| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210509
Identifier: 28210509
GI number: 28210509
Start: 838806
End: 839837
Strand: Direct
Name: 28210509
Synonym: CTC00792
Alternate gene names: NA
Gene position: 838806-839837 (Clockwise)
Preceding gene: 28210508
Following gene: 28210510
Centisome position: 29.97
GC content: 26.84
Gene sequence:
>1032_bases ATGAAAAGATTTAAAAAAGTATTTGCATGGATAATATTATCCTTAATAGTTCAGAGTTCTATGTATTTTTATATAGATAA ATATTATTTAACTAATAATACTAAATTAAAAGCCACTAAGGTTGAGAAAAAGAATAATGATGAAAAACCAGATTTAGAAA TAAAATTACCTGATAATGCTAAGAATATTAATATGTCTTTTGATGGTAAATATGCTGCATACTATGATGGTGATATTTTG AAAGTATTAGATACTAAAACTAATGAGGAAAGAGATATAGCCTTCGATGAAGGTACAGATTTATCCTATTATAAATGGTT ATCTGATAGAAATAGAATGTTGATTGCAGAAAAACACAAAAGTGAAAATGGAGGATATAGATTTAAATTATCATACTATG ACGTAGATAAAGATACCAAAGAAGAATTTAAGGATCTAACTTGGGGAGACGAAGGCTCCATTGTGGAGGATATTCAAGAG TCTACAATAACAAATGTAATGTATGTAAAAGTTTCTAGAGGCGGAGGAAATAGTAGGTTATATTGGATCAATATAATGGC AGAAATGAAAAGAGTGCCTACTAAAGTTCAAATGATAGGAGATATAGCTTTAATTTATCATGAAGATAAACTTTTATATG AAAGTATGACCTATAATAAAATATATGTTACTAACAAAGAAGGAACAATAGATATAGAAGGAGTAGAAAAACCTAAATTA CTAGGAGTAGATATAGACGATAATGTATATATAGGTAAAAAAGAAAATGATAAAATATCAAAAGTTTATTATGGGAATTT AGAAACTCCTACAAATCAGTGGAGGTCAGTTCCTTTTGATCAGCCTATAGAAGAAAAAGATGTTCATATAACAAAAGAAG GTAAAGTTTTAATAAATGATAATCTAAACGGAATAGTTAAAGATGTGGCAACAGGTAAGGAAACTAAATATAAAGGTAAA TTTCTTCAAATATACGAAGGTGGAGTTTCTTCTATAAGTGAAAATAAATTAATAAAAACTAAATTTAATTAG
Upstream 100 bases:
>100_bases AATGTATTATGATGGTGAGGTAATTAATAATCCTTGTGATCCATTAGGTGAAAGATCAATACCTTCAGTTGTATATGTTG AACAATAAGGGAGAGTAACA
Downstream 100 bases:
>100_bases TTATAAACTCACTGTAAGTAATTTGCAGTGAGTTTTTAACTAATATAATAAAAATTAAAGAAGGTGATTGTTTTGACAGG AAAGTTATTAGCAAAGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MKRFKKVFAWIILSLIVQSSMYFYIDKYYLTNNTKLKATKVEKKNNDEKPDLEIKLPDNAKNINMSFDGKYAAYYDGDIL KVLDTKTNEERDIAFDEGTDLSYYKWLSDRNRMLIAEKHKSENGGYRFKLSYYDVDKDTKEEFKDLTWGDEGSIVEDIQE STITNVMYVKVSRGGGNSRLYWINIMAEMKRVPTKVQMIGDIALIYHEDKLLYESMTYNKIYVTNKEGTIDIEGVEKPKL LGVDIDDNVYIGKKENDKISKVYYGNLETPTNQWRSVPFDQPIEEKDVHITKEGKVLINDNLNGIVKDVATGKETKYKGK FLQIYEGGVSSISENKLIKTKFN
Sequences:
>Translated_343_residues MKRFKKVFAWIILSLIVQSSMYFYIDKYYLTNNTKLKATKVEKKNNDEKPDLEIKLPDNAKNINMSFDGKYAAYYDGDIL KVLDTKTNEERDIAFDEGTDLSYYKWLSDRNRMLIAEKHKSENGGYRFKLSYYDVDKDTKEEFKDLTWGDEGSIVEDIQE STITNVMYVKVSRGGGNSRLYWINIMAEMKRVPTKVQMIGDIALIYHEDKLLYESMTYNKIYVTNKEGTIDIEGVEKPKL LGVDIDDNVYIGKKENDKISKVYYGNLETPTNQWRSVPFDQPIEEKDVHITKEGKVLINDNLNGIVKDVATGKETKYKGK FLQIYEGGVSSISENKLIKTKFN >Mature_343_residues MKRFKKVFAWIILSLIVQSSMYFYIDKYYLTNNTKLKATKVEKKNNDEKPDLEIKLPDNAKNINMSFDGKYAAYYDGDIL KVLDTKTNEERDIAFDEGTDLSYYKWLSDRNRMLIAEKHKSENGGYRFKLSYYDVDKDTKEEFKDLTWGDEGSIVEDIQE STITNVMYVKVSRGGGNSRLYWINIMAEMKRVPTKVQMIGDIALIYHEDKLLYESMTYNKIYVTNKEGTIDIEGVEKPKL LGVDIDDNVYIGKKENDKISKVYYGNLETPTNQWRSVPFDQPIEEKDVHITKEGKVLINDNLNGIVKDVATGKETKYKGK FLQIYEGGVSSISENKLIKTKFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39798; Mature: 39798
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFKKVFAWIILSLIVQSSMYFYIDKYYLTNNTKLKATKVEKKNNDEKPDLEIKLPDNA CCHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCEEEEEEECCCCCCCCCCEEEECCCCC KNINMSFDGKYAAYYDGDILKVLDTKTNEERDIAFDEGTDLSYYKWLSDRNRMLIAEKHK CEEEEEECCCEEEEECCCEEEEEECCCCCCCCEEECCCCCCHHEEHHCCCCCEEEEECCC SENGGYRFKLSYYDVDKDTKEEFKDLTWGDEGSIVEDIQESTITNVMYVKVSRGGGNSRL CCCCCEEEEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEEEECCCCCCEE YWINIMAEMKRVPTKVQMIGDIALIYHEDKLLYESMTYNKIYVTNKEGTIDIEGVEKPKL EEEEEEHHHHHCCCEEEEEEEEEEEEECCCEEEEEECCCEEEEECCCCEEEECCCCCCEE LGVDIDDNVYIGKKENDKISKVYYGNLETPTNQWRSVPFDQPIEEKDVHITKEGKVLIND EEEECCCCEEECCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCCCCCEEEEECCCEEEEC NLNGIVKDVATGKETKYKGKFLQIYEGGVSSISENKLIKTKFN CCCHHHHHHHCCCCCEECCCEEEEEECCCCCCCCCCEEEEECC >Mature Secondary Structure MKRFKKVFAWIILSLIVQSSMYFYIDKYYLTNNTKLKATKVEKKNNDEKPDLEIKLPDNA CCHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCEEEEEEECCCCCCCCCCEEEECCCCC KNINMSFDGKYAAYYDGDILKVLDTKTNEERDIAFDEGTDLSYYKWLSDRNRMLIAEKHK CEEEEEECCCEEEEECCCEEEEEECCCCCCCCEEECCCCCCHHEEHHCCCCCEEEEECCC SENGGYRFKLSYYDVDKDTKEEFKDLTWGDEGSIVEDIQESTITNVMYVKVSRGGGNSRL CCCCCEEEEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEEEECCCCCCEE YWINIMAEMKRVPTKVQMIGDIALIYHEDKLLYESMTYNKIYVTNKEGTIDIEGVEKPKL EEEEEEHHHHHCCCEEEEEEEEEEEEECCCEEEEEECCCEEEEECCCCEEEECCCCCCEE LGVDIDDNVYIGKKENDKISKVYYGNLETPTNQWRSVPFDQPIEEKDVHITKEGKVLIND EEEECCCCEEECCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCCCCCEEEEECCCEEEEC NLNGIVKDVATGKETKYKGKFLQIYEGGVSSISENKLIKTKFN CCCHHHHHHHCCCCCEECCCEEEEEECCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA