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The map label for this gene is yrkC [H]

Identifier: 28211533

GI number: 28211533

Start: 2019959

End: 2020540

Strand: Direct

Name: yrkC [H]

Synonym: CTC01899

Alternate gene names: 28211533

Gene position: 2019959-2020540 (Clockwise)

Preceding gene: 28211532

Following gene: 28211534

Centisome position: 72.16

GC content: 32.99

Gene sequence:

>582_bases
ATGTCTATGAAAGGAATGAGAGCTATGTATAACGCTTATAAAACATATCCCTGTTTTTATTTTATGAACTCCCCAAGATA
TAATCCACACATCACGTATAATACTTGTAGAACATATCCATGTCCTTACTACATGAGCACATCAAGATATAATTCAGAAA
TTGAATTAAAGGATTATGGGACAGAACCCTTTGTAGTTAATATTGAAGAAGCTACTAAACAAAATAATACTTATCGTACC
GCTTTATGGACAGGAACTCATTTGCAACTTACTTTGATGAGTATCAAAGTTGGAGAGGACATAGGTTTAGAAGTTCATCC
TAATCTTGATCAATTCATACGTATTGAAGAAGGACAGGGACTTGTTAAAATGGGTGATAGTGAAAATAATTTGGACTTTC
AAAGAAAAGTACATGATGATTTTGCATTTATTATTCCTGCTGGAAAATGGCACAATCTAATCAATACAGGCAATAAACCA
ATTAAATTGTATTCTATTTATGCACCACCTGAACATCCACATGGAACGGTTCATGAAACTAAAGCAATTGCAGAAGCTGC
TGAAAATAACGAAGATCATTAA

Upstream 100 bases:

>100_bases
AAAGTTTTATTTTTACTGGAATTGCATTTTTTATGTTAATATTTTTTCTCCCTAAATAAAGAAGCACACTCTACAAATAT
CTAACATATAATAATGTTAG

Downstream 100 bases:

>100_bases
TATCAAAATATAATGTAAGAATATGTAGAAACAGCCTCTTATGGTAATATCAAATAATCATAAAAGGCTGTTTTTTATGA
TTAAAGCAAATTTTAAATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MSMKGMRAMYNAYKTYPCFYFMNSPRYNPHITYNTCRTYPCPYYMSTSRYNSEIELKDYGTEPFVVNIEEATKQNNTYRT
ALWTGTHLQLTLMSIKVGEDIGLEVHPNLDQFIRIEEGQGLVKMGDSENNLDFQRKVHDDFAFIIPAGKWHNLINTGNKP
IKLYSIYAPPEHPHGTVHETKAIAEAAENNEDH

Sequences:

>Translated_193_residues
MSMKGMRAMYNAYKTYPCFYFMNSPRYNPHITYNTCRTYPCPYYMSTSRYNSEIELKDYGTEPFVVNIEEATKQNNTYRT
ALWTGTHLQLTLMSIKVGEDIGLEVHPNLDQFIRIEEGQGLVKMGDSENNLDFQRKVHDDFAFIIPAGKWHNLINTGNKP
IKLYSIYAPPEHPHGTVHETKAIAEAAENNEDH
>Mature_192_residues
SMKGMRAMYNAYKTYPCFYFMNSPRYNPHITYNTCRTYPCPYYMSTSRYNSEIELKDYGTEPFVVNIEEATKQNNTYRTA
LWTGTHLQLTLMSIKVGEDIGLEVHPNLDQFIRIEEGQGLVKMGDSENNLDFQRKVHDDFAFIIPAGKWHNLINTGNKPI
KLYSIYAPPEHPHGTVHETKAIAEAAENNEDH

Specific function: Unknown

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2 [H]

EC number: NA

Molecular weight: Translated: 22323; Mature: 22192

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMKGMRAMYNAYKTYPCFYFMNSPRYNPHITYNTCRTYPCPYYMSTSRYNSEIELKDYG
CCCCHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCCCEEECCCCCCEEEEEECC
TEPFVVNIEEATKQNNTYRTALWTGTHLQLTLMSIKVGEDIGLEVHPNLDQFIRIEEGQG
CCCEEEEEHHHHCCCCCEEEEEEECCEEEEEEEEEEECCCCCEEECCCHHHEEEEECCCC
LVKMGDSENNLDFQRKVHDDFAFIIPAGKWHNLINTGNKPIKLYSIYAPPEHPHGTVHET
EEEECCCCCCCCHHEEECCCEEEEEECCCCCHHHHCCCCCEEEEEEECCCCCCCCCHHHH
KAIAEAAENNEDH
HHHHHHHCCCCCC
>Mature Secondary Structure 
SMKGMRAMYNAYKTYPCFYFMNSPRYNPHITYNTCRTYPCPYYMSTSRYNSEIELKDYG
CCCHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCCCEEECCCCCCEEEEEECC
TEPFVVNIEEATKQNNTYRTALWTGTHLQLTLMSIKVGEDIGLEVHPNLDQFIRIEEGQG
CCCEEEEEHHHHCCCCCEEEEEEECCEEEEEEEEEEECCCCCEEECCCHHHEEEEECCCC
LVKMGDSENNLDFQRKVHDDFAFIIPAGKWHNLINTGNKPIKLYSIYAPPEHPHGTVHET
EEEECCCCCCCCHHEEECCCEEEEEECCCCCHHHHCCCCCEEEEEEECCCCCCCCCHHHH
KAIAEAAENNEDH
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]