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The map label for this gene is yohJ [C]

Identifier: 28211468

GI number: 28211468

Start: 1938591

End: 1938944

Strand: Direct

Name: yohJ [C]

Synonym: CTC01825

Alternate gene names: 28211468

Gene position: 1938591-1938944 (Clockwise)

Preceding gene: 28211467

Following gene: 28211469

Centisome position: 69.25

GC content: 28.81

Gene sequence:

>354_bases
TTGAAAATTTTGAGAGAACTTGGCATTGTTTTATTAATATGTGTTTTAGGAGAAGTTATTCATTCAATTTTTAAACTTTC
CATTCCCGGAAATGTAGTAGGTATGATACTTCTTTTTATACTTTTGTATTTTAAAGTAATTAAAGTAGATATGATATCTC
AAATAACTAACTTTCTTTTAGATCACCTTGCTTTTTTCTTCGTACCAGCAGGAGTTGGTATTTTATCTTGTATGCCTTTT
CTAAAGGGGAAATGGCTAGCTTTTTTAGTAATATGTATTATATCTACTATAATTGTAATAGGAGTAACTGGCTGGACGAT
ACAAGCCTATATAAGAAAGGTTGATAGAAAATGA

Upstream 100 bases:

>100_bases
TTTTGAAGATTATAACTTTCTTCTAGCTATGGTATTTTCATTAAAAAGGTACTAAAATAATTATTGTTAATACTATAACT
ATGACGAAAGAGGTGTAACT

Downstream 100 bases:

>100_bases
GAGATCTTACAAATTCTCCAATGATGAGTATAATCATATCAATAATCTGTTTTGAAATTGGATTATATATAAACAAGAAA
ACTAAAATTTCACTTTTAAA

Product: putative murein hydrolase exporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MKILRELGIVLLICVLGEVIHSIFKLSIPGNVVGMILLFILLYFKVIKVDMISQITNFLLDHLAFFFVPAGVGILSCMPF
LKGKWLAFLVICIISTIIVIGVTGWTIQAYIRKVDRK

Sequences:

>Translated_117_residues
MKILRELGIVLLICVLGEVIHSIFKLSIPGNVVGMILLFILLYFKVIKVDMISQITNFLLDHLAFFFVPAGVGILSCMPF
LKGKWLAFLVICIISTIIVIGVTGWTIQAYIRKVDRK
>Mature_117_residues
MKILRELGIVLLICVLGEVIHSIFKLSIPGNVVGMILLFILLYFKVIKVDMISQITNFLLDHLAFFFVPAGVGILSCMPF
LKGKWLAFLVICIISTIIVIGVTGWTIQAYIRKVDRK

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family [H]

Homologues:

Organism=Escherichia coli, GI1788463, Length=92, Percent_Identity=31.5217391304348, Blast_Score=60, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538
- InterPro:   IPR022957 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 13137; Mature: 13137

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILRELGIVLLICVLGEVIHSIFKLSIPGNVVGMILLFILLYFKVIKVDMISQITNFLL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DHLAFFFVPAGVGILSCMPFLKGKWLAFLVICIISTIIVIGVTGWTIQAYIRKVDRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKILRELGIVLLICVLGEVIHSIFKLSIPGNVVGMILLFILLYFKVIKVDMISQITNFLL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DHLAFFFVPAGVGILSCMPFLKGKWLAFLVICIISTIIVIGVTGWTIQAYIRKVDRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA