVPIIWLARVDHLYLANKNLDLGKQPIHSHGHEWALFSNITEWTWNK
>Mature_556_residues
MHTFINRLLSKHIMLPFMTMMLLLLFLLSGCTSRSQPSDANSQSLKKSNIQSKNKDELILAVGKTDTGQFDPKKGWGTHA
QIRLTHSSLLTIDSNLNFVGDLAKSYKVSEDALTWTFPLRDDVKFSNGKPVTATDVKFTYEMLKKDGIKFDLSFIKSIEA
IDDYNVAITLNEPHSTFVSQLTEIGIVPKDLYDNNYSSNPIGSGPYKVVQYNDGQQIIMEYNPYWYGKKPQFKKLTFLLL
EEDAALAAAKAGQADIVYVPPTFAKQTVDGMTLRAFESIDSRGITMPTQKSGGKGLINSNEVEVGNDVTSDLAIRKALSI
GLNRKDIVDIALNGYGKVAYSLCDYMPWFNQETIVKGGNIEEAKKILASAGWIDTDNDGILEKNGLKAEFNLYFSSSDQL
RSDLSLAVADMARNIGIKINAIGATWDEIYIKGKANAVMWGGGRHHAHQLYTMYSPKVINQGYNNLTVYKNPKVEEYLDK
AMHASTQEKANKYWKLAQWDGKTGFSCLGDVPIIWLARVDHLYLANKNLDLGKQPIHSHGHEWALFSNITEWTWNK

Specific function: Required for transport of an unidentified substrate [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789887, Length=371, Percent_Identity=26.6846361185984, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1787762, Length=158, Percent_Identity=36.7088607594937, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1787052, Length=478, Percent_Identity=23.0125523012552, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1789966, Length=440, Percent_Identity=24.5454545454545, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 62236; Mature: 62236

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01040 SBP_BACTERIAL_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTFINRLLSKHIMLPFMTMMLLLLFLLSGCTSRSQPSDANSQSLKKSNIQSKNKDELIL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEE
AVGKTDTGQFDPKKGWGTHAQIRLTHSSLLTIDSNLNFVGDLAKSYKVSEDALTWTFPLR
EECCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCHHHHHHHHCCCCCCCEEEEECCC
DDVKFSNGKPVTATDVKFTYEMLKKDGIKFDLSFIKSIEAIDDYNVAITLNEPHSTFVSQ
CCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCEEEEEECCCHHHHHHH
LTEIGIVPKDLYDNNYSSNPIGSGPYKVVQYNDGQQIIMEYNPYWYGKKPQFKKLTFLLL
HHHCCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCEECCCCCCCCEEEEEEE
EEDAALAAAKAGQADIVYVPPTFAKQTVDGMTLRAFESIDSRGITMPTQKSGGKGLINSN
ECCCHHHHHCCCCCCEEEECCCHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
EVEVGNDVTSDLAIRKALSIGLNRKDIVDIALNGYGKVAYSLCDYMPWFNQETIVKGGNI
CEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCEEEECCCH
EEAKKILASAGWIDTDNDGILEKNGLKAEFNLYFSSSDQLRSDLSLAVADMARNIGIKIN
HHHHHHHHHCCCCCCCCCCEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEE
AIGATWDEIYIKGKANAVMWGGGRHHAHQLYTMYSPKVINQGYNNLTVYKNPKVEEYLDK
EECCCEEEEEEEECCCEEEECCCCCCCCEEEEECCCHHHHCCCCCEEEEECCCHHHHHHH
AMHASTQEKANKYWKLAQWDGKTGFSCLGDVPIIWLARVDHLYLANKNLDLGKQPIHSHG
HHCCCHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEEHHCEEEEECCCCCCCCCCHHHCC
HEWALFSNITEWTWNK
CCEEEECCCCCCCCCC
>Mature Secondary Structure
MHTFINRLLSKHIMLPFMTMMLLLLFLLSGCTSRSQPSDANSQSLKKSNIQSKNKDELIL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEE
AVGKTDTGQFDPKKGWGTHAQIRLTHSSLLTIDSNLNFVGDLAKSYKVSEDALTWTFPLR
EECCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCHHHHHHHHCCCCCCCEEEEECCC
DDVKFSNGKPVTATDVKFTYEMLKKDGIKFDLSFIKSIEAIDDYNVAITLNEPHSTFVSQ
CCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCEEEEEECCCHHHHHHH
LTEIGIVPKDLYDNNYSSNPIGSGPYKVVQYNDGQQIIMEYNPYWYGKKPQFKKLTFLLL
HHHCCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCEECCCCCCCCEEEEEEE
EEDAALAAAKAGQADIVYVPPTFAKQTVDGMTLRAFESIDSRGITMPTQKSGGKGLINSN
ECCCHHHHHCCCCCCEEEECCCHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
EVEVGNDVTSDLAIRKALSIGLNRKDIVDIALNGYGKVAYSLCDYMPWFNQETIVKGGNI
CEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCEEEECCCH
EEAKKILASAGWIDTDNDGILEKNGLKAEFNLYFSSSDQLRSDLSLAVADMARNIGIKIN
HHHHHHHHHCCCCCCCCCCEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEE
AIGATWDEIYIKGKANAVMWGGGRHHAHQLYTMYSPKVINQGYNNLTVYKNPKVEEYLDK
EECCCEEEEEEEECCCEEEECCCCCCCCEEEEECCCHHHHCCCCCEEEEECCCHHHHHHH
AMHASTQEKANKYWKLAQWDGKTGFSCLGDVPIIWLARVDHLYLANKNLDLGKQPIHSHG
HHCCCHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEEHHCEEEEECCCCCCCCCCHHHCC
HEWALFSNITEWTWNK
CCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ni2; [Periplasm]; ATP; H2O [C]

Specific reaction: Ni2+ [Periplasm] + ATP + H2O = Ni2+ [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]