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The map label for this gene is ywhC [H]

Identifier: 28210510

GI number: 28210510

Start: 839901

End: 840542

Strand: Direct

Name: ywhC [H]

Synonym: CTC00793

Alternate gene names: 28210510

Gene position: 839901-840542 (Clockwise)

Preceding gene: 28210509

Following gene: 28210511

Centisome position: 30.0

GC content: 29.6

Gene sequence:

>642_bases
GTGATTGTTTTGACAGGAAAGTTATTAGCAAAGATTTTAATTATACCAGCAATTTTAATAGGATTTACATTTCATGAATT
TGCCCATGCTATAGTTGCCGATAGGTTAGGAGATAAAACACCAAAATTTCAAGGAAGACTATCTTTAAATCCAATAGTTC
ATATTGATCCCATAGGATTTATTATGATATTATTAGTTGGATTTGGATGGGCTAAACCAGTACAAGTGAACCCATCGGCC
TTTAAAAATTATTATAAGGATGATTTAAAAGTTTCCATAGCAGGACCTATATCCAATTTACTTATAGCTTTTATATTTGG
TGGAATTATGTTTCTTATGGGGAAATTTACTCCTGTATATGGAGGGCAAGTGTTTGGTATATTATATTTAATAGTGGATT
TTACCATAAGTATTAATTGCATGTTAGCTTTTTTTAATTTGATGCCATTACCAGGTTTAGATGGGTTTCATATATTAAGA
GATTTATTTCCAAGGAAATTTTATAAGTATGGAGAGCAAATATATAGATATCAGATGTTCATACTCATGATTTTTATATT
GACACCATTATCTAACTATTTAGTTTGGAAACCTGCTAACGTGACCTATGGATTAATACTTAGACTATTCAATATTATCT
AG

Upstream 100 bases:

>100_bases
AAGTGAAAATAAATTAATAAAAACTAAATTTAATTAGTTATAAACTCACTGTAAGTAATTTGCAGTGAGTTTTTAACTAA
TATAATAAAAATTAAAGAAG

Downstream 100 bases:

>100_bases
TAGGAAATAGCTAATAGTCATTCACTAAGTAGAGGAGGATTTTATGCGACTTAGAAAAAAGTGGTGGGCTAGACCAGAAA
TGGAGGCTTCATCTTTAGTA

Product: metal dependent protease domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MIVLTGKLLAKILIIPAILIGFTFHEFAHAIVADRLGDKTPKFQGRLSLNPIVHIDPIGFIMILLVGFGWAKPVQVNPSA
FKNYYKDDLKVSIAGPISNLLIAFIFGGIMFLMGKFTPVYGGQVFGILYLIVDFTISINCMLAFFNLMPLPGLDGFHILR
DLFPRKFYKYGEQIYRYQMFILMIFILTPLSNYLVWKPANVTYGLILRLFNII

Sequences:

>Translated_213_residues
MIVLTGKLLAKILIIPAILIGFTFHEFAHAIVADRLGDKTPKFQGRLSLNPIVHIDPIGFIMILLVGFGWAKPVQVNPSA
FKNYYKDDLKVSIAGPISNLLIAFIFGGIMFLMGKFTPVYGGQVFGILYLIVDFTISINCMLAFFNLMPLPGLDGFHILR
DLFPRKFYKYGEQIYRYQMFILMIFILTPLSNYLVWKPANVTYGLILRLFNII
>Mature_213_residues
MIVLTGKLLAKILIIPAILIGFTFHEFAHAIVADRLGDKTPKFQGRLSLNPIVHIDPIGFIMILLVGFGWAKPVQVNPSA
FKNYYKDDLKVSIAGPISNLLIAFIFGGIMFLMGKFTPVYGGQVFGILYLIVDFTISINCMLAFFNLMPLPGLDGFHILR
DLFPRKFYKYGEQIYRYQMFILMIFILTPLSNYLVWKPANVTYGLILRLFNII

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 24191; Mature: 24191

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVLTGKLLAKILIIPAILIGFTFHEFAHAIVADRLGDKTPKFQGRLSLNPIVHIDPIGF
CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEECHHHH
IMILLVGFGWAKPVQVNPSAFKNYYKDDLKVSIAGPISNLLIAFIFGGIMFLMGKFTPVY
HHHHHHHCCCCCCCEECHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCC
GGQVFGILYLIVDFTISINCMLAFFNLMPLPGLDGFHILRDLFPRKFYKYGEQIYRYQMF
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ILMIFILTPLSNYLVWKPANVTYGLILRLFNII
HHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHC
>Mature Secondary Structure
MIVLTGKLLAKILIIPAILIGFTFHEFAHAIVADRLGDKTPKFQGRLSLNPIVHIDPIGF
CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEECHHHH
IMILLVGFGWAKPVQVNPSAFKNYYKDDLKVSIAGPISNLLIAFIFGGIMFLMGKFTPVY
HHHHHHHCCCCCCCEECHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCC
GGQVFGILYLIVDFTISINCMLAFFNLMPLPGLDGFHILRDLFPRKFYKYGEQIYRYQMF
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ILMIFILTPLSNYLVWKPANVTYGLILRLFNII
HHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]