Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28211422

Identifier: 28211422

GI number: 28211422

Start: 1887448

End: 1887927

Strand: Direct

Name: 28211422

Synonym: CTC01774

Alternate gene names: NA

Gene position: 1887448-1887927 (Clockwise)

Preceding gene: 28211421

Following gene: 28211424

Centisome position: 67.43

GC content: 29.58

Gene sequence:

>480_bases
GTGACACAGCCTTTAAATAATGAACAATTTAGGTGGATTTTCTTCCGTTTTACTACAGAAAATGTTATATTTTATTTCGT
AGGCTCGTTTGCTTCGCTGAACATCGCTTGTTTTAGTGAAGAATTAAGATTTTCTGATCTAAGGAAGAAAATCAACCATA
GTTATTCATTATTAGTTGTTAGTTATTTCCACAAACCTTCTTTGTATGCCTTTAAAAGTTCTTCTATTTTACCCTTGCAT
CTAGTTCCATTACAACCACCAGATCCTGAACCAGTGATCTCGTTCACTTCTTCAATGGTTTTAGCACCCTTTCTTATAGC
ATCTTTTATTTTAGTTCTATTTATAGCTTTACAAATACAAACTTTAGTTAATTTATCTAACATTTTACTATCTAAATTCT
GCTCCAAATTTATCACTCCTCATTTGTATTTTGTGAATTTTTTTCTTGTTGTATTCTTTTATTATCATATCTTTTTATAG

Upstream 100 bases:

>100_bases
TATTCTTAGTAGCCTATGAAAATGGTAAAGAAATTTCTAAGGAACTTATTTATAAAGATATATATAACCCGGGAAATAAA
ATTGTGAAAAGAAAAAAGCT

Downstream 100 bases:

>100_bases
CTTTATCTGCATATAGTTTTATAACTGCCATTATTGGCACCGCTAATATCATTCCTACAGGTCCATAAAGACCTCCTCCT
AAAGTTACAGCAAATATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MTQPLNNEQFRWIFFRFTTENVIFYFVGSFASLNIACFSEELRFSDLRKKINHSYSLLVVSYFHKPSLYAFKSSSILPLH
LVPLQPPDPEPVISFTSSMVLAPFLIASFILVLFIALQIQTLVNLSNILLSKFCSKFITPHLYFVNFFLVVFFYYHIFL

Sequences:

>Translated_159_residues
MTQPLNNEQFRWIFFRFTTENVIFYFVGSFASLNIACFSEELRFSDLRKKINHSYSLLVVSYFHKPSLYAFKSSSILPLH
LVPLQPPDPEPVISFTSSMVLAPFLIASFILVLFIALQIQTLVNLSNILLSKFCSKFITPHLYFVNFFLVVFFYYHIFL
>Mature_158_residues
TQPLNNEQFRWIFFRFTTENVIFYFVGSFASLNIACFSEELRFSDLRKKINHSYSLLVVSYFHKPSLYAFKSSSILPLHL
VPLQPPDPEPVISFTSSMVLAPFLIASFILVLFIALQIQTLVNLSNILLSKFCSKFITPHLYFVNFFLVVFFYYHIFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18601; Mature: 18470

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPLNNEQFRWIFFRFTTENVIFYFVGSFASLNIACFSEELRFSDLRKKINHSYSLLVV
CCCCCCCCCEEEEEEEEECCCEEEEEECCHHHEEHEEHHHHHHHHHHHHHHCCCCEEEEE
SYFHKPSLYAFKSSSILPLHLVPLQPPDPEPVISFTSSMVLAPFLIASFILVLFIALQIQ
EECCCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLVNLSNILLSKFCSKFITPHLYFVNFFLVVFFYYHIFL
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TQPLNNEQFRWIFFRFTTENVIFYFVGSFASLNIACFSEELRFSDLRKKINHSYSLLVV
CCCCCCCCEEEEEEEEECCCEEEEEECCHHHEEHEEHHHHHHHHHHHHHHCCCCEEEEE
SYFHKPSLYAFKSSSILPLHLVPLQPPDPEPVISFTSSMVLAPFLIASFILVLFIALQIQ
EECCCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLVNLSNILLSKFCSKFITPHLYFVNFFLVVFFYYHIFL
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA