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The map label for this gene is vanW [H]

Identifier: 28211421

GI number: 28211421

Start: 1886063

End: 1887451

Strand: Direct

Name: vanW [H]

Synonym: CTC01773

Alternate gene names: 28211421

Gene position: 1886063-1887451 (Clockwise)

Preceding gene: 28211413

Following gene: 28211422

Centisome position: 67.38

GC content: 25.2

Gene sequence:

>1389_bases
ATGTATTTAGTAAAAAATATATGCATCGGAGGTGTATGTGGAATGAAAAAACTTTCTATATGGCATATATTAATTTTTAT
CTTAATATTTTTTTCCTTGGGCTTTTATATATTTTTACTTTATACTGTTAAAAATTTAAATGATAAAATATATCCAGGTG
TCTCTGTTAATAATATAGATTTATCAGGTAAAACAAAAAAAGAAGCAGCTTCTATAATAGAAAAAAGTTTAACAAATAAT
ATTAAGGGTGCTTTTAAATTAAAAAGTTCTAATAAAACTTATGTAGTTTCTTTTGAGGATTTAAATTTAAAGCATGATTT
AAATTCAACAGTAGAAGAAGCCTTCTCCTATGGAAAAAATTTTTCATCCTTTAAGAAATTTTCTCTTTTAATGAATTCTA
AACCTGTAAATATATCTTCTAAAGTATTATATAATAAAAATAAACTTCAAAATTCTATTTTCTCCATAGAAAAGGAGATA
AATAAAAATGCCATAGATGCTAAAATCAATGGCATTACAAGTGGTGTATTATCTTTTACTCCCGGTGTTGAAGGTCATAG
ATTAAATAAGGAAGATCTCTTAGAGGAAATAAATGGAAATTTAAGCACTTTACAAAATCCAAATTCCATAGTAGAAATTA
AACTAAAAGTAGATACTTATCCACCTAAAATTAATGATAAGAACCTTAGAAAGATAAATTCTTTAGTATCTTCTTTTTCC
ACAACCTATGAAAATTCATCTAAAGAAAGAAAAAATAATATTAAATTAGCTACAAATTCTATAGATGGAACTTTATTATT
ACCTGGAGATGTTTTTAGCTTTAATGAAGTTGTAGGTAATCCAACTACAGAAAAAGGATACAAAGAATCTAATATCATAG
TAAACAATAAATTGGAAAAAGGTGTTGGTGGGGGACTTTGTCAGGTATCAACTACTTTATACAATTCTATAATAAGAAGT
AATATAAAATCTTTAGAGAGAAAAAATCATTCTATAATACCCTCTTATGTAGAACCTGGATTGGATTCCACTGTAAGCTA
TGGAAATATAGATTATAAATTTAAAAATACTTTGACCTATCCTATTTATATAGAAGGTATTGCTAATAATGAGAAAGTAA
CTTTTAATATATACTCTAATTCTTCATTAAATAAAATAAAATACGATCTAATCAGTGAAGTCCATGACAAAATTCCTTTT
AAAACAGTTTATGAAAAAGATGATAACTTACCTTTAAATTCAGAAAAAATTTCTCAGAATGGAAGCTTTGGTTGTAGGGT
AAATGTATTCTTAGTAGCCTATGAAAATGGTAAAGAAATTTCTAAGGAACTTATTTATAAAGATATATATAACCCGGGAA
ATAAAATTGTGAAAAGAAAAAAGCTGTGA

Upstream 100 bases:

>100_bases
AAGCTTCTCATTTTATCCTCTATCATATTAAGCCCTCCACTAAATTTTGGTTGTTGTTTATTTAATTATATCATATAAAG
ACAATTTATAAATAAATTTT

Downstream 100 bases:

>100_bases
CACAGCCTTTAAATAATGAACAATTTAGGTGGATTTTCTTCCGTTTTACTACAGAAAATGTTATATTTTATTTCGTAGGC
TCGTTTGCTTCGCTGAACAT

Product: vancomycin B-type resistance protein vanW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MYLVKNICIGGVCGMKKLSIWHILIFILIFFSLGFYIFLLYTVKNLNDKIYPGVSVNNIDLSGKTKKEAASIIEKSLTNN
IKGAFKLKSSNKTYVVSFEDLNLKHDLNSTVEEAFSYGKNFSSFKKFSLLMNSKPVNISSKVLYNKNKLQNSIFSIEKEI
NKNAIDAKINGITSGVLSFTPGVEGHRLNKEDLLEEINGNLSTLQNPNSIVEIKLKVDTYPPKINDKNLRKINSLVSSFS
TTYENSSKERKNNIKLATNSIDGTLLLPGDVFSFNEVVGNPTTEKGYKESNIIVNNKLEKGVGGGLCQVSTTLYNSIIRS
NIKSLERKNHSIIPSYVEPGLDSTVSYGNIDYKFKNTLTYPIYIEGIANNEKVTFNIYSNSSLNKIKYDLISEVHDKIPF
KTVYEKDDNLPLNSEKISQNGSFGCRVNVFLVAYENGKEISKELIYKDIYNPGNKIVKRKKL

Sequences:

>Translated_462_residues
MYLVKNICIGGVCGMKKLSIWHILIFILIFFSLGFYIFLLYTVKNLNDKIYPGVSVNNIDLSGKTKKEAASIIEKSLTNN
IKGAFKLKSSNKTYVVSFEDLNLKHDLNSTVEEAFSYGKNFSSFKKFSLLMNSKPVNISSKVLYNKNKLQNSIFSIEKEI
NKNAIDAKINGITSGVLSFTPGVEGHRLNKEDLLEEINGNLSTLQNPNSIVEIKLKVDTYPPKINDKNLRKINSLVSSFS
TTYENSSKERKNNIKLATNSIDGTLLLPGDVFSFNEVVGNPTTEKGYKESNIIVNNKLEKGVGGGLCQVSTTLYNSIIRS
NIKSLERKNHSIIPSYVEPGLDSTVSYGNIDYKFKNTLTYPIYIEGIANNEKVTFNIYSNSSLNKIKYDLISEVHDKIPF
KTVYEKDDNLPLNSEKISQNGSFGCRVNVFLVAYENGKEISKELIYKDIYNPGNKIVKRKKL
>Mature_462_residues
MYLVKNICIGGVCGMKKLSIWHILIFILIFFSLGFYIFLLYTVKNLNDKIYPGVSVNNIDLSGKTKKEAASIIEKSLTNN
IKGAFKLKSSNKTYVVSFEDLNLKHDLNSTVEEAFSYGKNFSSFKKFSLLMNSKPVNISSKVLYNKNKLQNSIFSIEKEI
NKNAIDAKINGITSGVLSFTPGVEGHRLNKEDLLEEINGNLSTLQNPNSIVEIKLKVDTYPPKINDKNLRKINSLVSSFS
TTYENSSKERKNNIKLATNSIDGTLLLPGDVFSFNEVVGNPTTEKGYKESNIIVNNKLEKGVGGGLCQVSTTLYNSIIRS
NIKSLERKNHSIIPSYVEPGLDSTVSYGNIDYKFKNTLTYPIYIEGIANNEKVTFNIYSNSSLNKIKYDLISEVHDKIPF
KTVYEKDDNLPLNSEKISQNGSFGCRVNVFLVAYENGKEISKELIYKDIYNPGNKIVKRKKL

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 51924; Mature: 51924

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLVKNICIGGVCGMKKLSIWHILIFILIFFSLGFYIFLLYTVKNLNDKIYPGVSVNNID
CEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
LSGKTKKEAASIIEKSLTNNIKGAFKLKSSNKTYVVSFEDLNLKHDLNSTVEEAFSYGKN
CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCC
FSSFKKFSLLMNSKPVNISSKVLYNKNKLQNSIFSIEKEINKNAIDAKINGITSGVLSFT
HHHHHHHHHHCCCCCCCCCHHEEECHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHCCC
PGVEGHRLNKEDLLEEINGNLSTLQNPNSIVEIKLKVDTYPPKINDKNLRKINSLVSSFS
CCCCCCCCCHHHHHHHHCCCHHHCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHH
TTYENSSKERKNNIKLATNSIDGTLLLPGDVFSFNEVVGNPTTEKGYKESNIIVNNKLEK
HHHCCCCHHHCCCEEEEEECCCCEEEECCCCCCHHHHHCCCCCCCCCCCCCEEEECCCCC
GVGGGLCQVSTTLYNSIIRSNIKSLERKNHSIIPSYVEPGLDSTVSYGNIDYKFKNTLTY
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEECCCEEEEECCEEEE
PIYIEGIANNEKVTFNIYSNSSLNKIKYDLISEVHDKIPFKTVYEKDDNLPLNSEKISQN
EEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCC
GSFGCRVNVFLVAYENGKEISKELIYKDIYNPGNKIVKRKKL
CCCEEEEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHCCCC
>Mature Secondary Structure
MYLVKNICIGGVCGMKKLSIWHILIFILIFFSLGFYIFLLYTVKNLNDKIYPGVSVNNID
CEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
LSGKTKKEAASIIEKSLTNNIKGAFKLKSSNKTYVVSFEDLNLKHDLNSTVEEAFSYGKN
CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCC
FSSFKKFSLLMNSKPVNISSKVLYNKNKLQNSIFSIEKEINKNAIDAKINGITSGVLSFT
HHHHHHHHHHCCCCCCCCCHHEEECHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHCCC
PGVEGHRLNKEDLLEEINGNLSTLQNPNSIVEIKLKVDTYPPKINDKNLRKINSLVSSFS
CCCCCCCCCHHHHHHHHCCCHHHCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHH
TTYENSSKERKNNIKLATNSIDGTLLLPGDVFSFNEVVGNPTTEKGYKESNIIVNNKLEK
HHHCCCCHHHCCCEEEEEECCCCEEEECCCCCCHHHHHCCCCCCCCCCCCCEEEECCCCC
GVGGGLCQVSTTLYNSIIRSNIKSLERKNHSIIPSYVEPGLDSTVSYGNIDYKFKNTLTY
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEECCCEEEEECCEEEE
PIYIEGIANNEKVTFNIYSNSSLNKIKYDLISEVHDKIPFKTVYEKDDNLPLNSEKISQN
EEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCC
GSFGCRVNVFLVAYENGKEISKELIYKDIYNPGNKIVKRKKL
CCCEEEEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]