The gene/protein map for NC_004557 is currently unavailable.
Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

Click here to switch to the map view.

The map label for this gene is 28210366

Identifier: 28210366

GI number: 28210366

Start: 656738

End: 657259

Strand: Direct

Name: 28210366

Synonym: CTC00637

Alternate gene names: NA

Gene position: 656738-657259 (Clockwise)

Preceding gene: 28210364

Following gene: 28210367

Centisome position: 23.46

GC content: 27.97

Gene sequence:

>522_bases
TTGGTAATTCCAGGTATGAAATCACTTATAGGATTATCAGGGCAAATAGCACAAAAAATCAATACCATAGATAATATTAC
TAAATTCAATTTAGACGGTATTCAAAATAATATGAAGCAATTAGCAGTAGCATCAAATGTTTATCGTAATATTGCTGTAG
AAACAACAATGCAGTTACAAAAAAAATTAGAACCTTTAAGAGCTGTTTCAAAGTGTGGATTATTAGATGTTCAAAAGAAA
GTTCAAAAAATTGGACTTCAAATGGGACTTGCTTCACAAGCAGTACAATCATATAGCTTTAAATATGATAAAATAATATC
TAATATAAATACCCCAAGAGAAGCACTAATAACTAATAATATACAGGGAATTAGGTCTGTGTTAACGGAGGCACAAGCTG
GTAGTAGGCTATTAGAGAGTCAGTTAAAAGGAATAAAACAATTTTTAAGTTCAACAACAAAATTTATATATAGAGATAAA
TTAATACATTTTGATAGCTTAAATGAGAATATTTTAAAATGA

Upstream 100 bases:

>100_bases
CAAAAAAATTATTACTCCTTTAAATAATGTATATTCACAAGTTGAGGACGTGGGAAAAATTTATTCGTAATATTTAAATA
GAATAAATAAATATCAAAGT

Downstream 100 bases:

>100_bases
ATAAGACCTTTTATTACAGACGTTAGTTCCAATTATTGAAGGTGTTATACGTGAATTTATGTTAAATAAATACAAGATGG
TTAATGTGAGATTTTATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MVIPGMKSLIGLSGQIAQKINTIDNITKFNLDGIQNNMKQLAVASNVYRNIAVETTMQLQKKLEPLRAVSKCGLLDVQKK
VQKIGLQMGLASQAVQSYSFKYDKIISNINTPREALITNNIQGIRSVLTEAQAGSRLLESQLKGIKQFLSSTTKFIYRDK
LIHFDSLNENILK

Sequences:

>Translated_173_residues
MVIPGMKSLIGLSGQIAQKINTIDNITKFNLDGIQNNMKQLAVASNVYRNIAVETTMQLQKKLEPLRAVSKCGLLDVQKK
VQKIGLQMGLASQAVQSYSFKYDKIISNINTPREALITNNIQGIRSVLTEAQAGSRLLESQLKGIKQFLSSTTKFIYRDK
LIHFDSLNENILK
>Mature_173_residues
MVIPGMKSLIGLSGQIAQKINTIDNITKFNLDGIQNNMKQLAVASNVYRNIAVETTMQLQKKLEPLRAVSKCGLLDVQKK
VQKIGLQMGLASQAVQSYSFKYDKIISNINTPREALITNNIQGIRSVLTEAQAGSRLLESQLKGIKQFLSSTTKFIYRDK
LIHFDSLNENILK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19297; Mature: 19297

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIPGMKSLIGLSGQIAQKINTIDNITKFNLDGIQNNMKQLAVASNVYRNIAVETTMQLQ
CCCCCHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKLEPLRAVSKCGLLDVQKKVQKIGLQMGLASQAVQSYSFKYDKIISNINTPREALITNN
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC
IQGIRSVLTEAQAGSRLLESQLKGIKQFLSSTTKFIYRDKLIHFDSLNENILK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC
>Mature Secondary Structure
MVIPGMKSLIGLSGQIAQKINTIDNITKFNLDGIQNNMKQLAVASNVYRNIAVETTMQLQ
CCCCCHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKLEPLRAVSKCGLLDVQKKVQKIGLQMGLASQAVQSYSFKYDKIISNINTPREALITNN
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC
IQGIRSVLTEAQAGSRLLESQLKGIKQFLSSTTKFIYRDKLIHFDSLNENILK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA